Personal tools

Coexpression cluster:C2457: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_uberon=UBERON:0007023!9.22e-33!114;UBERON:0011216!1.32e-15!223;UBERON:0000481!1.65e-15!342;UBERON:0004121!6.58e-14!171;UBERON:0000924!6.58e-14!171;UBERON:0006601!6.58e-14!171;UBERON:0010314!3.85e-13!132;UBERON:0001049!2.58e-12!56;UBERON:0005068!2.58e-12!56;UBERON:0006241!2.58e-12!56;UBERON:0007135!2.58e-12!56;UBERON:0000062!2.90e-12!503;UBERON:0000064!3.19e-12!218;UBERON:0001017!3.94e-12!81;UBERON:0003075!8.53e-12!82;UBERON:0007284!8.53e-12!82;UBERON:0000073!1.72e-11!53;UBERON:0002616!1.72e-11!53;UBERON:0001016!4.79e-11!89;UBERON:0000468!4.88e-11!656;UBERON:0002346!1.03e-10!86;UBERON:0010371!1.27e-10!104;UBERON:0000955!1.62e-10!68;UBERON:0006238!1.62e-10!68;UBERON:0000467!1.93e-09!624;UBERON:0000480!2.66e-09!625;UBERON:0000477!5.65e-09!373;UBERON:0001893!7.99e-09!34;UBERON:0003528!1.34e-08!34;UBERON:0002020!1.34e-08!34;UBERON:0002780!1.41e-08!41;UBERON:0001890!1.41e-08!41;UBERON:0003080!1.41e-08!41;UBERON:0006240!1.41e-08!41;UBERON:0002791!2.76e-08!32;UBERON:0001869!4.31e-08!32;UBERON:0002050!6.46e-08!564;UBERON:0000922!1.47e-07!592;UBERON:0000923!1.77e-07!560;UBERON:0010316!1.77e-07!560;UBERON:0005291!1.77e-07!560;UBERON:0006598!1.77e-07!560;UBERON:0010317!1.77e-07!560;UBERON:0002532!1.77e-07!560;UBERON:0005423!2.10e-07!581;UBERON:0000956!2.38e-07!25;UBERON:0000203!2.38e-07!25;UBERON:0003056!3.21e-07!61
|ontology_enrichment_uberon=UBERON:0007023!9.22e-33!114;UBERON:0011216!1.32e-15!223;UBERON:0000481!1.65e-15!342;UBERON:0004121!6.58e-14!171;UBERON:0000924!6.58e-14!171;UBERON:0006601!6.58e-14!171;UBERON:0010314!3.85e-13!132;UBERON:0001049!2.58e-12!56;UBERON:0005068!2.58e-12!56;UBERON:0006241!2.58e-12!56;UBERON:0007135!2.58e-12!56;UBERON:0000062!2.90e-12!503;UBERON:0000064!3.19e-12!218;UBERON:0001017!3.94e-12!81;UBERON:0003075!8.53e-12!82;UBERON:0007284!8.53e-12!82;UBERON:0000073!1.72e-11!53;UBERON:0002616!1.72e-11!53;UBERON:0001016!4.79e-11!89;UBERON:0000468!4.88e-11!656;UBERON:0002346!1.03e-10!86;UBERON:0010371!1.27e-10!104;UBERON:0000955!1.62e-10!68;UBERON:0006238!1.62e-10!68;UBERON:0000467!1.93e-09!624;UBERON:0000480!2.66e-09!625;UBERON:0000477!5.65e-09!373;UBERON:0001893!7.99e-09!34;UBERON:0003528!1.34e-08!34;UBERON:0002020!1.34e-08!34;UBERON:0002780!1.41e-08!41;UBERON:0001890!1.41e-08!41;UBERON:0003080!1.41e-08!41;UBERON:0006240!1.41e-08!41;UBERON:0002791!2.76e-08!32;UBERON:0001869!4.31e-08!32;UBERON:0002050!6.46e-08!564;UBERON:0000922!1.47e-07!592;UBERON:0000923!1.77e-07!560;UBERON:0010316!1.77e-07!560;UBERON:0005291!1.77e-07!560;UBERON:0006598!1.77e-07!560;UBERON:0010317!1.77e-07!560;UBERON:0002532!1.77e-07!560;UBERON:0005423!2.10e-07!581;UBERON:0000956!2.38e-07!25;UBERON:0000203!2.38e-07!25;UBERON:0003056!3.21e-07!61
|tfbs_overrepresentation=0.0196021,0.0774498,6.63941e-05,0.0631091,0.257053,0.363996,0.0569281,0.0358499,0.043387,0.0341265,0.181435,0.288577,0.00293877,0.164339,0.193153,0.0816702,0.183412,0.128744,0.0698403,0.141416,0.243245,0.172742,0.107781,0.124486,0.0550418,0.276459,0.039931,0.119094,0.0186717,0.122514,0.00379621,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.788552,0.0568767,0.157159,0.00398489,0.00836498,0.0326801,0.182216,0.0307461,0.0131764,0.0480278,0.0503649,0.234372,0.145553,0.158244,0.19996,0.0715789,0.0924421,0.12203,0.255843,0.0508907,0.140644,0.273035,0.00550137,0.138225,0.0390464,0.194