NonredundantMotifs:116

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known116
• db :SWISSREGULON
• Id :CDC5L.p2
• name  :
• score :0.04744553038122821
  
• External refs:

• Internal refs:

Motif matrix

PO A C G T 1 17.811892 23.718126 235.57367 20.216234 2 189.5473 20.427225 23.359456 63.985941 3 28.064217 7.052422 65.435993 196.76729 4 12.386786 6.521042 12.166767 266.245327 5 28.45556 4.536592 3.368424 260.959346 6 285.785454 4.314371 3.071382 4.148715 7 257.17135 15.935174 5.185202 19.028196 8 56.399198 122.126412 7.639521 111.154791 9 209.108851 7.714919 49.149441 31.346711 10 27.864448 38.655092 6.287882 224.5125 11 240.21541 14.125543 35.257974 7.720995 12 210.10813 6.228612 50.970281 30.012899