FFCP PHASE1:Hg19::chr1:116048147..116048169,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!1.30e-19!43;CL:0002620!6.29e-18!23;CL:0002368!6.67e-14!13;CL:0000622!9.44e-13!5;CL:0000223!1.03e-12!59;CL:0000244!2.33e-11!4;CL:0000731!2.33e-11!4;CL:0002159!2.83e-11!13;CL:0000154!1.52e-10!6;CL:0002202!9.94e-10!9;CL:0002632!9.94e-10!9;CL:0002166!7.72e-09!3;CL:0000068!2.25e-08!3;CL:0000069!2.25e-08!3;CL:0000307!2.25e-08!3;CL:0000377!2.25e-08!3;CL:0002328!2.42e-08!3;CL:0002621!3.33e-08!3;CL:0002077!3.56e-08!33;CL:0002623!4.78e-08!3;CL:0000066!5.68e-07!254;CL:0000150!7.25e-07!9 | |ontology_enrichment_celltype=CL:0002076!1.30e-19!43;CL:0002620!6.29e-18!23;CL:0002368!6.67e-14!13;CL:0000622!9.44e-13!5;CL:0000223!1.03e-12!59;CL:0000244!2.33e-11!4;CL:0000731!2.33e-11!4;CL:0002159!2.83e-11!13;CL:0000154!1.52e-10!6;CL:0002202!9.94e-10!9;CL:0002632!9.94e-10!9;CL:0002166!7.72e-09!3;CL:0000068!2.25e-08!3;CL:0000069!2.25e-08!3;CL:0000307!2.25e-08!3;CL:0000377!2.25e-08!3;CL:0002328!2.42e-08!3;CL:0002621!3.33e-08!3;CL:0002077!3.56e-08!33;CL:0002623!4.78e-08!3;CL:0000066!5.68e-07!254;CL:0000150!7.25e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000244;6.90e-28;4!CL:0000731;6.90e-28;4!CL:0002166;5.42e-21;3!CL:0000317;1.68e-14;2!CL:1000448;1.68e-14;2!CL:0002308;1.68e-14;2!CL:0002140;1.68e-14;2!CL:0002076;3.42e-14;42!CL:0000622;9.01e-13;5!CL:0002368;9.24e-13;13!CL:0002202;4.12e-12;9!CL:0002632;4.12e-12;9!CL:0002159;6.02e-12;14!CL:0000154;9.96e-11;6!CL:0000307;3.49e-10;3!CL:0002620;5.28e-10;23!CL:0002621;5.73e-10;3!CL:0002328;1.33e-09;3!CL:0002252;3.83e-08;1!CL:0002077;7.29e-08;34!CL:0000150;2.64e-07;9 | |ontology_enrichment_celltype_v019=CL:0000244;6.90e-28;4!CL:0000731;6.90e-28;4!CL:0002166;5.42e-21;3!CL:0000317;1.68e-14;2!CL:1000448;1.68e-14;2!CL:0002308;1.68e-14;2!CL:0002140;1.68e-14;2!CL:0002076;3.42e-14;42!CL:0000622;9.01e-13;5!CL:0002368;9.24e-13;13!CL:0002202;4.12e-12;9!CL:0002632;4.12e-12;9!CL:0002159;6.02e-12;14!CL:0000154;9.96e-11;6!CL:0000307;3.49e-10;3!CL:0002620;5.28e-10;23!CL:0002621;5.73e-10;3!CL:0002328;1.33e-09;3!CL:0002252;3.83e-08;1!CL:0002077;7.29e-08;34!CL:0000150;2.64e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,5.63e-28,4;CL:0000731,5.63e-28,4;CL:0002166,3.61e-21,3;CL:0002076,2.76e-17,42;CL:0000317,1.57e-14,2;CL:1000448,1.57e-14,2;CL:0002308,1.57e-14,2;CL:0002140,1.57e-14,2;CL:0002368,9.02e-13,13;CL:0000622,9.39e-13,5;CL:0002202,3.67e-12,9;CL:0002632,3.67e-12,9;CL:0002159,5.12e-12,14;CL:0000223,5.64e-12,58;CL:0000154,1.03e-10,6;CL:0000068,3.65e-10,3;CL:0000069,3.65e-10,3;CL:0000307,3.65e-10,3;CL:0000377,3.65e-10,3;CL:0002620,5.20e-10,23;CL:0002621,5.49e-10,3;CL:0002328,1.07e-09,3;CL:0000066,1.26e-09,253;CL:0002077,8.31e-09,34;CL:0002252,3.58e-08,1;CL:0000150,2.70e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;3.49e-10;3 | |ontology_enrichment_development_v019=CL:0000377;3.49e-10;3 | ||