086,0.0106139,0.0999599,0.0720888,0.0667453,0.115055,0.0792005,0.113084,0.216289,0.0267205,0.0892037,0.116917,0.155921,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.290468,0.0562614,0.150119,0.0114792,0.00723919,0.0848546,0.268505,0.00917415,0.0827752,0.112676,0.0655645,0.12511,0.0626609,0.00654393,0.150351,4.0355e-06,0.0213527,0.121709,0.347653,0.0759036,0.350158,0.184542,0.0491142,0.0437659,0.0541957,0.0883058,0.423154,0.187509,0.34189,0.23573,0.0450707,0.194256,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,2.21676e-05,0.0177346,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.175735,0.078637,0.0985137,0.0755515,0.0302655,0.0142686,0.141472,0.085537,0.0730922,0.0438087,0.0052702,0.0302521,0.166414,0.0378473,0.202388,0.122756,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.258146,0.186826,0.233377,0.0352845,0.0565357,0.000682119,0.0984158,0.29227,0.0683304,0.0447121,0.0473319,0.0081576,0.152417,0.192028,0.346873,0.149398,0.0530169,0.166112,0.0534404,0.392741,0.2321,0.179282,0.052046,0.0715212,0.105131,0.118265,0.0177884,0.234755,0.0288935,0.0472274,0.205973,0.159869,0.0363736,0.15105,0.0970713,0.155237,0.236268,0.0532055,0.000234606,0.224443,0.140245,0.241581,0.160458,0.292792,0.0114296,0.0622664,0.00549132,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,0.0616625,0.0687034,0.0208559,0.265132,0.0288641,0.0606832,0.136664,0.158184,0.147626,0.393313,0.218801,0.00190756,0.132273,0.0830988,0.134907,0.184613,0.0252658,0.202467,0.208718,0.0972471,0.165147,0.180711,0.112956,0.0797807,0.0790532,0.104555,0.00439336,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.334388,0.21183,0.275612,0.235571,0.435782,0.128998,0.109226,0.0121793,0.0169062,0.107176,0.146021,0.129196,0.15291,0.206234,0.238926,0.239646,0.128521,0.1286,0.207017,0.14037,0.259646,0.0916845,2.99669e-05,0.0816983,0.226367,0.211672,0.0147999,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,0.00993324,0.0834863,0.324356,0.545829,0.113754,0.0504034,0.169684,0.0314217,6.14088e-05,0.00122927,0.0122628,0.005515,5.90886e-06,0.179737,0.420045,0.381628,0.332539,0.0457383,0.129819,0.389374,0.594055,0.017212,0.146105,0.413223,0.020249,7.85666e-06,0.0092283,0.369161,0.00558459,0.49089,0.323639,0.00807111,0.00286589,0.122191,0.234628,0.520726,0.143893,0.101233,0.00462477,0.524104,0.132138,0.201843,0.404903,0.00368984,0.257158,0.127765,0.511459,0.586668,0.0588752,0.350886,0.0838963,0.0590382,0.0150105,0.286293,0.0151426,0.127626,0.359128,0.0146894,0.00120797,0.368633,0.547291,0.00119114,0.0364944,0.369971,0.214221,1.65685e-05,0.464342,0.0295245,0.131933,0.00264023,0.0835105,0.0832187,0.00287093,0.349116,0.005939,0.239545,0.432689,0.0845186,7.80963e-05,0.002326,0.0151189,0.0031052,0.00342662,0.0565705,0.0728506,0.210197,0.00187336,0.0883859,0.0962508,0.238465,0.000264631,0.00363392,0.112487,0.159267,0.000870154,0.0907578,0.000838037,0.188468,0.280307,0.393583,0.0228113,0.0596868,0.0984075,0.293026,0.0142709,0.117621,0.23849,0.0799295,0.109146,0.0572193,0.365653,0.0988815,0.00493387,0.35234,0.00195994,0.525923,0.291917,0.421082,0.25441,0.202782,0.307342,0.0378508,0.0594062,0.517001,0.252778,0.266107,0.419676,0.188259,0.0191441,0.477589,0.0260996,0.187849,0.198922,0.321282,0.021087,0.0616078,0.178485,0.329745,0.175552,0.129238,0.651295,0.0793782,0.360161,0.429696,0.000154106,0.0861729,0.00845714,0.239407,0.000554402,0.0106614,0.333725,0.447838