FFCP PHASE1:Hg19::chr8:57354463..57354473,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000135!4.41e-19!3;CL:0000386!4.41e-19!3;CL:0000388!4.41e-19!3;CL:0000153!2.77e-11!9;CL:0000447!2.77e-11!9;CL:0000499!2.30e-10!27;CL:0000667!5.31e-10!6;CL:0000058!5.31e-10!6;CL:0000138!5.31e-10!6;CL:0002556!9.08e-10!6;CL:0000057!1.48e-07!75;CL:0000327!2.82e-07!14 | |ontology_enrichment_celltype=CL:0000135!4.41e-19!3;CL:0000386!4.41e-19!3;CL:0000388!4.41e-19!3;CL:0000153!2.77e-11!9;CL:0000447!2.77e-11!9;CL:0000499!2.30e-10!27;CL:0000667!5.31e-10!6;CL:0000058!5.31e-10!6;CL:0000138!5.31e-10!6;CL:0002556!9.08e-10!6;CL:0000057!1.48e-07!75;CL:0000327!2.82e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000138;1.04e-37;6!CL:0000135;9.10e-34;3!CL:0000388;9.10e-34;3!CL:0000153;1.92e-25;9!CL:0000447;1.92e-25;9!CL:0000499;2.47e-22;28!CL:0000327;1.37e-15;15 | |ontology_enrichment_celltype_v019=CL:0000138;1.04e-37;6!CL:0000135;9.10e-34;3!CL:0000388;9.10e-34;3!CL:0000153;1.92e-25;9!CL:0000447;1.92e-25;9!CL:0000499;2.47e-22;28!CL:0000327;1.37e-15;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.18e-37,6;CL:0000138,1.18e-37,6;CL:0000135,9.10e-34,3;CL:0000388,9.10e-34,3;CL:0000153,2.09e-25,9;CL:0000447,2.09e-25,9;CL:0000499,2.58e-22,28;CL:0000327,1.44e-15,15;CL:0000151,7.22e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.16e-26;1!UBERON:0003852;2.16e-26;1!UBERON:0005062;1.31e-07;4!UBERON:0007284;1.31e-07;4 | |ontology_enrichment_development_v019=UBERON:0003099;2.16e-26;1!UBERON:0003852;2.16e-26;1!UBERON:0005062;1.31e-07;4!UBERON:0007284;1.31e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3193;1.29e-13;2!DOID:962;1.29e-13;2!DOID:1192;1.60e-09;3 | |ontology_enrichment_disease_v019=DOID:3193;1.29e-13;2!DOID:962;1.29e-13;2!DOID:1192;1.60e-09;3 | ||
|ontology_enrichment_disease_v019_2=DOID:3193,1.37e-13,2;DOID:962,1.37e-13,2;DOID:1192,1.67e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0000043!4.41e-19!3;UBERON:0001758!9.08e-10!6;UBERON:0003672!9.08e-10!6;UBERON:0003129!3.50e-09!11;UBERON:0000075!8.87e-08!13;UBERON:0005944!8.87e-08!13;UBERON:0004288!8.87e-08!13;UBERON:0003089!8.87e-08!13;UBERON:0005705!9.91e-08!1;UBERON:0008193!9.91e-08!1;UBERON:0002514!9.91e-08!1;UBERON:0003462!9.91e-08!1;UBERON:0008001!9.91e-08!1;UBERON:0007914!9.91e-08!1;UBERON:0003457!9.91e-08!1;UBERON:0009292!9.91e-08!1;UBERON:0007375!9.91e-08!1;UBERON:0003323!9.91e-08!1;UBERON:0002397!9.91e-08!1;UBERON:0001709!9.91e-08!1;UBERON:0004066!9.91e-08!1;UBERON:0002244!9.91e-08!1;UBERON:0005620!9.91e-08!1;UBERON:0004068!9.91e-08!1;UBERON:0004362!9.91e-08!1;UBERON:0002363!3.62e-07!1;UBERON:0007647!3.62e-07!1;UBERON:0010115!3.62e-07!1;UBERON:0001882!5.50e-07!1;UBERON:0005403!5.50e-07!1;UBERON:0002902!6.57e-07!1;UBERON:0009899!6.57e-07!1;UBERON:0007190!6.97e-07!1;UBERON:0000369!9.11e-07!4;UBERON:0002435!9.11e-07!4;UBERON:0000204!9.11e-07!4;UBERON:0010082!9.11e-07!4 | |ontology_enrichment_uberon=UBERON:0000043!4.41e-19!3;UBERON:0001758!9.08e-10!6;UBERON:0003672!9.08e-10!6;UBERON:0003129!3.50e-09!11;UBERON:0000075!8.87e-08!13;UBERON:0005944!8.87e-08!13;UBERON:0004288!8.87e-08!13;UBERON:0003089!8.87e-08!13;UBERON:0005705!9.91e-08!1;UBERON:0008193!9.91e-08!1;UBERON:0002514!9.91e-08!1;UBERON:0003462!9.91e-08!1;UBERON:0008001!9.91e-08!1;UBERON:0007914!9.91e-08!1;UBERON:0003457!9.91e-08!1;UBERON:0009292!9.91e-08!1;UBERON:0007375!9.91e-08!1;UBERON:0003323!9.91e-08!1;UBERON:0002397!9.91e-08!1;UBERON:0001709!9.91e-08!1;UBERON:0004066!9.91e-08!1;UBERON:0002244!9.91e-08!1;UBERON:0005620!9.91e-08!1;UBERON:0004068!9.91e-08!1;UBERON:0004362!9.91e-08!1;UBERON:0002363!3.62e-07!1;UBERON:0007647!3.62e-07!1;UBERON:0010115!3.62e-07!1;UBERON:0001882!5.50e-07!1;UBERON:0005403!5.50e-07!1;UBERON:0002902!6.57e-07!1;UBERON:0009899!6.57e-07!1;UBERON:0007190!6.97e-07!1;UBERON:0000369!9.11e-07!4;UBERON:0002435!9.11e-07!4;UBERON:0000204!9.11e-07!4;UBERON:0010082!9.11e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;9.10e-34;3!UBERON:0000043;9.10e-34;3!UBERON:0007845;9.10e-34;3!UBERON:0005705;2.16e-26;1!UBERON:0008193;2.16e-26;1!UBERON:0010912;2.16e-26;1!UBERON:0002514;2.16e-26;1!UBERON:0003457;2.16e-26;1!UBERON:0008907;2.16e-26;1!UBERON:0008001;2.16e-26;1!UBERON:0007213;2.16e-26;1!UBERON:0009891;2.16e-26;1!UBERON:0007914;2.16e-26;1!UBERON:0007375;2.16e-26;1!UBERON:0003323;2.16e-26;1!UBERON:0010258;2.16e-26;1!UBERON:0005253;2.16e-26;1!UBERON:0007842;2.16e-26;1!UBERON:0002397;2.16e-26;1!UBERON:0003113;2.16e-26;1!UBERON:0003277;2.16e-26;1!UBERON:0001709;2.16e-26;1!UBERON:0002244;2.16e-26;1!UBERON:0005620;2.16e-26;1!UBERON:0010364;2.16e-26;1!UBERON:0004288;2.16e-26;1!UBERON:0004089;6.43e-14;2!UBERON:0003714;1.29e-13;2!UBERON:0011137;4.94e-10;11!UBERON:0010323;4.94e-10;11!UBERON:0001708;1.31e-07;4!UBERON:0008895;1.31e-07;4!UBERON:0000075;3.50e-07;16 | |ontology_enrichment_uberon_v019=UBERON:0007846;9.10e-34;3!UBERON:0000043;9.10e-34;3!UBERON:0007845;9.10e-34;3!UBERON:0005705;2.16e-26;1!UBERON:0008193;2.16e-26;1!UBERON:0010912;2.16e-26;1!UBERON:0002514;2.16e-26;1!UBERON:0003457;2.16e-26;1!UBERON:0008907;2.16e-26;1!UBERON:0008001;2.16e-26;1!UBERON:0007213;2.16e-26;1!UBERON:0009891;2.16e-26;1!UBERON:0007914;2.16e-26;1!UBERON:0007375;2.16e-26;1!UBERON:0003323;2.16e-26;1!UBERON:0010258;2.16e-26;1!UBERON:0005253;2.16e-26;1!UBERON:0007842;2.16e-26;1!UBERON:0002397;2.16e-26;1!UBERON:0003113;2.16e-26;1!UBERON:0003277;2.16e-26;1!UBERON:0001709;2.16e-26;1!UBERON:0002244;2.16e-26;1!UBERON:0005620;2.16e-26;1!UBERON:0010364;2.16e-26;1!UBERON:0004288;2.16e-26;1!UBERON:0004089;6.43e-14;2!UBERON:0003714;1.29e-13;2!UBERON:0011137;4.94e-10;11!UBERON:0010323;4.94e-10;11!UBERON:0001708;1.31e-07;4!UBERON:0008895;1.31e-07;4!UBERON:0000075;3.50e-07;16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,9.10e-34,3;UBERON:0000043,9.