FFCP PHASE1:Hg19::chr2:20403746..20403774,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!2.21e-15!254;CL:0002076!6.38e-12!43;CL:0000223!2.85e-11!59;CL:0002368!2.54e-10!13 | |ontology_enrichment_celltype=CL:0000066!2.21e-15!254;CL:0002076!6.38e-12!43;CL:0000223!2.85e-11!59;CL:0002368!2.54e-10!13 | ||
|ontology_enrichment_celltype_v019=CL:0002327;7.42e-21;4!CL:0002076;7.86e-14;42!CL:0002621;3.05e-13;3!CL:0002328;5.46e-13;3!CL:0002623;5.46e-13;3!CL:0002251;3.01e-11;20!CL:0000244;2.13e-10;4!CL:0000731;2.13e-10;4!CL:0002252;2.28e-10;1!CL:0002202;1.37e-09;9!CL:0002632;1.37e-09;9!CL:0000312;2.44e-08;5!CL:0000622;3.78e-08;5!CL:0000240;4.38e-07;6!CL:0000311;4.38e-07;6!CL:0000079;4.38e-07;6!CL:0000237;4.38e-07;6!CL:0000154;6.28e-07;6!CL:0002368;8.70e-07;13 | |ontology_enrichment_celltype_v019=CL:0002327;7.42e-21;4!CL:0002076;7.86e-14;42!CL:0002621;3.05e-13;3!CL:0002328;5.46e-13;3!CL:0002623;5.46e-13;3!CL:0002251;3.01e-11;20!CL:0000244;2.13e-10;4!CL:0000731;2.13e-10;4!CL:0002252;2.28e-10;1!CL:0002202;1.37e-09;9!CL:0002632;1.37e-09;9!CL:0000312;2.44e-08;5!CL:0000622;3.78e-08;5!CL:0000240;4.38e-07;6!CL:0000311;4.38e-07;6!CL:0000079;4.38e-07;6!CL:0000237;4.38e-07;6!CL:0000154;6.28e-07;6!CL:0002368;8.70e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,3.51e-21,4;CL:0002076,4.24e-16,42;CL:0002621,3.57e-13,3;CL:0002328,4.84e-13,3;CL:0002623,1.35e-12,3;CL:0000223,2.56e-11,58;CL:0002251,4.52e-11,20;CL:0000244,2.18e-10,4;CL:0000731,2.18e-10,4;CL:0002252,2.50e-10,1;CL:0002202,1.37e-09,9;CL:0002632,1.37e-09,9;CL:0000066,9.09e-09,253;CL:0000312,2.19e-08,5;CL:0000622,6.47e-08,5;CL:0000240,4.00e-07,6;CL:0000311,4.00e-07,6;CL:0000079,4.00e-07,6;CL:0000237,4.00e-07,6;CL:0000036,4.00e-07,6;CL:0000357,4.00e-07,6;CL:0000114,4.00e-07,6;CL:0002368,8.71e-07,13;CL:0000154,9.81e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.28e-10;1!UBERON:0003124;2.28e-10;1!CL:0000223;7.89e-08;58!CL:0000357;4.38e-07;6!CL:0000114;4.38e-07;6 | |ontology_enrichment_development_v019=UBERON:0009143;2.28e-10;1!UBERON:0003124;2.28e-10;1!CL:0000223;7.89e-08;58!CL:0000357;4.38e-07;6!CL:0000114;4.38e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;2.28e-10;1!DOID:3149;2.28e-10;1 | |ontology_enrichment_disease_v019=DOID:3151;2.28e-10;1!DOID:3149;2.28e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.43e-10,1;DOID:3149,1.43e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.08e-20!169;UBERON:0000925!1.08e-20!169;UBERON:0006595!1.08e-20!169;UBERON:0001007!4.13e-13!155;UBERON:0001555!4.13e-13!155;UBERON:0007026!4.13e-13!155;UBERON:0005911!2.19e-12!82;UBERON:0001004!1.20e-11!72;UBERON:0000077!2.93e-11!130;UBERON:0004921!5.08e-11!129;UBERON:0004185!5.08e-11!129;UBERON:0000161!2.64e-10!35;UBERON:0005153!1.06e-09!37;UBERON:0000065!4.66e-09!53;UBERON:0005910!4.83e-07!6;UBERON:0005157!5.43e-07!51;UBERON:0003929!5.74e-07!54 | |ontology_enrichment_uberon=UBERON:0004119!1.08e-20!169;UBERON:0000925!1.08e-20!169;UBERON:0006595!1.08e-20!169;UBERON:0001007!4.13e-13!155;UBERON:0001555!4.13e-13!155;UBERON:0007026!4.13e-13!155;UBERON:0005911!2.19e-12!82;UBERON:0001004!1.20e-11!72;UBERON:0000077!2.93e-11!130;UBERON:0004921!5.08e-11!129;UBERON:0004185!5.08e-11!129;UBERON:0000161!2.64e-10!35;UBERON:0005153!1.06e-09!37;UBERON:0000065!4.66e-09!53;UBERON:0005910!4.83e-07!6;UBERON:0005157!5.43e-07!51;UBERON:0003929!5.74e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;7.42e-21;4!UBERON:0001949;3.05e-13;3!UBERON:0001043;5.46e-13;3!UBERON:0004815;5.46e-13;3!UBERON:0002031;5.46e-13;3!UBERON:0000486;1.19e-12;12!UBERON:0001041;1.58e-10;14!UBERON:0005911;2.12e-10;36!UBERON:0004807;3.27e-10;22!UBERON:0001987;5.70e-10;4!UBERON:0000365;1.72e-08;5!UBERON:0002185;3.78e-08;5!UBERON:0000161;7.10e-08;19!UBERON:0000166;7.10e-08;19!UBERON:0005910;3.28e-07;6!UBERON:0001044;6.28e-07;6!UBERON:0003293;6.28e-07;6!UBERON:0003294;6.28e-07;6!UBERON:0010047;6.28e-07;6!UBERON:0003408;6.28e-07;6!UBERON:0000167;6.28e-07;6!UBERON:0002365;6.62e-07;31!UBERON:0002330;6.62e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0001911;7.42e-21;4!UBERON:0001949;3.05e-13;3!UBERON:0001043;5.46e-13;3!UBERON:0004815;5.46e-13;3!UBERON:0002031;5.46e-13;3!UBERON:0000486;1.19e-12;12!UBERON:0001041;1.58e-10;14!UBERON:0005911;2.12e-10;36!UBERON:0004807;3.27e-10;22!UBERON:0001987;5.70e-10;4!UBERON:0000365;1.72e-08;5!UBERON:0002185;3.78e-08;5!UBERON:0000161;7.10e-08;19!UBERON:0000166;7.10e-08;19!UBERON:0005910;3.28e-07;6!UBERON:0001044;6.28e-07;6!UBERON:0003293;6.28e-07;6!UBERON:0003294;6.28e-07;6!UBERON:0010047;6.28e-07;6!UBERON:0003408;6.28e-07;6!UBERON:0000167;6.28e-07;6!UBERON:0002365;6.62e-07;31!UBERON:0002330;6.62e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,3.51e-21,4;UBERON:0005333,3.51e-21,4;UBERON:0008425,3.51e-21,4;UBERON:0005311,3.51e-21,4;UBERON:0001949,3.57e-13,3;UBERON:0004815,4.84e-13,3;UBERON:0002031,4.84e-13,3;UBERON:0001043,5.47e-13,3;UBERON:0009143,5.47e-13,3;UBERON:0005157,1.92e-11,47;UBERON:0005153,2.32e-11,37;UBERON:0000076,6.95e-11,8;UBERON:0001987,5.97e-10,4;UBERON:0004340,5.97e-10,4;UBERON:0004119,1.10e-08,160;UBERON:0000925,1.10e-08,160;UBERON:0006595,1.10e-08,160;UBERON:0000365,1.76e-08,5;UBERON:0002185,3.52e-08,5;UBERON:0004807,5.67e-08,28;UBERON:0005910,3.34e-07,6;UBERON:0002365,4.05e-07,31;UBERON:0002330,4.05e-07,31;UBERON:0001044,9.81e-07,6;UBERON:0003293,9.81e-07,6;UBERON:0003294,9.81e-07,6;UBERON:0010047,9.81e-07,6;UBERON:0000167,9.81e-07,6 | |||