,0.0467176,8.61988e-05,0.000104491,0.0233876,0.203356,0.00014407,0.0387162,0.0791459,0.0032633,0.0427118,0.341771,0.106541,0.0939249,0.0727712,0.184395,0.0489035,0.00336238,0.0230652,0.304719,0.000460135,0.296994,0.244339,0.117049,0.0786167,0.629381,0.376317,0.111753,0.00420151,0.020637,0.0563264,0.0330909,0.0498754,0.0115505,0.397546,0.0919254,0.0735469,0.248103,0.102621,0.0760107,0.0188226,0.286156,0.261868,0.184029,0.540322,0.247151,0.146385,0.365815,0.0576261,0.382413,0.164977,0.175633,0.139918,0.34669,0.0828344,0.4729,0.0238089,0.383126,0.0100974,0.48311,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.0340965,0.0199769,0.0660736,0.108971,0.0879235,0.235214,0.000576697,0.0438854,0.417003,0.251882,0.172263,0.243319,0.0637178,0.257309,0.0334797,0.166608,0.227224,0.238082,0.0259579,0.115115,0.124916,0.0149794,0.000404011,0.000512171,0.0695559,0.00641248,0.224626,0.183585,0.0407862,0.03989,0.171436,0.05892,0.0691994,0.268299,0.198844,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.621787,0.178782,0.019419,0.0866228,0.271849,0.282657,0.105411,0.0997542,0.209692,0.0339332,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,0.0593965,0.220368,0.258624,0.064656,0.226143,0.460406,0.0438521,0.0204239,0.281453,0.0522771,0.0787278,0.515487,0.159873,0.0106672,0.143935,0.332403,0.0379537,0.6545,0.187953,0.051459,0.114868,0.0726892,0.18732,0.0589328,0.278397,0.003001,0.0155048,0.487259,3.7789e-05,0.0109447,0.100188,0.223102,0.107653,0.235857,0.103852,0.191914,0.184022,0.00201985,0.182956,0.00710556,0.389792,0.36316,0.0625685,0.124464,0.544477,0.173134,0.101893,0.142875,0.167635,0.171311,0.0721023,0.189107,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.122878,0.0187576,0.0451012,0.0976639,0.0705088,0.0360207,0.00342886,0.0430331,0.0769795,0.155708,0.0336707,0.22995,0.285695,0.0760151,0.0629459,0.486024,0.0803251,0.226641,0.379174,0.0939463,0.0457255,0.367925,0.0471607,0.163865,0.0278061,0.00605585,0.307186,0.265324,0.043404,0.141699,0.00406251,0.142302,0.0653269,0.125712,0.00384141,0.0994829,0.0604041,0.144185,0.0925862,0.289561,0.199201,0.049937,0.172796,0.0595495,0.071232,0.0117528,0.121978,0.22302,0.137423,0.284016,0.0754883,0.299492,0.100006,0.362866,0.197817,0.251078,0.279874,0.00928313,0.016612,0.0022412,0.426452,0.196838,0.0826805,0.246601,0.193021,0.240896,0.0219712,0.0946865,0.120618,0.079499,0.18762,0.195618,0.127688,0.201169,0.0262879,0.24948,0.178639,0.291976,0.00720587,0.364334,0.15547,0.110256,0.101581,0.14794,0.147307,0.0316373,0.225961,0.124417,0.335582,0.00699002,0.182843,0.130771,0.327768,0.135777,0.147842,0.0339286,0.217363,0.119015,0.00709584,0.21618,0.0323312,0.107021,0.00275781,0.20272,0.392453,0.248134,0.0780061,0.315336,0.230477,0.279823,0.00552386,0.502112,0.0103352,0.0478217,0.507599,0.170854,0.0575231,0.174063,0.163504,0.1267,0.54832,0.154964,0.296013,1.44229e-05,0.0434876,0.459994,0.0392766,0.548059,0.25423,0.490559,0.45013,0.500698,0.472542,0.00020295,0.160788,0.529642,1.24344e-05,0.483077,0.224887,0.0147688,0.184287,0.0181844,0.0237007,0.0217959,0.290703,0.00328655,0.0413786,0.478691,0.360199,5.5711e-05,0.0937029,0.000453758,0.365494,0.0244211,2.58105e-05,0.364079,0.0287777,0.0575699,0.00241053,0.569409,0.328518,0.00865679,0.0541711,4.70505e-05,0.142433,9.68504e-05,4.93713e-06,0.209437,2.49014e-05,1.45606e-05,0.0651244,0.000386547,0.12974,5.69321e-05,0.0572388,0.000276195,0.0112416,0