FFCP PHASE1:Hg19::chr19:1064625..1064629,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002322!1.65e-20!5;CL:0000159!1.86e-13!2;CL:1000415!6.09e-13!2;CL:0000540!3.17e-10!6;CL:0000031!3.17e-10!6;CL:0000404!3.17e-10!6;CL:0000047!8.83e-08!8;CL:0000313!1.22e-07!1;CL:0002563!1.39e-07!4;CL:0000319!1.69e-07!1 | |ontology_enrichment_celltype=CL:0002322!1.65e-20!5;CL:0000159!1.86e-13!2;CL:1000415!6.09e-13!2;CL:0000540!3.17e-10!6;CL:0000031!3.17e-10!6;CL:0000404!3.17e-10!6;CL:0000047!8.83e-08!8;CL:0000313!1.22e-07!1;CL:0002563!1.39e-07!4;CL:0000319!1.69e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.17e-33;4!CL:0002253;9.86e-18;2!CL:0002231;2.74e-12;3!CL:0002076;3.41e-08;42!CL:0002188;5.54e-08;5!CL:0002251;1.42e-07;20!CL:0000540;8.72e-07;6!CL:0000404;8.72e-07;6 | |ontology_enrichment_celltype_v019=CL:0002563;1.17e-33;4!CL:0002253;9.86e-18;2!CL:0002231;2.74e-12;3!CL:0002076;3.41e-08;42!CL:0002188;5.54e-08;5!CL:0002251;1.42e-07;20!CL:0000540;8.72e-07;6!CL:0000404;8.72e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.88e-34,4;CL:0002253,7.67e-18,2;CL:0002231,3.24e-12,3;CL:0002188,5.35e-08,5;CL:0002076,8.72e-08,42;CL:0002251,1.38e-07,20;CL:0000540,8.48e-07,6;CL:0000031,8.48e-07,6;CL:0000404,8.48e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;8.72e-07;6 | |ontology_enrichment_development_v019=CL:0000031;8.72e-07;6 | ||
|ontology_enrichment_disease=DOID:1799!7.26e-08!1;DOID:10165!7.26e-08!1;DOID:1798!7.26e-08!1;DOID:2152!1.22e-07!1;DOID:3030!1.69e-07!1;DOID:3111!2.04e-07!1;DOID:3603!2.04e-07!1;DOID:178!2.17e-07!1;DOID:326!2.17e-07!1;DOID:3978!2.17e-07!1;DOID:3394!2.17e-07!1;DOID:5844!2.17e-07!1 | |ontology_enrichment_disease=DOID:1799!7.26e-08!1;DOID:10165!7.26e-08!1;DOID:1798!7.26e-08!1;DOID:2152!1.22e-07!1;DOID:3030!1.69e-07!1;DOID:3111!2.04e-07!1;DOID:3603!2.04e-07!1;DOID:178!2.17e-07!1;DOID:326!2.17e-07!1;DOID:3978!2.17e-07!1;DOID:3394!2.17e-07!1;DOID:5844!2.17e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002110!6.30e-09!3;UBERON:0006242!6.30e-09!3;UBERON:0004911!1.22e-07!1;UBERON:0001242!1.39e-07!4;UBERON:0001262!1.39e-07!4;UBERON:0004786!1.39e-07!4;UBERON:0004808!1.39e-07!4;UBERON:0001277!1.39e-07!4 | |ontology_enrichment_uberon=UBERON:0002110!6.30e-09!3;UBERON:0006242!6.30e-09!3;UBERON:0004911!1.22e-07!1;UBERON:0001242!1.39e-07!4;UBERON:0001262!1.39e-07!4;UBERON:0004786!1.39e-07!4;UBERON:0004808!1.39e-07!4;UBERON:0001277!1.39e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.17e-33;4!UBERON:0001262;1.17e-33;4!UBERON:0004786;1.17e-33;4!UBERON:0004808;1.17e-33;4!UBERON:0001277;1.17e-33;4!UBERON:0000485;9.48e-20;7!UBERON:0003929;9.48e-20;7!UBERON:0003350;2.01e-17;8!UBERON:0001052;1.50e-09;4!UBERON:0000160;2.61e-08;17!UBERON:0004907;6.78e-08;5!UBERON:0000344;1.42e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0001242;1.17e-33;4!UBERON:0001262;1.17e-33;4!UBERON:0004786;1.17e-33;4!UBERON:0004808;1.17e-33;4!UBERON:0001277;1.17e-33;4!UBERON:0000485;9.48e-20;7!UBERON:0003929;9.48e-20;7!UBERON:0003350;2.01e-17;8!UBERON:0001052;1.50e-09;4!UBERON:0000160;2.61e-08;17!UBERON:0004907;6.78e-08;5!UBERON:0000344;1.42e-07;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,9.88e-34,4;UBERON:0001262,9.88e-34,4;UBERON:0004786,9.88e-34,4;UBERON:0004808,9.88e-34,4;UBERON:0001277,9.88e-34,4;UBERON:0003350,1.85e-17,8;UBERON:0000485,1.22e-15,9;UBERON:0001052,1.32e-09,4;UBERON:0000160,2.51e-08,17;UBERON:0004907,6.13e-08,5;UBERON:0001046,6.36e-08,19;UBERON:0000344,1.38e-07,20 | |||
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|short_description=p8@ABCA7 | |short_description=p8@ABCA7 | ||
}} | }} |
Revision as of 23:58, 16 November 2012
Short description: | p8@ABCA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ABCA7_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000524383_5end |
EntrezGene: | ABCA7 |
HGNC: | 37 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.88e-34 | 4 |
epithelial cell of large intestine | 7.67e-18 | 2 |
epithelial cell of prostate | 3.24e-12 | 3 |
glomerular endothelial cell | 5.35e-08 | 5 |
endo-epithelial cell | 8.72e-08 | 42 |
epithelial cell of alimentary canal | 1.38e-07 | 20 |
neuron | 8.48e-07 | 6 |
neuroblast | 8.48e-07 | 6 |
electrically signaling cell | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 9.88e-34 | 4 |
wall of intestine | 9.88e-34 | 4 |
gastrointestinal system mucosa | 9.88e-34 | 4 |
gastrointestinal system epithelium | 9.88e-34 | 4 |
intestinal epithelium | 9.88e-34 | 4 |
epithelium of mucosa | 1.85e-17 | 8 |
simple columnar epithelium | 1.22e-15 | 9 |
rectum | 1.32e-09 | 4 |
intestine | 2.51e-08 | 17 |
lower digestive tract | 6.13e-08 | 5 |
hindgut | 6.36e-08 | 19 |
mucosa | 1.38e-07 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.