FFCP PHASE1:Hg19::chr7:13524410..13524415,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;5.50e-13;3!CL:0002174;7.22e-10;1!CL:0000501;7.22e-10;1!CL:0002563;1.81e-09;4!CL:0002251;3.36e-07;20 | |ontology_enrichment_celltype_v019=CL:0002178;5.50e-13;3!CL:0002174;7.22e-10;1!CL:0000501;7.22e-10;1!CL:0002563;1.81e-09;4!CL:0002251;3.36e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,5.51e-13,3;CL:0002174,8.24e-10,1;CL:0000501,8.24e-10,1;CL:0002563,1.28e-09,4;CL:0002251,2.94e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.24e-10;1!UBERON:0006298;7.22e-10;1 | |ontology_enrichment_development_v019=UBERON:0000358;3.24e-10;1!UBERON:0006298;7.22e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;1.82e-22;14!DOID:0060085;7.22e-10;1!DOID:4960;7.22e-10;1!DOID:3165;7.22e-10;1!DOID:0060121;7.22e-10;1!DOID:2438;7.22e-10;1!DOID:0070004;7.22e-10;1!DOID:4418;7.22e-10;1 | |ontology_enrichment_disease_v019=DOID:3119;1.82e-22;14!DOID:0060085;7.22e-10;1!DOID:4960;7.22e-10;1!DOID:3165;7.22e-10;1!DOID:0060121;7.22e-10;1!DOID:2438;7.22e-10;1!DOID:0070004;7.22e-10;1!DOID:4418;7.22e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,1.46e-22,14;DOID:0060085,4.44e-10,1;DOID:3165,4.44e-10,1;DOID:0060121,4.44e-10,1;DOID:2438,4.44e-10,1;DOID:4418,4.44e-10,1;DOID:4960,6.33e-10,1;DOID:0070004,6.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.93e-21!32;UBERON:0001893!7.53e-20!34;UBERON:0002619!9.43e-20!22;UBERON:0001950!1.44e-19!20;UBERON:0002791!1.08e-18!33;UBERON:0002020!5.50e-18!34;UBERON:0003528!5.50e-18!34;UBERON:0000956!6.45e-17!25;UBERON:0000203!6.45e-17!25;UBERON:0002780!1.69e-15!41;UBERON:0001890!1.69e-15!41;UBERON:0006240!1.69e-15!41;UBERON:0003080!5.38e-15!42;UBERON:0007023!7.93e-14!115;UBERON:0003056!8.51e-13!61;UBERON:0003075!1.10e-11!86;UBERON:0007284!1.10e-11!86;UBERON:0000200!3.04e-11!6;UBERON:0002346!8.08e-11!90;UBERON:0001049!1.20e-10!57;UBERON:0005068!1.20e-10!57;UBERON:0006241!1.20e-10!57;UBERON:0007135!1.20e-10!57;UBERON:0002616!4.27e-10!59;UBERON:0005743!1.15e-08!86;UBERON:0001017!1.40e-08!82;UBERON:0001871!1.59e-08!7;UBERON:0000955!1.76e-08!69;UBERON:0006238!1.76e-08!69;UBERON:0000073!6.37e-08!94;UBERON:0001016!6.37e-08!94;UBERON:0000153!4.55e-07!129;UBERON:0007811!4.55e-07!129;UBERON:0002771!6.08e-07!3;UBERON:0002420!6.44e-07!9;UBERON:0007245!6.44e-07!9;UBERON:0010009!6.44e-07!9;UBERON:0010011!6.44e-07!9;UBERON:0000454!6.44e-07!9 | |ontology_enrichment_uberon=UBERON:0001869!1.93e-21!32;UBERON:0001893!7.53e-20!34;UBERON:0002619!9.43e-20!22;UBERON:0001950!1.44e-19!20;UBERON:0002791!1.08e-18!33;UBERON:0002020!5.50e-18!34;UBERON:0003528!5.50e-18!34;UBERON:0000956!6.45e-17!25;UBERON:0000203!6.45e-17!25;UBERON:0002780!1.69e-15!41;UBERON:0001890!1.69e-15!41;UBERON:0006240!1.69e-15!41;UBERON:0003080!5.38e-15!42;UBERON:0007023!7.93e-14!115;UBERON:0003056!8.51e-13!61;UBERON:0003075!1.10e-11!86;UBERON:0007284!1.10e-11!86;UBERON:0000200!3.04e-11!6;UBERON:0002346!8.08e-11!90;UBERON:0001049!1.20e-10!57;UBERON:0005068!1.20e-10!57;UBERON:0006241!1.20e-10!57;UBERON:0007135!1.20e-10!57;UBERON:0002616!4.27e-10!59;UBERON:0005743!1.15e-08!86;UBERON:0001017!1.40e-08!82;UBERON:0001871!1.59e-08!7;UBERON:0000955!1.76e-08!69;UBERON:0006238!1.76e-08!69;UBERON:0000073!6.37e-08!94;UBERON:0001016!6.37e-08!94;UBERON:0000153!4.55e-07!129;UBERON:0007811!4.55e-07!129;UBERON:0002771!6.08e-07!3;UBERON:0002420!6.44e-07!9;UBERON:0007245!6.44e-07!9;UBERON:0010