.0155453,0.000276758,0.0365695,0.264245,0.379063,0.326516,0.000121546,0.000319705,0.475063,0.202522,0.00120066,0.00598078,0.126097,0.3955,0.442469,0.212239,0.294954,0.156999,0.35974,0.025886,0.39549,0.0298727,0.0011219,5.02151e-05,0.365184,0.15578,0.620526,0.0158343,0.172147,0.0187136,0.00931622,0.479581,0.0181348,0.36666,0.0854676,0.284496,0.16228,0.512178,0.563206,1.67107e-05,0.000199599,0.263302,0.047857,0.180735,0.0182207,0.216102,0.254659,0.109605,0.0149457,3.88453e-06,0.02784,0.417131,0.129731,0.260097,0.503881,0.454761,0.0840572,0.483658,0.452129,0.301581,0.261657,0.346776,0.131322,0.545655,0.438176,0.0696091,0.741477,0.0862349,0.307816,0.0250382,0.386339,0.382854,0.232374,0.478745,0.00289554,0.319747,0.475047,0.197104,0.241014,0.0442299,0.0710918,0.2536,0.246827,0.564333,4.33935e-05,0.387134,0.198743,0.358813,0.668972,0.0554837,0.00520796,0.00937114,0.0243196,0.00956892,0.137708,0.0118751,0.447581,0.0187686,0.254628,0.00910372,0.0286377,0.102411,0.632833,0.0828233,0.387805,0.264038,0.0282238,0.102495,0.00976647,0.263896,0.0446972,0.24452,0.0613938,0.0321969,0.0947248,0.0643357,0.210656,0.0331645,0.211271,0.281295,0.267248,0.118257,0.00817168,0.215123,0.0582227,0.00407337,0.0597961,0.0392149,0.187728,0.0292096,0.249415,0.283107,0.0453548,0.427316,9.51554e-07,0.279553,0.0358792,0.240967,0.160955,0.256687,0.0432189,0.122439,0.16188,0.0025304,0.00521493,0.353147,0.112422,0.170886,0.00399713,0.0560879,0.284866,0.0887542,0.267811,0.338547,0.147872,0.189388,0.293546,0.0238089,0.0478543,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.341188,0.0369803,0.113839,0.201057,0.15696,0.129351,0.141936,0.0786166,0.042497,0.205513,0.0442657,0.251421,0.162089,0.330223,0.0874139,0.233244,0.207281,0.327401,0.195748,0.000364573,0.161712,0.00272873,0.239139,0.095257,0.328852,0.332769,0.262022,0.274403,0.0392261,0.184534,0.248707,0.0567862,0.15156,0.0460134,0.313858,0.0271466,0.25788,0.00116104,0.035332,0.0528669,0.0221551,0.170837,0.327002,0.28543,0.222656,0.00015342,0.127111,0.259989,0.0888526,0.355805,0.0433915,0.108118,0.259901,0.139723,0.0708274,0.0710478,0.196248,0.102645,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.298673,0.244395,0.106889,0.128632,0.0845989,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.0107262,0.0583767,0.00401466,0.117657,0.0486914,0.175784,0.00376397,0.373453,0.0755696,0.00277084,0.0181468,0.0634867,0.325785,0.00352332,0.0472356,0.376537,0.322827,0.229571,0.0105454,0.335984,0.171704,0.208256,0.265058,0.256405,0.362898,0.302133,0.40806,0.151361,0.279606,0.286696,0.150674,0.251128,0.246177,0.35674,0.0737175,0.318525,0.213257,0.287217,0.122782,0.410951,0.289049,0.266974,0.125746,0.00662717,0.398354,0.222091,0.205977,0.34423,0.0936726,0.343425,0.132374,0.045178,0.22741,0.203996,0.276721,0.321965,0.0386145,0.450113
|tfbs_overrepresentation=0.0196021,0.0774498,6.63941e-05,0.0631091,0.257053,0.363996,0.0569281,0.0358499,0.043387,0.0341265,0.181435,0.288577,0.00293877,0.164339,0.193153,0.0816702,0.183412,0.128744,0.0698403,0.141416,0.243245,0.172742,0.107781,0.124486,0.0550418,0.276459,0.039931,0.119094,0.0186717,0.122514,0.00379621,0.149094,0.0239693,0.267529,0.0877018,0.111013,0.788552,0.0568767,0.157159,0.00398489,0.00836498,0.0326801,0.182216,0.0307461,0.0131764,0.0480278,0.0503649,0.234372,0.145553,0.158244,0.19996,0.0715789,0.0924421,0.12203,0.255843,0.0508907,0.140644,0.273035,0.00550137,0.138