FFCP PHASE1:Hg19::chr20:6104217..6104228,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!4.52e-33!254;CL:0000223!9.51e-20!59;CL:0002076!1.81e-18!43;CL:0002251!2.06e-11!21;CL:0002368!5.96e-07!13 | |ontology_enrichment_celltype=CL:0000066!4.52e-33!254;CL:0000223!9.51e-20!59;CL:0002076!1.81e-18!43;CL:0002251!2.06e-11!21;CL:0002368!5.96e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002327;4.80e-12;4 | |ontology_enrichment_celltype_v019=CL:0002327;4.80e-12;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.73e-13,253;CL:0002327,3.49e-12,4;CL:0000223,3.35e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.70e-25!106;DOID:0050687!1.71e-21!143;DOID:1749!5.95e-13!14;DOID:162!8.92e-12!235;DOID:14566!1.45e-11!239 | |ontology_enrichment_disease=DOID:305!1.70e-25!106;DOID:0050687!1.71e-21!143;DOID:1749!5.95e-13!14;DOID:162!8.92e-12!235;DOID:14566!1.45e-11!239 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.45e-17;14!DOID:0050619;7.33e-07;1!DOID:1357;7.33e-07;1 | |ontology_enrichment_disease_v019=DOID:1749;1.45e-17;14!DOID:0050619;7.33e-07;1!DOID:1357;7.33e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,2.30e-17,14;DOID:305,1.37e-13,106;DOID:0050687,5.26e-09,143;DOID:0050619,5.90e-07,1;DOID:1357,5.90e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.71e-20!169;UBERON:0000925!1.71e-20!169;UBERON:0006595!1.71e-20!169;UBERON:0001007!4.18e-16!155;UBERON:0001555!4.18e-16!155;UBERON:0007026!4.18e-16!155;UBERON:0004921!8.32e-14!129;UBERON:0004185!8.32e-14!129;UBERON:0000077!8.77e-13!130;UBERON:0000344!5.56e-10!12;UBERON:0000160!2.00e-08!27;UBERON:0002075!4.43e-08!18;UBERON:0000466!1.09e-07!126;UBERON:0001004!1.10e-07!72;UBERON:0000161!1.16e-07!35;UBERON:0001041!1.22e-07!98;UBERON:0005409!1.33e-07!35;UBERON:0003729!1.70e-07!5;UBERON:0000464!3.07e-07!104;UBERON:0005911!3.16e-07!82;UBERON:0001045!9.06e-07!11 | |ontology_enrichment_uberon=UBERON:0004119!1.71e-20!169;UBERON:0000925!1.71e-20!169;UBERON:0006595!1.71e-20!169;UBERON:0001007!4.18e-16!155;UBERON:0001555!4.18e-16!155;UBERON:0007026!4.18e-16!155;UBERON:0004921!8.32e-14!129;UBERON:0004185!8.32e-14!129;UBERON:0000077!8.77e-13!130;UBERON:0000344!5.56e-10!12;UBERON:0000160!2.00e-08!27;UBERON:0002075!4.43e-08!18;UBERON:0000466!1.09e-07!126;UBERON:0001004!1.10e-07!72;UBERON:0000161!1.16e-07!35;UBERON:0001041!1.22e-07!98;UBERON:0005409!1.33e-07!35;UBERON:0003729!1.70e-07!5;UBERON:0000464!3.07e-07!104;UBERON:0005911!3.16e-07!82;UBERON:0001045!9.06e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;4.80e-12;4!UBERON:0000365;5.42e-10;5!UBERON:0005910;2.12e-08;6!UBERON:0001764;7.33e-07;1!UBERON:0001825;7.33e-07;1!UBERON:0002365;7.50e-07;31!UBERON:0002330;7.50e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0001911;4.80e-12;4!UBERON:0000365;5.42e-10;5!UBERON:0005910;2.12e-08;6!UBERON:0001764;7.33e-07;1!UBERON:0001825;7.33e-07;1!UBERON:0002365;7.50e-07;31!UBERON:0002330;7.50e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,3.49e-12,4;UBERON:0005333,3.49e-12,4;UBERON:0008425,3.49e-12,4;UBERON:0005311,3.49e-12,4;UBERON:0000365,2.43e-10,5;UBERON:0004119,1.39e-09,160;UBERON:0000925,1.39e-09,160;UBERON:0006595,1.39e-09,160;UBERON:0005910,1.09e-08,6;UBERON:0005153,7.96e-08,37;UBERON:0004921,1.20e-07,118;UBERON:0001007,1.63e-07,145;UBERON:0001555,1.63e-07,145;UBERON:0007026,1.63e-07,145;UBERON:0002365,1.76e-07,31;UBERON:0002330,1.76e-07,31;UBERON:0005157,1.80e-07,47;UBERON:0001764,5.90e-07,1;UBERON:0001825,5.90e-07,1;UBERON:0005911,6.30e-07,82 | |||
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|short_description=p13@FERMT1 | |short_description=p13@FERMT1 | ||
}} | }} |
Revision as of 20:34, 17 November 2012
Short description: | p13@FERMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_FERMT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_ENST00000217289, ENST00000339538, NM_017671, uc002wmr.2, uc002wms.2, uc010gbt.2_5end |
EntrezGene: | FERMT1 |
HGNC: | 15889 |
UniProt: | Q9BQL6F8W9F0Q49AC8Q54A15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.73e-13 | 253 |
mammary gland epithelial cell | 3.49e-12 | 4 |
endodermal cell | 3.35e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 3.49e-12 | 4 |
mammary bud | 3.49e-12 | 4 |
mammary ridge | 3.49e-12 | 4 |
mammary placode | 3.49e-12 | 4 |
urothelium | 2.43e-10 | 5 |
endoderm-derived structure | 1.39e-09 | 160 |
endoderm | 1.39e-09 | 160 |
presumptive endoderm | 1.39e-09 | 160 |
transitional epithelium | 1.09e-08 | 6 |
epithelial bud | 7.96e-08 | 37 |
subdivision of digestive tract | 1.20e-07 | 118 |
digestive system | 1.63e-07 | 145 |
digestive tract | 1.63e-07 | 145 |
primitive gut | 1.63e-07 | 145 |
exocrine gland | 1.76e-07 | 31 |
exocrine system | 1.76e-07 | 31 |
epithelial fold | 1.80e-07 | 47 |
maxillary sinus | 5.90e-07 | 1 |
paranasal sinus | 5.90e-07 | 1 |
endo-epithelium | 6.30e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.30e-17 | 14 |
carcinoma | 1.37e-13 | 106 |
cell type cancer | 5.26e-09 | 143 |
paranasal sinus cancer | 5.90e-07 | 1 |
maxillary sinus cancer | 5.90e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.