|ontology_enrichment_disease=DOID:17!3.27e-12!5;DOID:450!3.27e-12!5;DOID:66!3.27e-12!5;DOID:423!3.27e-12!5;DOID:0080000!3.27e-12!5;DOID:11722!3.27e-12!5 | |ontology_enrichment_disease=DOID:17!3.27e-12!5;DOID:450!3.27e-12!5;DOID:66!3.27e-12!5;DOID:423!3.27e-12!5;DOID:0080000!3.27e-12!5;DOID:11722!3.27e-12!5 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!2.47e-17!40;UBERON:0002199!8.03e-15!45;UBERON:0002416!8.03e-15!45;UBERON:0003102!9.37e-15!95;UBERON:0000365!6.10e-13!5;UBERON:0005910!1.06e-10!6;UBERON:0004815!2.42e-08!3;UBERON:0002031!2.42e-08!3;UBERON:0001949!3.33e-08!3;UBERON:0007196!1.04e-07!14;UBERON:0001558!1.04e-07!14 | |ontology_enrichment_uberon=UBERON:0002097!2.47e-17!40;UBERON:0002199!8.03e-15!45;UBERON:0002416!8.03e-15!45;UBERON:0003102!9.37e-15!95;UBERON:0000365!6.10e-13!5;UBERON:0005910!1.06e-10!6;UBERON:0004815!2.42e-08!3;UBERON:0002031!2.42e-08!3;UBERON:0001949!3.33e-08!3;UBERON:0007196!1.04e-07!14;UBERON:0001558!1.04e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.31e-22;5!UBERON:0000486;4.43e-20;12!UBERON:0005910;1.13e-18;6!UBERON:0001708;6.81e-16;4!UBERON:0008895;6.81e-16;4!UBERON:0002419;1.68e-14;2!UBERON:0007771;1.68e-14;2!UBERON:0003297;1.68e-14;2!UBERON:0001821;1.68e-14;2!UBERON:0003487;1.68e-14;2!UBERON:0001820;1.68e-14;2!UBERON:0011159;7.99e-13;5!UBERON:0001949;5.73e-10;3!UBERON:0004815;1.33e-09;3!UBERON:0002031;1.33e-09;3!UBERON:0005911;7.67e-09;36!UBERON:0002097;3.97e-08;41!UBERON:0007195;8.12e-08;1!UBERON:0007196;2.58e-07;15!UBERON:0001558;2.58e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000365;2.31e-22;5!UBERON:0000486;4.43e-20;12!UBERON:0005910;1.13e-18;6!UBERON:0001708;6.81e-16;4!UBERON:0008895;6.81e-16;4!UBERON:0002419;1.68e-14;2!UBERON:0007771;1.68e-14;2!UBERON:0003297;1.68e-14;2!UBERON:0001821;1.68e-14;2!UBERON:0003487;1.68e-14;2!UBERON:0001820;1.68e-14;2!UBERON:0011159;7.99e-13;5!UBERON:0001949;5.73e-10;3!UBERON:0004815;1.33e-09;3!UBERON:0002031;1.33e-09;3!UBERON:0005911;7.67e-09;36!UBERON:0002097;3.97e-08;41!UBERON:0007195;8.12e-08;1!UBERON:0007196;2.58e-07;15!UBERON:0001558;2.58e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.97e-22,5;UBERON:0005910,9.88e-19,6;UBERON:0001708,5.03e-16,4;UBERON:0008895,5.03e-16,4;UBERON:0002419,1.57e-14,2;UBERON:0007771,1.57e-14,2;UBERON:0003297,1.57e-14,2;UBERON:0001821,1.57e-14,2;UBERON:0003487,1.57e-14,2;UBERON:0001820,1.57e-14,2;UBERON:0005089,1.57e-14,2;UBERON:0005088,1.57e-14,2;UBERON:0011159,6.28e-13,5;UBERON:0003102,2.91e-12,99;UBERON:0010188,7.39e-11,6;UBERON:0002539,7.39e-11,6;UBERON:0008816,7.39e-11,6;UBERON:0001949,5.49e-10,3;UBERON:0004815,1.07e-09,3;UBERON:0002031,1.07e-09,3;UBERON:0002097,2.35e-09,41;UBERON:0002199,3.24e-08,46;UBERON:0002416,3.24e-08,46;UBERON:0007195,1.06e-07,1;UBERON:0007196,2.41e-07,15;UBERON:0001558,2.41e-07,15 | |||