225,0.0390464,0.194086,0.0106139,0.0999599,0.0720888,0.0667453,0.115055,0.0792005,0.113084,0.216289,0.0267205,0.0892037,0.116917,0.155921,0.00995563,0.0227583,0.126543,0.0578308,0.0493551,0.00965832,0.125428,0.290468,0.0562614,0.150119,0.0114792,0.00723919,0.0848546,0.268505,0.00917415,0.0827752,0.112676,0.0655645,0.12511,0.0626609,0.00654393,0.150351,4.0355e-06,0.0213527,0.121709,0.347653,0.0759036,0.350158,0.184542,0.0491142,0.0437659,0.0541957,0.0883058,0.423154,0.187509,0.34189,0.23573,0.0450707,0.194256,0.0235108,0.132631,0.0447483,0.0270258,0.0748174,0.180926,0.110194,0.215858,2.21676e-05,0.0177346,0.112709,0.134107,0.228632,0.119051,0.0196757,0.110868,0.175735,0.078637,0.0985137,0.0755515,0.0302655,0.0142686,0.141472,0.085537,0.0730922,0.0438087,0.0052702,0.0302521,0.166414,0.0378473,0.202388,0.122756,0.0913381,0.129544,0.110696,0.0515825,0.157774,0.258146,0.186826,0.233377,0.0352845,0.0565357,0.000682119,0.0984158,0.29227,0.0683304,0.0447121,0.0473319,0.0081576,0.152417,0.192028,0.346873,0.149398,0.0530169,0.166112,0.0534404,0.392741,0.2321,0.179282,0.052046,0.0715212,0.105131,0.118265,0.0177884,0.234755,0.0288935,0.0472274,0.205973,0.159869,0.0363736,0.15105,0.0970713,0.155237,0.236268,0.0532055,0.000234606,0.224443,0.140245,0.241581,0.160458,0.292792,0.0114296,0.0622664,0.00549132,0.0795624,0.0891668,0.14349,0.117261,0.0797088,0.0408965,0.0799774,0.177664,0.0616625,0.0687034,0.0208559,0.265132,0.0288641,0.0606832,0.136664,0.158184,0.147626,0.393313,0.218801,0.00190756,0.132273,0.0830988,0.134907,0.184613,0.0252658,0.202467,0.208718,0.0972471,0.165147,0.180711,0.112956,0.0797807,0.0790532,0.104555,0.00439336,0.0553945,0.10068,0.125804,0.122288,0.0624687,0.334388,0.21183,0.275612,0.235571,0.435782,0.128998,0.109226,0.0121793,0.0169062,0.107176,0.146021,0.129196,0.15291,0.206234,0.238926,0.239646,0.128521,0.1286,0.207017,0.14037,0.259646,0.0916845,2.99669e-05,0.0816983,0.226367,0.211672,0.0147999,0.0457509,0.106603,0.106727,0.12083,0.154253,0.0993998,0.00993324,0.0834863,0.324356,0.545829,0.113754,0.0504034,0.169684,0.0314217,6.14088e-05,0.00122927,0.0122628,0.005515,5.90886e-06,0.179737,0.420045,0.381628,0.332539,0.0457383,0.129819,0.389374,0.594055,0.017212,0.146105,0.413223,0.020249,7.85666e-06,0.0092283,0.369161,0.00558459,0.49089,0.323639,0.00807111,0.00286589,0.122191,0.234628,0.520726,0.143893,0.101233,0.00462477,0.524104,0.132138,0.201843,0.404903,0.00368984,0.257158,0.127765,0.511459,0.586668,0.0588752,0.350886,0.0838963,0.0590382,0.0150105,0.286293,0.0151426,0.127626,0.359128,0.0146894,0.00120797,0.368633,0.547291,0.00119114,0.0364944,0.369971,0.214221,1.65685e-05,0.464342,0.0295245,0.131933,0.00264023,0.0835105,0.0832187,0.00287093,0.349116,0.005939,0.239545,0.432689,0.0845186,7.80963e-05,0.002326,0.0151189,0.0031052,0.00342662,0.0565705,0.0728506,0.210197,0.00187336,0.0883859,0.0962508,0.238465,0.000264631,0.00363392,0.112487,0.159267,0.000870154,0.0907578,0.000838037,0.188468,0.280307,0.393583,0.0228113,0.0596868,0.0984075,0.293026,0.0142709,0.117621,0.23849,0.0799295,0.109146,0.0572193,0.365653,0.0988815,0.00493387,0.35234,0.00195994,0.525923,0.291917,0.421082,0.25441,0.202782,0.307342,0.0378508,0.0594062,0.517001,0.252778,0.266107,0.419676,0.188259,0.0191441,0.477589,0.0260996,0.187849,0.198922,0.321282,0.021087,0.0616078,0.178485,0.329745,0.175552,0.129238,0.651295,0.0793782,0.360161,0.429696,0.000154