009!6.44e-07!9;UBERON:0010011!6.44e-07!9;UBERON:0000454!6.44e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;5.33e-18;2!UBERON:0000945;7.29e-17;5!UBERON:0010039;7.29e-17;5!UBERON:0001871;1.11e-11;6!UBERON:0001041;2.17e-10;14!UBERON:0003112;7.22e-10;1!UBERON:0001736;7.22e-10;1!UBERON:0011158;7.22e-10;1!UBERON:0003128;7.22e-10;1!UBERON:0001703;7.22e-10;1!UBERON:0002241;7.22e-10;1!UBERON:0001242;1.81e-09;4!UBERON:0001262;1.81e-09;4!UBERON:0004786;1.81e-09;4!UBERON:0004808;1.81e-09;4!UBERON:0001277;1.81e-09;4!UBERON:0005409;1.83e-09;22!UBERON:0004921;9.60e-08;33 | |ontology_enrichment_uberon_v019=UBERON:0002771;5.33e-18;2!UBERON:0000945;7.29e-17;5!UBERON:0010039;7.29e-17;5!UBERON:0001871;1.11e-11;6!UBERON:0001041;2.17e-10;14!UBERON:0003112;7.22e-10;1!UBERON:0001736;7.22e-10;1!UBERON:0011158;7.22e-10;1!UBERON:0003128;7.22e-10;1!UBERON:0001703;7.22e-10;1!UBERON:0002241;7.22e-10;1!UBERON:0001242;1.81e-09;4!UBERON:0001262;1.81e-09;4!UBERON:0004786;1.81e-09;4!UBERON:0004808;1.81e-09;4!UBERON:0001277;1.81e-09;4!UBERON:0005409;1.83e-09;22!UBERON:0004921;9.60e-08;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,8.24e-18,2;UBERON:0001871,1.22e-11,6;UBERON:0000945,9.61e-11,8;UBERON:0010039,9.61e-11,8;UBERON:0001736,6.91e-10,1;UBERON:0006298,6.91e-10,1;UBERON:0003112,9.82e-10,1;UBERON:0011158,9.82e-10,1;UBERON:0003128,9.82e-10,1;UBERON:0001703,9.82e-10,1;UBERON:0002241,9.82e-10,1;UBERON:0004761,9.82e-10,1;UBERON:0009617,9.82e-10,1;UBERON:0001242,1.28e-09,4;UBERON:0001262,1.28e-09,4;UBERON:0004786,1.28e-09,4;UBERON:0004808,1.28e-09,4;UBERON:0001277,1.28e-09,4;UBERON:0005409,2.09e-08,25 | |||
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| ||
|short_description=p@chr7:13524410..13524415,+ | |short_description=p@chr7:13524410..13524415,+ | ||
}} | }} |
Revision as of 21:32, 15 November 2012
Short description: | p@chr7:13524410..13524415, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:13524410..13524415, + |
Coexpression cluster: | C1985_gastric_signet_lymphangiectasia_Prostate_smallcell_Intestinal_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 5.51e-13 | 3 |
follicular cell of ovary | 8.24e-10 | 1 |
granulosa cell | 8.24e-10 | 1 |
intestinal epithelial cell | 1.28e-09 | 4 |
epithelial cell of alimentary canal | 2.94e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 8.24e-18 | 2 |
temporal lobe | 1.22e-11 | 6 |
stomach | 9.61e-11 | 8 |
food storage organ | 9.61e-11 | 8 |
submandibular gland | 6.91e-10 | 1 |
submandibular gland primordium | 6.91e-10 | 1 |
olfactory region | 9.82e-10 | 1 |
primary subdivision of skull | 9.82e-10 | 1 |
cranium | 9.82e-10 | 1 |
neurocranium | 9.82e-10 | 1 |
chondrocranium | 9.82e-10 | 1 |
cartilaginous neurocranium | 9.82e-10 | 1 |
head paraxial mesoderm | 9.82e-10 | 1 |
intestinal mucosa | 1.28e-09 | 4 |
wall of intestine | 1.28e-09 | 4 |
gastrointestinal system mucosa | 1.28e-09 | 4 |
gastrointestinal system epithelium | 1.28e-09 | 4 |
intestinal epithelium | 1.28e-09 | 4 |
gastrointestinal system | 2.09e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.46e-22 | 14 |
organ system benign neoplasm | 4.44e-10 | 1 |
skin benign neoplasm | 4.44e-10 | 1 |
integumentary system benign neoplasm | 4.44e-10 | 1 |
dermis tumor | 4.44e-10 | 1 |
cutaneous fibrous histiocytoma | 4.44e-10 | 1 |
bone marrow cancer | 6.33e-10 | 1 |
myeloma | 6.33e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.