FFCP PHASE1:Hg19::chr12:16109519..16109568,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=51071 | |EntrezGene=51071 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24269 | |HGNC=24269 | ||
|TSSclassifier=W | |||
|UniProt=G3V158 | |UniProt=G3V158 | ||
|association_with_transcript=0bp_to_ENST00000526530_5end | |association_with_transcript=0bp_to_ENST00000526530_5end | ||
Revision as of 10:54, 6 July 2013
| Short description: | p6@DERA |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_DERA_5end |
| Coexpression cluster: | C182_renal_mature_mesothelioma_lung_Mammary_Adipocyte_acute |
| Association with transcript: | 0bp_to_ENST00000526530_5end |
| EntrezGene: | DERA |
| HGNC: | 24269 |
| UniProt: | G3V158 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@DERA |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cardiac muscle cell | 8.17e-11 | 3 |
| cardiac muscle myoblast | 8.17e-11 | 3 |
| striated muscle cell | 1.96e-08 | 4 |
| kidney cell | 1.02e-07 | 17 |
| kidney epithelial cell | 1.02e-07 | 17 |
| Ontology term | p-value | n |
|---|---|---|
| kidney | 1.40e-10 | 26 |
| kidney mesenchyme | 1.40e-10 | 26 |
| upper urinary tract | 1.40e-10 | 26 |
| kidney rudiment | 1.40e-10 | 26 |
| kidney field | 1.40e-10 | 26 |
| cavitated compound organ | 5.54e-09 | 31 |
| abdomen element | 6.69e-09 | 54 |
| abdominal segment element | 6.69e-09 | 54 |
| abdominal segment of trunk | 4.71e-08 | 60 |
| abdomen | 4.71e-08 | 60 |
| Ontology term | p-value | n |
|---|---|---|
| clear cell adenocarcinoma | 1.78e-15 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