106,0.0861729,0.00845714,0.239407,0.000554402,0.0106614,0.333725,0.447838,0.0467176,8.61988e-05,0.000104491,0.0233876,0.203356,0.00014407,0.0387162,0.0791459,0.0032633,0.0427118,0.341771,0.106541,0.0939249,0.0727712,0.184395,0.0489035,0.00336238,0.0230652,0.304719,0.000460135,0.296994,0.244339,0.117049,0.0786167,0.629381,0.376317,0.111753,0.00420151,0.020637,0.0563264,0.0330909,0.0498754,0.0115505,0.397546,0.0919254,0.0735469,0.248103,0.102621,0.0760107,0.0188226,0.286156,0.261868,0.184029,0.540322,0.247151,0.146385,0.365815,0.0576261,0.382413,0.164977,0.175633,0.139918,0.34669,0.0828344,0.4729,0.0238089,0.383126,0.0100974,0.48311,0.0614918,0.219485,0.149782,0.136923,0.118103,0.113892,0.207214,0.140201,0.0580534,0.00518407,0.161297,0.168389,0.270152,0.0340965,0.0199769,0.0660736,0.108971,0.0879235,0.235214,0.000576697,0.0438854,0.417003,0.251882,0.172263,0.243319,0.0637178,0.257309,0.0334797,0.166608,0.227224,0.238082,0.0259579,0.115115,0.124916,0.0149794,0.000404011,0.000512171,0.0695559,0.00641248,0.224626,0.183585,0.0407862,0.03989,0.171436,0.05892,0.0691994,0.268299,0.198844,0.104946,0.127738,0.207615,0.161213,0.118999,0.0737069,0.357807,0.621787,0.178782,0.019419,0.0866228,0.271849,0.282657,0.105411,0.0997542,0.209692,0.0339332,0.0725263,0.102587,0.0742013,0.0552936,0.0457886,0.0514927,0.0593965,0.220368,0.258624,0.064656,0.226143,0.460406,0.0438521,0.0204239,0.281453,0.0522771,0.0787278,0.515487,0.159873,0.0106672,0.143935,0.332403,0.0379537,0.6545,0.187953,0.051459,0.114868,0.0726892,0.18732,0.0589328,0.278397,0.003001,0.0155048,0.487259,3.7789e-05,0.0109447,0.100188,0.223102,0.107653,0.235857,0.103852,0.191914,0.184022,0.00201985,0.182956,0.00710556,0.389792,0.36316,0.0625685,0.124464,0.544477,0.173134,0.101893,0.142875,0.167635,0.171311,0.0721023,0.189107,0.0685131,0.130287,0.0661526,0.0815772,0.0993937,0.122878,0.0187576,0.0451012,0.0976639,0.0705088,0.0360207,0.00342886,0.0430331,0.0769795,0.155708,0.0336707,0.22995,0.285695,0.0760151,0.0629459,0.486024,0.0803251,0.226641,0.379174,0.0939463,0.0457255,0.367925,0.0471607,0.163865,0.0278061,0.00605585,0.307186,0.265324,0.043404,0.141699,0.00406251,0.142302,0.0653269,0.125712,0.00384141,0.0994829,0.0604041,0.144185,0.0925862,0.289561,0.199201,0.049937,0.172796,0.0595495,0.071232,0.0117528,0.121978,0.22302,0.137423,0.284016,0.0754883,0.299492,0.100006,0.362866,0.197817,0.251078,0.279874,0.00928313,0.016612,0.0022412,0.426452,0.196838,0.0826805,0.246601,0.193021,0.240896,0.0219712,0.0946865,0.120618,0.079499,0.18762,0.195618,0.127688,0.201169,0.0262879,0.24948,0.178639,0.291976,0.00720587,0.364334,0.15547,0.110256,0.101581,0.14794,0.147307,0.0316373,0.225961,0.124417,0.335582,0.00699002,0.182843,0.130771,0.327768,0.135777,0.147842,0.0339286,0.217363,0.119015,0.00709584,0.21618,0.0323312,0.107021,0.00275781,0.20272,0.392453,0.248134,0.0780061,0.315336,0.230477,0.279823,0.00552386,0.502112,0.0103352,0.0478217,0.507599,0.170854,0.0575231,0.174063,0.163504,0.1267,0.54832,0.154964,0.296013,1.44229e-05,0.0434876,0.459994,0.0392766,0.548059,0.25423,0.490559,0.45013,0.500698,0.472542,0.00020295,0.160788,0.529642,1.24344e-05,0.483077,0.224887,0.0147688,0.184287,0.0181844,0.0237007,0.0217959,0.290703,0.00328655,0.0413786,0.478691,0.360199,5.5711e-05,0.0937029,0.000453758,0.365494,0.0244211,2.58105e-05,0.364079,0.0287777,0.0575699,0.00241053,0.569409,0.328518,0.00865679,0.0541