10e-34,3;UBERON:0007845,9.10e-34,3;UBERON:0005705,2.16e-26,1;UBERON:0008193,2.16e-26,1;UBERON:0010912,2.16e-26,1;UBERON:0002514,2.16e-26,1;UBERON:0003457,2.16e-26,1;UBERON:0008907,2.16e-26,1;UBERON:0008001,2.16e-26,1;UBERON:0007213,2.16e-26,1;UBERON:0009891,2.16e-26,1;UBERON:0007914,2.16e-26,1;UBERON:0009292,2.16e-26,1;UBERON:0003099,2.16e-26,1;UBERON:0007375,2.16e-26,1;UBERON:0003323,2.16e-26,1;UBERON:0010258,2.16e-26,1;UBERON:0007842,2.16e-26,1;UBERON:0009494,2.16e-26,1;UBERON:0010042,2.16e-26,1;UBERON:0010045,2.16e-26,1;UBERON:0010259,2.16e-26,1;UBERON:0010359,2.16e-26,1;UBERON:0009526,2.16e-26,1;UBERON:0002397,2.16e-26,1;UBERON:0003113,2.16e-26,1;UBERON:0003277,2.16e-26,1;UBERON:0001709,2.16e-26,1;UBERON:0004066,2.16e-26,1;UBERON:0002244,2.16e-26,1;UBERON:0005620,2.16e-26,1;UBERON:0004362,2.16e-26,1;UBERON:0010364,2.16e-26,1;UBERON:0010046,2.16e-26,1;UBERON:0005868,2.16e-26,1;UBERON:0007238,2.16e-26,1;UBERON:0004288,2.16e-26,1;UBERON:0004068,2.16e-26,1;UBERON:0010334,2.16e-26,1;UBERON:0003852,2.16e-26,1;UBERON:0010253,2.16e-26,1;UBERON:0005253,6.43e-14,2;UBERON:0004089,6.43e-14,2;UBERON:0003714,1.37e-13,2;UBERON:0010323,4.62e-10,11;UBERON:0011137,4.19e-08,14;UBERON:0001708,1.31e-07,4;UBERON:0008895,1.31e-07,4;UBERON:0000075,3.34e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,3.76600949298142,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0.877955241761676,1.83892677479412,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,1.11728983594649,0,0,0,19.0445009592969,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90356865631168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,2.31087814315709,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,3.76600949298142,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0.877955241761676,1.83892677479412,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,1.11728983594649,0,0,0,19.0445009592969,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90356865631168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,2.31087814315709,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:57354463..57354473,+ | |short_description=p@chr8:57354463..57354473,+ | ||
}} | }} |
Revision as of 12:48, 19 November 2012
Short description: | p@chr8:57354463..57354473, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:57354463..57354473, + |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.18e-37 | 6 |
chondrocyte | 1.18e-37 | 6 |
fibrocyte | 9.10e-34 | 3 |
tendon cell | 9.10e-34 | 3 |
GAG secreting cell | 2.09e-25 | 9 |
carbohydrate secreting cell | 2.09e-25 | 9 |
stromal cell | 2.58e-22 | 28 |
extracellular matrix secreting cell | 1.44e-15 | 15 |
secretory cell | 7.22e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 1.37e-13 | 2 |
neurofibroma | 1.37e-13 | 2 |
peripheral nervous system neoplasm | 1.67e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.