NonredundantMotifs:162

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant162
• db :UNIPROBE
• Id :Zfp410_primary
• name :SCI09
• score :0.04967759772555392
  
• External refs:

EntrezGene:52708
UniProt:52708

• Internal refs:

EntrezGene:52708

Motif matrix

P0 A C G T 1 0.302837036138041 0.133017312625379 0.249940395248547 0.314205255988032 2 0.378542453004856 0.186425076750127 0.250700468152263 0.184332002092754 3 0.184780289293993 0.14432869244423 0.262765816169118 0.408125202092659 4 0.308569123103014 0.0396893741777204 0.23569454740916 0.416046955310106 5 0.817738207507899 0.108937519917377 0.0334190041243113 0.039905268450413 6 0.0189957850454361 0.00771753143537699 0.0131747210139339 0.960111962505253 7 0.00927829984012204 0.00242168301816977 0.973921136380392 0.0143788807613158 8 0.00558670315623552 0.00269279389895423 0.985087527201199 0.00663297574361129 9 0.00587449980521611 0.00423163770344787 0.976926589855096 0.0129672726362398 10 0.951308501699254 0.0118353104798848 0.0231871504323771 0.0136690373884841 11 0.00592674827796239 0.0045208282327493 0.00570133485075152 0.983851088638537 12 0.14644264159935 0.0030086726877293 0.840719916524429 0.00982876918849116 13 0.00255263308705335 0.0445038139749355 0.54205905494164 0.410884497996371 14 0.406298884425704 0.375782081686115 0.133921837053274 0.0839971968349069 15 0.256883838124998 0.160184335520992 0.271190018902857 0.311741807451154 16 0.388380544558878 0.141810861330292 0.214600139149806 0.255208454961024 17 0.34087692765387 0.27438684420453 0.205584866843467 0.179151361298133