711,4.70505e-05,0.142433,9.68504e-05,4.93713e-06,0.209437,2.49014e-05,1.45606e-05,0.0651244,0.000386547,0.12974,5.69321e-05,0.0572388,0.000276195,0.0112416,0.0155453,0.000276758,0.0365695,0.264245,0.379063,0.326516,0.000121546,0.000319705,0.475063,0.202522,0.00120066,0.00598078,0.126097,0.3955,0.442469,0.212239,0.294954,0.156999,0.35974,0.025886,0.39549,0.0298727,0.0011219,5.02151e-05,0.365184,0.15578,0.620526,0.0158343,0.172147,0.0187136,0.00931622,0.479581,0.0181348,0.36666,0.0854676,0.284496,0.16228,0.512178,0.563206,1.67107e-05,0.000199599,0.263302,0.047857,0.180735,0.0182207,0.216102,0.254659,0.109605,0.0149457,3.88453e-06,0.02784,0.417131,0.129731,0.260097,0.503881,0.454761,0.0840572,0.483658,0.452129,0.301581,0.261657,0.346776,0.131322,0.545655,0.438176,0.0696091,0.741477,0.0862349,0.307816,0.0250382,0.386339,0.382854,0.232374,0.478745,0.00289554,0.319747,0.475047,0.197104,0.241014,0.0442299,0.0710918,0.2536,0.246827,0.564333,4.33935e-05,0.387134,0.198743,0.358813,0.668972,0.0554837,0.00520796,0.00937114,0.0243196,0.00956892,0.137708,0.0118751,0.447581,0.0187686,0.254628,0.00910372,0.0286377,0.102411,0.632833,0.0828233,0.387805,0.264038,0.0282238,0.102495,0.00976647,0.263896,0.0446972,0.24452,0.0613938,0.0321969,0.0947248,0.0643357,0.210656,0.0331645,0.211271,0.281295,0.267248,0.118257,0.00817168,0.215123,0.0582227,0.00407337,0.0597961,0.0392149,0.187728,0.0292096,0.249415,0.283107,0.0453548,0.427316,9.51554e-07,0.279553,0.0358792,0.240967,0.160955,0.256687,0.0432189,0.122439,0.16188,0.0025304,0.00521493,0.353147,0.112422,0.170886,0.00399713,0.0560879,0.284866,0.0887542,0.267811,0.338547,0.147872,0.189388,0.293546,0.0238089,0.0478543,0.218414,0.0509944,0.0871471,0.0689852,0.0602698,0.341188,0.0369803,0.113839,0.201057,0.15696,0.129351,0.141936,0.0786166,0.042497,0.205513,0.0442657,0.251421,0.162089,0.330223,0.0874139,0.233244,0.207281,0.327401,0.195748,0.000364573,0.161712,0.00272873,0.239139,0.095257,0.328852,0.332769,0.262022,0.274403,0.0392261,0.184534,0.248707,0.0567862,0.15156,0.0460134,0.313858,0.0271466,0.25788,0.00116104,0.035332,0.0528669,0.0221551,0.170837,0.327002,0.28543,0.222656,0.00015342,0.127111,0.259989,0.0888526,0.355805,0.0433915,0.108118,0.259901,0.139723,0.0708274,0.0710478,0.196248,0.102645,0.0539258,0.0709978,0.401939,0.332746,0.271338,0.242121,0.298673,0.244395,0.106889,0.128632,0.0845989,0.159153,0.0842401,0.13698,0.0874421,0.100355,0.167854,0.0107262,0.0583767,0.00401466,0.117657,0.0486914,0.175784,0.00376397,0.373453,0.0755696,0.00277084,0.0181468,0.0634867,0.325785,0.00352332,0.0472356,0.376537,0.322827,0.229571,0.0105454,0.335984,0.171704,0.208256,0.265058,0.256405,0.362898,0.302133,0.40806,0.151361,0.279606,0.286696,0.150674,0.251128,0.246177,0.35674,0.0737175,0.318525,0.213257,0.287217,0.122782,0.410951,0.289049,0.266974,0.125746,0.00662717,0.398354,0.222091,0.205977,0.34423,0.0936726,0.343425,0.132374,0.045178,0.22741,0.203996,0.276721,0.321965,0.0386145,0.450113
