FFCP PHASE1:Hg19::chr19:55691488..55691551,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6861 | |EntrezGene=6861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11513 | |HGNC=11513 | ||
|TSSclassifier=S | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000537500_5end | |association_with_transcript=-16bp_to_ENST00000537500_5end | ||
Revision as of 20:37, 8 July 2013
| Short description: | p1@SYT5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_SYT5_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | -16bp_to_ENST00000537500_5end |
| EntrezGene: | SYT5 |
| HGNC: | 11513 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SYT5 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 1.86e-73 | 56 |
| neural rod | 1.86e-73 | 56 |
| future spinal cord | 1.86e-73 | 56 |
| neural keel | 1.86e-73 | 56 |
| regional part of nervous system | 1.62e-71 | 53 |
| regional part of brain | 1.62e-71 | 53 |
| central nervous system | 5.26e-69 | 81 |
| nervous system | 1.60e-67 | 89 |
| regional part of forebrain | 7.75e-65 | 41 |
| forebrain | 7.75e-65 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