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| ||
|short_description=p@chr2:20403746..20403774,+ | |short_description=p@chr2:20403746..20403774,+ | ||
}} | }} |
Revision as of 06:14, 19 November 2012
Short description: | p@chr2:20403746..20403774, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:20403746..20403774, + |
Coexpression cluster: | C572_Urothelial_Prostate_Keratinocyte_Corneal_Mammary_Bronchial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 3.51e-21 | 4 |
endo-epithelial cell | 4.24e-16 | 42 |
gingival epithelial cell | 3.57e-13 | 3 |
bronchial epithelial cell | 4.84e-13 | 3 |
acinar cell of salivary gland | 1.35e-12 | 3 |
endodermal cell | 2.56e-11 | 58 |
epithelial cell of alimentary canal | 4.52e-11 | 20 |
transitional epithelial cell | 2.18e-10 | 4 |
urothelial cell | 2.18e-10 | 4 |
epithelial cell of esophagus | 2.50e-10 | 1 |
epithelial cell of tracheobronchial tree | 1.37e-09 | 9 |
epithelial cell of lower respiratory tract | 1.37e-09 | 9 |
epithelial cell | 9.09e-09 | 253 |
keratinocyte | 2.19e-08 | 5 |
acinar cell | 6.47e-08 | 5 |
stratified squamous epithelial cell | 4.00e-07 | 6 |
keratin accumulating cell | 4.00e-07 | 6 |
stratified epithelial cell | 4.00e-07 | 6 |
keratinizing barrier epithelial cell | 4.00e-07 | 6 |
epithelial fate stem cell | 4.00e-07 | 6 |
stratified epithelial stem cell | 4.00e-07 | 6 |
surface ectodermal cell | 4.00e-07 | 6 |
respiratory epithelial cell | 8.71e-07 | 13 |
protein secreting cell | 9.81e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 3.51e-21 | 4 |
mammary bud | 3.51e-21 | 4 |
mammary ridge | 3.51e-21 | 4 |
mammary placode | 3.51e-21 | 4 |
gingival epithelium | 3.57e-13 | 3 |
lower respiratory tract epithelium | 4.84e-13 | 3 |
epithelium of bronchus | 4.84e-13 | 3 |
esophagus | 5.47e-13 | 3 |
esophageal region | 5.47e-13 | 3 |
epithelial fold | 1.92e-11 | 47 |
epithelial bud | 2.32e-11 | 37 |
external ectoderm | 6.95e-11 | 8 |
placenta | 5.97e-10 | 4 |
allantois | 5.97e-10 | 4 |
endoderm-derived structure | 1.10e-08 | 160 |
endoderm | 1.10e-08 | 160 |
presumptive endoderm | 1.10e-08 | 160 |
urothelium | 1.76e-08 | 5 |
bronchus | 3.52e-08 | 5 |
respiratory system epithelium | 5.67e-08 | 28 |
transitional epithelium | 3.34e-07 | 6 |
exocrine gland | 4.05e-07 | 31 |
exocrine system | 4.05e-07 | 31 |
saliva-secreting gland | 9.81e-07 | 6 |
gland of oral region | 9.81e-07 | 6 |
gland of foregut | 9.81e-07 | 6 |
oral gland | 9.81e-07 | 6 |
oral cavity | 9.81e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.43e-10 | 1 |
keratoacanthoma | 1.43e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.