|tfbs_overrepresentation_for_novel_motifs=0.590005,1.54039,0.581696,0.741427,0.534346,0.739643,0.821651,0.395818,0.392841,0.462021,0.706765,0.867962,0.341754,0.809319,0.532789,0.559384,1.05593,0.471262,0.938585,0.223552,0.581762,0.169357,0.731221,1.3102,0.632849,0.892087,0.316693,0.728867,0.537869,0.297585,0.682839,1.09415,1.10579,0.344471,0.49475,1.49582,0.491074,0.740899,0.463978,0.371755,0.493145,0.66492,0.539378,0.53106,0.0946706,0.61613,0.822818,0.694903,0.515703,0.538016,0.90714,0.83543,1.29278,1.17354,1.33024,0.812467,1.34056,0.777235,0.297448,0.776148,1.13655,0.825354,0.393426,1.02706,0.844545,0.991076,1.42026,1.79268,1.08337,1.62905,0.650393,0.402607,0.248021,1.32819,0.336329,0.321165,0.305238,1.00941,1.08,0.62601,0.362435,1.02594,0.844168,0.399165,1.27559,0.109222,0.221873,4.99255,0.934646,1.89266,1.51507,1.24792,1.11156,0.441618,0.535192,0.456994,0.934671,1.15558,0.939507,0.272395,0.465545,1.1057,1.14983,1.05974,0.979006,0.701817,1.04326,0.805616,0.632569,0.516141,0.594299,1.14697,0.575476,0.717043,1.46636,0.489254,0.393155,0.681522,0.988625,0.444962,1.31973,0.932085,0.736652,0.856196,1.57854,1.0102,0.814847,1.11673,1.36323,1.15964,1.24863,0.68598,1.37788,0.852645,1.52813,1.41398,0.676268,0.729481,1.48509,2.34913,1.94535,1.44718,0.8167,1.15194,0.980848,0.768101,0.963351,2.1895,0.661255,0.437774,0.66252,0.175846,1.24902,0.997363,1.92786,1.65997,0.917558,0.518428,0.632914,0.600782,1.44595,1.23002,1.07918,0.604379,0.997702,0.843324,0.423521,0.820225,0.0401987
}}
}}

Revision as of 15:31, 26 November 2012


Full id: C2457_smooth_skeletal_heart_tongue_bladder_left_penis



Phase1 CAGE Peaks

Hg19::chr18:32173276..32173349,+p4@DTNA
Hg19::chr20:42815767..42815787,-p2@JPH2
Hg19::chr20:42815793..42815838,-p1@JPH2
Hg19::chr22:36291077..36291106,-p@chr22:36291077..36291106
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0007274neuromuscular synaptic transmission0.013538769153234
GO:0033017sarcoplasmic reticulum membrane0.013538769153234
GO:0016528sarcoplasm0.0169197246432026
GO:0016529sarcoplasmic reticulum0.0169197246432026
GO:0006941striated muscle contraction0.0200294144821643



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
adult organism9.22e-33114
organ system subdivision1.32e-15223
multi-tissue structure1.65e-15342
ectoderm-derived structure6.58e-14171
ectoderm6.58e-14171
presumptive ectoderm6.58e-14171
structure with developmental contribution from neural crest3.85e-13132
neural tube2.58e-1256
neural rod2.58e-1256
future spinal cord2.58e-1256
neural keel2.58e-1256
organ2.90e-12503
organ part3.19e-12218
central nervous system3.94e-1281
neural plate8.53e-1282
presumptive neural plate8.53e-1282
regional part of nervous system1.72e-1153
regional part of brain1.72e-1153
nervous system4.79e-1189
multi-cellular organism4.88e-11656
neurectoderm1.03e-1086
ecto-epithelium1.27e-10104
brain1.62e-1068
future brain1.62e-1068
anatomical system1.93e-09624
anatomical group2.66e-09625
anatomical cluster5.65e-09373
telencephalon7.99e-0934
brain grey matter1.34e-0834
gray matter1.34e-0834
regional part of forebrain1.41e-0841
forebrain1.41e-0841
anterior neural tube1.41e-0841
future forebrain1.41e-0841
regional part of telencephalon2.76e-0832
cerebral hemisphere4.31e-0832
embryonic structure6.46e-08564
embryo1.47e-07592
germ layer1.77e-07560
germ layer / neural crest1.77e-07560
embryonic tissue1.77e-07560
presumptive structure1.77e-07560
germ layer / neural crest derived structure1.77e-07560
epiblast (generic)1.77e-07560
developing anatomical structure2.10e-07581
cerebral cortex2.38e-0725
pallium2.38e-0725
pre-chordal neural plate3.21e-0761


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

This analysis result is provided for C0 - C305 clusters.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=Coexpression_cluster:C2457&oldid=2558794"