FFCP PHASE1:Hg19::chr19:6711107..6711132,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000077!5.97e-07!19 | |ontology_enrichment_celltype=CL:0000077!5.97e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.33e-14;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.33e-14;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.78e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.34e-15;11!UBERON:0009497;6.65e-13;13 | |ontology_enrichment_development_v019=UBERON:0004161;2.34e-15;11!UBERON:0009497;6.65e-13;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.96e-21!115;UBERON:0000477!6.26e-09!286;UBERON:0004111!7.37e-09!241;UBERON:0000481!8.38e-09!347;UBERON:0002368!1.59e-07!35;UBERON:0000025!2.00e-07!194;UBERON:0009497!4.78e-07!25;UBERON:0000015!4.78e-07!25;UBERON:0002423!4.78e-07!25;UBERON:0006235!4.78e-07!25;UBERON:0004161!4.78e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!9.96e-21!115;UBERON:0000477!6.26e-09!286;UBERON:0004111!7.37e-09!241;UBERON:0000481!8.38e-09!347;UBERON:0002368!1.59e-07!35;UBERON:0000025!2.00e-07!194;UBERON:0009497!4.78e-07!25;UBERON:0000015!4.78e-07!25;UBERON:0002423!4.78e-07!25;UBERON:0006235!4.78e-07!25;UBERON:0004161!4.78e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.15e-15;19!UBERON:0006925;1.15e-15;19!UBERON:0002423;1.49e-14;25!UBERON:0002365;1.36e-08;31!UBERON:0002330;1.36e-08;31!UBERON:0002368;5.96e-08;33!UBERON:0004151;1.75e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.15e-15;19!UBERON:0006925;1.15e-15;19!UBERON:0002423;1.49e-14;25!UBERON:0002365;1.36e-08;31!UBERON:0002330;1.36e-08;31!UBERON:0002368;5.96e-08;33!UBERON:0004151;1.75e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.23e-16,19;UBERON:0006925,9.23e-16,19;UBERON:0008836,9.23e-16,19;UBERON:0009497,1.19e-14,25;UBERON:0000015,1.19e-14,25;UBERON:0002423,1.19e-14,25;UBERON:0006235,1.19e-14,25;UBERON:0004161,1.19e-14,25;UBERON:0008835,1.96e-13,22;UBERON:0003894,1.96e-13,22;UBERON:0009854,8.59e-13,23;UBERON:0007499,1.15e-11,25;UBERON:0009856,3.64e-11,26;UBERON:0002365,3.73e-09,31;UBERON:0002330,3.73e-09,31;UBERON:0005172,7.03e-09,54;UBERON:0005173,7.03e-09,54;UBERON:0003914,3.25e-08,117;UBERON:0002368,5.82e-08,35;UBERON:0002417,8.83e-08,60;UBERON:0000916,8.83e-08,60;UBERON:0005256,9.14e-08,122;UBERON:0004151,1.75e-07,3;UBERON:0003929,2.65e-07,54 | |||
|phase1_expression=0,1.07050261945492,0,0,0,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0,0,2.01697543935533,0,0,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0,4.69348596989448,0,0,0,0,0,0,0.241011029883482,0.330881918197182,0,0,0,0,0,0,0,0,0,62.1099670626971,42.2615703171379,14.1789577603537,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.904318131178758,0,2.19940580600526,1.2162378064119,0,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0.802025881213139,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0.290033387828457,0,0,0.165284915360978,0,0.255225424989168,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0.974853958525138,0,0,0.141405431953713,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.422215270595328,1.64647446479951,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0.796991953004279,0,0,0,0,0,0.0898683511473268,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.844175070377856,0,0,0,0,0,0,0.230850775511391,1.70913083770502,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,1.63232808159148,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0.802577647298789,0.468528891450678,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0.171986032471617,0.19351266257817,0.219267951258557,0.0821154570532092,0.678923115418936,0,0,0,0.19871461170299,0,0,0.240476460754601,1.49417096317547,0,0,0,0,0.288109595976299,0,0,0,0,0,0.288950589901519,0.600420288709789,1.09524303113594,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0,0.360299883542404,0,0.787831823072237,1.7307330260045,1.07845670166696,0,0,1.59045937961861,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.157363764404994,0,0,0,3.57347663186684,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0,9.52589518907536,6.62534444561107,0.258565912723101,0.52893040697076,0,0,0.533937062838473,1.25763444079733,0.828478110694391,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0.625954653532499,0,0.221858103073705,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.686520205190771,0.302461847526478,0,0.147855149989634,0.318593534327405,0.899606224327209,0.155262956876259,0,0,1.5652351854352,1.05180326298053,3.04644169735036,0,0,0.429642228169954,0,0.398095888698616,0,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0.226705925512272,0,0.489473409012935,0,0.308801447160972,0.657852148736121,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.12815492523886,0,0.781514011233092,0,0.818859587550484,0,0,0,0.206686796501184,0.0634158101939068,0,0,1.48863353516788,0,2.42748612515231,0,0.336283722218824,0,0,0,0,0.514464028312255,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,0.215927591218621,1.9110067515482,0.142953088353313,0,0,0,0,0.62164849248911,0.51215543128185,0,0,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0.588925401344836,0.891139200981258,0,0,0,0,0,0.178553938605658,0,0,0,0,0.573358332605805,0,0,0,1.5870805215462,0.743990036333503,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0.310298987585686,0.213233981900981,0,0.0645889098360061,0,0,0.381882949668989,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.573777643141411,0.332660356546013,0.244209805832924,0.213454691755431,0,0,2.34640942403454,0,0,0.665756774185513,0.603821380773079,0 | |phase1_expression=0,1.07050261945492,0,0,0,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0,0,2.01697543935533,0,0,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0,4.69348596989448,0,0,0,0,0,0,0.241011029883482,0.330881918197182,0,0,0,0,0,0,0,0,0,62.1099670626971,42.2615703171379,14.1789577603537,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.904318131178758,0,2.19940580600526,1.2162378064119,0,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0.802025881213139,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0.290033387828457,0,0,0.165284915360978,0,0.255225424989168,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0.974853958525138,0,0,0.141405431953713,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.422215270595328,1.64647446479951,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0.796991953004279,0,0,0,0,0,0.0898683511473268,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.844175070377856,0,0,0,0,0,0,0.230850775511391,1.70913083770502,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.632994193584081,1.63232808159148,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0.802577647298789,0.468528891450678,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0.171986032471617,0.19351266257817,0.219267951258557,0.0821154570532092,0.678923115418936,0,0,0,0.19871461170299,0,0,0.240476460754601,1.49417096317547,0,0,0,0,0.288109595976299,0,0,0,0,0,0.288950589901519,0.600420288709789,1.09524303113594,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0,0.360299883542404,0,0.787831823072237,1.7307330260045,1.07845670166696,0,0,1.59045937961861,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.157363764404994,0,0,0,3.57347663186684,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0,9.52589518907536,6.62534444561107,0.258565912723101,0.52893040697076,0,0,0.533937062838473,1.25763444079733,0.828478110694391,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0.625954653532499,0,0.221858103073705,0.0620964029413835,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.686520205190771,0.302461847526478,0,0.147855149989634,0.318593534327405,0.899606224327209,0.155262956876259,0,0,1.5652351854352,1.05180326298053,3.04644169735036,0,0,0.429642228169954,0,0.398095888698616,0,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0.226705925512272,0,0.489473409012935,0,0.308801447160972,0.657852148736121,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.12815492523886,0,0.781514011233092,0,0.818859587550484,0,0,0,0.206686796501184,0.0634158101939068,0,0,1.48863353516788,0,2.42748612515231,0,0.336283722218824,0,0,0,0,0.514464028312255,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,0.215927591218621,1.9110067515482,0.142953088353313,0,0,0,0,0.62164849248911,0.51215543128185,0,0,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0.588925401344836,0.891139200981258,0,0,0,0,0,0.178553938605658,0,0,0,0,0.573358332605805,0,0,0,1.5870805215462,0.743990036333503,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0.310298987585686,0.213233981900981,0,0.0645889098360061,0,0,0.381882949668989,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.573777643141411,0.332660356546013,0.244209805832924,0.213454691755431,0,0,2.34640942403454,0,0,0.665756774185513,0.603821380773079,0 | ||
|short_description=p13@C3 | |short_description=p13@C3 | ||
}} | }} |
Revision as of 10:51, 19 November 2012
Short description: | p13@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -139bp_to_ENST00000466344_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.78e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 9.23e-16 | 19 |
digestive gland | 9.23e-16 | 19 |
liver bud | 9.23e-16 | 19 |
epithelium of foregut-midgut junction | 1.19e-14 | 25 |
anatomical boundary | 1.19e-14 | 25 |
hepatobiliary system | 1.19e-14 | 25 |
foregut-midgut junction | 1.19e-14 | 25 |
septum transversum | 1.19e-14 | 25 |
hepatic diverticulum | 1.96e-13 | 22 |
liver primordium | 1.96e-13 | 22 |
digestive tract diverticulum | 8.59e-13 | 23 |
epithelial sac | 1.15e-11 | 25 |
sac | 3.64e-11 | 26 |
exocrine gland | 3.73e-09 | 31 |
exocrine system | 3.73e-09 | 31 |
abdomen element | 7.03e-09 | 54 |
abdominal segment element | 7.03e-09 | 54 |
epithelial tube | 3.25e-08 | 117 |
endocrine gland | 5.82e-08 | 35 |
abdominal segment of trunk | 8.83e-08 | 60 |
abdomen | 8.83e-08 | 60 |
trunk mesenchyme | 9.14e-08 | 122 |
cardiac chamber | 1.75e-07 | 3 |
gut epithelium | 2.65e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.