Template:Known motif: Difference between revisions
From FANTOM5_SSTAR
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motif_id = motif_prefix; | motif_id = motif_prefix; | ||
var ret =""; | var ret =""; | ||
if(motif_db=="HOCOMOCO" || motif_db=="UNIPROBE") | if(motif_db=="HOCOMOCO" || motif_db=="UNIPROBE" || motif_db=="HOMER") | ||
ret=motif_id.split(/_(.+)?/)[0]; | ret=motif_id.split(/_(.+)?/)[0]; | ||
else if (motif_db=="SWISSREGULON") | else if (motif_db=="SWISSREGULON"){ | ||
var i = motif_id.lastIndexOf('.'); | |||
if (i != -1) { | |||
ret= motif_id.substr(0, i) ; | |||
} | |||
} | |||
else ret =""; | else ret =""; | ||
return ret;} | return ret; | ||
} | |||
}, | }, | ||
{"aTargets":[3],"sTitle": "Sequence logo","fnRender": function (obj) { | {"aTargets":[3],"sTitle": "Sequence logo","fnRender": function (obj) { | ||
Revision as of 15:12, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy <br>208 clusters of known motifs (with the phase1 procedure <br> to select representative cluster members based on motif-promoter corelations
- Name :{{{name}}}
- db :{{{representative_motif_db}}}
- Id :{{{representative_motif_id}}}
- name :{{{representative_motif_name}}}
- score :{{{score}}}
- Entry name : {{{uniprot_entry_name}}}
- Entrez GeneID :{{{entrez_gene_id}}}
| Motif matrix | |
|---|---|
|
Sub Motif Members
