FFCP PHASE1:Hg19::chr12:31231143..31231159,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0000243!4.99e-07!15;CL:0000125!4.99e-07!15;CL:0000030!4.99e-07!15;CL:0000339!4.99e-07!15 | |ontology_enrichment_celltype=CL:0000243!4.99e-07!15;CL:0000125!4.99e-07!15;CL:0000030!4.99e-07!15;CL:0000339!4.99e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002573;3.56e-27;2!CL:0002178;5.01e-08;3!CL:0000322;6.78e-08;3 | |ontology_enrichment_celltype_v019=CL:0002573;3.56e-27;2!CL:0002178;5.01e-08;3!CL:0000322;6.78e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.38e-27,2;CL:0002178,5.18e-08,3;CL:0000322,5.93e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!5.81e-12!106;DOID:3908!1.47e-09!5;DOID:0050687!1.12e-08!143;DOID:14566!1.78e-07!239;DOID:3910!4.55e-07!2 | |ontology_enrichment_disease=DOID:305!5.81e-12!106;DOID:3908!1.47e-09!5;DOID:0050687!1.12e-08!143;DOID:14566!1.78e-07!239;DOID:3910!4.55e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3910;3.34e-11;2 | |ontology_enrichment_disease_v019=DOID:3910;3.34e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000464!2.66e-08!104;UBERON:0000466!3.54e-08!126;UBERON:0002114!1.37e-07!12;UBERON:0001264!2.19e-07!10;UBERON:0003922!2.19e-07!10;UBERON:0003923!2.19e-07!10;UBERON:0003924!2.19e-07!10;UBERON:0003921!2.19e-07!10;UBERON:0004903!4.55e-07!2;UBERON:0002173!4.55e-07!2;UBERON:0002186!4.55e-07!2;UBERON:0004458!7.52e-07!49 | |ontology_enrichment_uberon=UBERON:0000464!2.66e-08!104;UBERON:0000466!3.54e-08!126;UBERON:0002114!1.37e-07!12;UBERON:0001264!2.19e-07!10;UBERON:0003922!2.19e-07!10;UBERON:0003923!2.19e-07!10;UBERON:0003924!2.19e-07!10;UBERON:0003921!2.19e-07!10;UBERON:0004903!4.55e-07!2;UBERON:0002173!4.55e-07!2;UBERON:0002186!4.55e-07!2;UBERON:0004458!7.52e-07!49 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.34e-11;2!UBERON:0002173;3.34e-11;2!UBERON:0002186;3.34e-11;2!UBERON:0000010;9.65e-10;8!UBERON:0004821;6.78e-08;3!UBERON:0007499;6.78e-08;3!UBERON:0003215;6.78e-08;3!UBERON:0010368;6.78e-08;3!UBERON:0009911;6.78e-08;3!UBERON:0002299;6.78e-08;3!UBERON:0006524;6.78e-08;3!UBERON:0008874;6.78e-08;3!UBERON:0002169;6.78e-08;3!UBERON:0004894;6.78e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0004903;3.34e-11;2!UBERON:0002173;3.34e-11;2!UBERON:0002186;3.34e-11;2!UBERON:0000010;9.65e-10;8!UBERON:0004821;6.78e-08;3!UBERON:0007499;6.78e-08;3!UBERON:0003215;6.78e-08;3!UBERON:0010368;6.78e-08;3!UBERON:0009911;6.78e-08;3!UBERON:0002299;6.78e-08;3!UBERON:0006524;6.78e-08;3!UBERON:0008874;6.78e-08;3!UBERON:0002169;6.78e-08;3!UBERON:0004894;6.78e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.73e-11,2;UBERON:0002173,2.73e-11,2;UBERON:0002186,2.73e-11,2;UBERON:0000010,8.46e-10,8;UBERON:0004821,5.93e-08,3;UBERON:0003215,5.93e-08,3;UBERON:0010368,5.93e-08,3;UBERON:0009911,5.93e-08,3;UBERON:0002299,5.93e-08,3;UBERON:0006524,5.93e-08,3;UBERON:0008874,5.93e-08,3;UBERON:0002169,5.93e-08,3;UBERON:0004894,5.93e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.742585499285292,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.844430541190656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,1.70481688083848,0,0,0,0,0,0.445234820091624,0.988823245360557,0,0,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,2.85614496887536,0,0.664653872707185,0.992975867626496,0.941798755221676,1.19472429772959,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,2.4495370916198,0,0,0,0.248505071130865,0,0.135904206073614,0.313808538937,0.101998217636322,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739202355635845,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.50313580350515,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89331201168905,1.27820107138737,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53665430155261,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0.101988829741982,0,1.01084389488329,0.250707539292375,0,0.535928260312357,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.960546112899439,0,0.808426818959282,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.742585499285292,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.844430541190656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,1.70481688083848,0,0,0,0,0,0.445234820091624,0.988823245360557,0,0,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,2.85614496887536,0,0.664653872707185,0.992975867626496,0.941798755221676,1.19472429772959,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,2.4495370916198,0,0,0,0.248505071130865,0,0.135904206073614,0.313808538937,0.101998217636322,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739202355635845,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.50313580350515,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89331201168905,1.27820107138737,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53665430155261,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0.101988829741982,0,1.01084389488329,0.250707539292375,0,0.535928260312357,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.960546112899439,0,0.808426818959282,0,0,0,0,0,0 | ||
|short_description=p5@DDX11 | |short_description=p5@DDX11 | ||
}} | }} |
Revision as of 01:03, 18 November 2012
Short description: | p5@DDX11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_DDX11_5end |
Coexpression cluster: | NA |
Association with transcript: | -294bp_to_ENST00000544652_5end |
EntrezGene: | DDX11 |
HGNC: | 2736 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.38e-27 | 2 |
epithelial cell of stomach | 5.18e-08 | 3 |
pneumocyte | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.73e-11 | 2 |
alveolar duct | 2.73e-11 | 2 |
bronchiole | 2.73e-11 | 2 |
peripheral nervous system | 8.46e-10 | 8 |
pulmonary alveolus epithelium | 5.93e-08 | 3 |
alveolus | 5.93e-08 | 3 |
pulmonary lobule | 5.93e-08 | 3 |
lobule | 5.93e-08 | 3 |
alveolus of lung | 5.93e-08 | 3 |
alveolar system | 5.93e-08 | 3 |
pulmonary acinus | 5.93e-08 | 3 |
alveolar sac | 5.93e-08 | 3 |
alveolar wall | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.73e-11 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.