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| ||
|short_description=p@chr1:116048147..116048169,+ | |short_description=p@chr1:116048147..116048169,+ | ||
}} | }} |
Revision as of 00:57, 20 November 2012
Short description: | p@chr1:116048147..116048169, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:116048147..116048169, + |
Coexpression cluster: | C1109_Urothelial_Small_Gingival_Mallassezderived_Prostate_Sebocyte_Bronchial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 5.63e-28 | 4 |
urothelial cell | 5.63e-28 | 4 |
epithelial cell of Malassez | 3.61e-21 | 3 |
endo-epithelial cell | 2.76e-17 | 42 |
sebum secreting cell | 1.57e-14 | 2 |
epithelial cell of sweat gland | 1.57e-14 | 2 |
epithelial cell of skin gland | 1.57e-14 | 2 |
acinar cell of sebaceous gland | 1.57e-14 | 2 |
respiratory epithelial cell | 9.02e-13 | 13 |
acinar cell | 9.39e-13 | 5 |
epithelial cell of tracheobronchial tree | 3.67e-12 | 9 |
epithelial cell of lower respiratory tract | 3.67e-12 | 9 |
general ecto-epithelial cell | 5.12e-12 | 14 |
endodermal cell | 5.64e-12 | 58 |
protein secreting cell | 1.03e-10 | 6 |
duct epithelial cell | 3.65e-10 | 3 |
branched duct epithelial cell | 3.65e-10 | 3 |
tracheal epithelial cell | 3.65e-10 | 3 |
tracheoblast | 3.65e-10 | 3 |
skin fibroblast | 5.20e-10 | 23 |
gingival epithelial cell | 5.49e-10 | 3 |
bronchial epithelial cell | 1.07e-09 | 3 |
epithelial cell | 1.26e-09 | 253 |
ecto-epithelial cell | 8.31e-09 | 34 |
epithelial cell of esophagus | 3.58e-08 | 1 |
glandular epithelial cell | 2.70e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.97e-22 | 5 |
transitional epithelium | 9.88e-19 | 6 |
jaw skeleton | 5.03e-16 | 4 |
splanchnocranium | 5.03e-16 | 4 |
skin gland | 1.57e-14 | 2 |
epidermis gland | 1.57e-14 | 2 |
gland of integumental system | 1.57e-14 | 2 |
sebaceous gland | 1.57e-14 | 2 |
skin sebaceous gland | 1.57e-14 | 2 |
sweat gland | 1.57e-14 | 2 |
sweat gland placode | 1.57e-14 | 2 |
sebaceous gland placode | 1.57e-14 | 2 |
primary subdivision of cranial skeletal system | 6.28e-13 | 5 |
surface structure | 2.91e-12 | 99 |
protuberance | 7.39e-11 | 6 |
pharyngeal arch | 7.39e-11 | 6 |
embryonic head | 7.39e-11 | 6 |
gingival epithelium | 5.49e-10 | 3 |
lower respiratory tract epithelium | 1.07e-09 | 3 |
epithelium of bronchus | 1.07e-09 | 3 |
skin of body | 2.35e-09 | 41 |
integument | 3.24e-08 | 46 |
integumental system | 3.24e-08 | 46 |
stroma of bone marrow | 1.06e-07 | 1 |
tracheobronchial tree | 2.41e-07 | 15 |
lower respiratory tract | 2.41e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.