FFCP PHASE1:Hg19::chr7:49813226..49813252,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=375567 | |EntrezGene=375567 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30200 | |HGNC=30200 | ||
|TSSclassifier=S | |||
|UniProt=Q2TAL6 | |UniProt=Q2TAL6 | ||
|association_with_transcript=-4bp_to_ENST00000340652,NM_198570,uc003tot.1_5end | |association_with_transcript=-4bp_to_ENST00000340652,NM_198570,uc003tot.1_5end | ||
Revision as of 11:01, 10 July 2013
| Short description: | p1@VWC2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_VWC2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -4bp_to_ENST00000340652, NM_198570, uc003tot.1_5end |
| EntrezGene: | VWC2 |
| HGNC: | 30200 |
| UniProt: | Q2TAL6 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@VWC2 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mast cell | 8.56e-13 | 5 |
| basophil mast progenitor cell | 8.56e-13 | 5 |
| endocrine cell | 4.09e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 3.32e-59 | 56 |
| neural rod | 3.32e-59 | 56 |
| future spinal cord | 3.32e-59 | 56 |
| neural keel | 3.32e-59 | 56 |
| regional part of nervous system | 9.08e-59 | 53 |
| regional part of brain | 9.08e-59 | 53 |
| brain | 1.21e-53 | 68 |
| future brain | 1.21e-53 | 68 |
| central nervous system | 5.26e-53 | 81 |
| regional part of forebrain | 8.46e-53 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
