FFCP PHASE1:Hg19::chr10:75541796..75541836,+: Difference between revisions
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{{FFCP | 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21,21.577062768836,31.6492265438428,14.2769420259154,45.4423936659749,41.8792517884478,125.64858998735,44.2463301355795,48.4355261243302,66.2745529017697,38.9875795347898,21.5853642362368,55.065483756061,61.7396068874143,55.5242192300616,48.9678033355189,52.7846227794852,19.5858995393344,33.5863582403954,23.1489212081326,19.2149904887538,41.5700854853847,50.9879723177179,31.2613042385255,30.601596518574,45.6111866673355,33.2135138244538,26.2301303330683,49.7711795474038,27.7747873448583,33.5294959214775,48.2830407858715,32.9256978119843,16.5846148463469,23.2177890676857,74.8167012795519,263.284728278528,24.9608035264635,26.3954191058883,53.8122553562475,54.7895232305697,57.2208116729347,60.6744643616554,20.9426274437603,59.5711316232379,61.259231169002,57.1993715875486,62.5334864489597,36.6772610568575,35.8508801897295,41.4755797088455,43.8831905996683,45.9128162834594,30.6768257132968,41.915317968902,63.92081632379,56.4575621909062,80.2652708741044,41.1627989015876,37.1007883065618,58.3986860665071,71.2171720906684,31.0041676705866,46.392577253528,59.7424521462742,60.5903210366854,36.209041079369,65.7628101999954,25.525814540805,26.6056050523938,30.3435315569014,34.2653261999274,85.8939072780552,53.1458544888521,31.6241335062538,54.6769589275772,32.9798224753108,21.3873408235502,50.718687310008,56.9255834204187,30.0748537535531,24.9452026457744,59.4649877753327,28.5686301769052,55.7573897310793,79.0377461888307,56.2359018949818,39.909447656195,25.6577853841098,78.4124664100128,25.2928343510203,55.8528883635683,47.612415646386,63.2391530883477,48.0662653776675,58.8372124488353,83.7745060904924,66.8705300417817,72.8516380815763,66.5987058215141,51.0385244057221,40.4337557953318,64.6825451374328,27.8107822460939,42.3383325646762,41.458471972939,23.9964550399597,34.5439050679589,54.7548192366603,25.5772082950584,20.1742821461538,46.7589866961158,40.2250040318002,54.5716410187192,45.285083562568,113.963689261399,27.0081732588496,35.9328249017309,58.2155623955523,37.2826970238263,48.027305644972,131.289151955119,66.0215235483414,53.9674167527945,20.0475968459901,53.7102955376775,27.9617845157915,31.3987118002001,68.2810888605886|short_description=p1@CHCHD1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=118487 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23518 | |||
|TSSclassifier=S | |||
|UniProt=Q96BP2,A6NJX6 | |||
|association_with_transcript=0bp_to_ENST00000372833,ENST00000372837,NM_203298,uc001jvb.2,uc001jvc.3_5end | |||
|description=CAGE_peak_1_at_CHCHD1_5end | |||
|id=chr10:75541796..75541836,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.08e-19!254;CL:0000548!1.18e-13!679;CL:0000004!1.18e-13!679;CL:0000255!1.18e-13!679;CL:0000012!4.20e-13!682;CL:0002321!7.39e-13!248;CL:0000220!1.63e-12!246;CL:0000222!1.22e-07!119;CL:1000449!4.81e-07!16;CL:1000497!6.16e-07!18;CL:0002518!6.16e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.63e-07;15!CL:1000497;2.32e-07;17!CL:0002518;2.32e-07;17!CL:0002681;3.96e-07;12!CL:0002584;3.96e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.52e-20,253;CL:0002321,4.01e-13,250;CL:0000222,7.21e-08,121;CL:1000449,1.60e-07,15;CL:1000497,2.33e-07,17;CL:0002518,2.33e-07,17;CL:0002681,4.06e-07,12;CL:0002584,4.06e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.61e-11!239;DOID:162!4.11e-11!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.61e-11,239;DOID:162,4.11e-11,235 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.08e-09!238;UBERON:0009142!1.08e-09!238;UBERON:0005256!1.53e-08!143;UBERON:0002100!1.74e-08!216;UBERON:0000353!3.21e-07!17;UBERON:0004211!4.81e-07!16;UBERON:0001285!4.81e-07!16;UBERON:0007684!4.81e-07!16;UBERON:0003220!4.81e-07!16;UBERON:0004208!4.81e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;7.81e-08;15!UBERON:0006555;1.63e-07;15!UBERON:0004819;1.63e-07;15!UBERON:0001285;1.63e-07;15!UBERON:0007684;1.63e-07;15!UBERON:0001225;3.96e-07;12!UBERON:0008987;3.96e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.47e-08,199;UBERON:0000353,8.27e-08,15;UBERON:0004211,1.60e-07,15;UBERON:0009773,1.60e-07,15;UBERON:0001231,1.60e-07,15;UBERON:0001285,1.60e-07,15;UBERON:0007684,1.60e-07,15;UBERON:0004208,1.60e-07,15;UBERON:0003104,2.49e-07,160;UBERON:0009142,2.49e-07,160;UBERON:0001225,4.06e-07,12;UBERON:0008987,4.06e-07,12;UBERON:0006555,9.10e-07,16;UBERON:0004819,9.10e-07,16 | |||
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| |||
|short_description=p1@CHCHD1 | |||
}} |
Revision as of 14:23, 10 September 2013
Short description: | p1@CHCHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CHCHD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372833, ENST00000372837, NM_203298, uc001jvb.2, uc001jvc.3_5end |
EntrezGene: | CHCHD1 |
HGNC: | 23518 |
UniProt: | Q96BP2A6NJX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.52e-20 | 253 |
embryonic cell | 4.01e-13 | 250 |
mesodermal cell | 7.21e-08 | 121 |
epithelial cell of nephron | 1.60e-07 | 15 |
kidney cell | 2.33e-07 | 17 |
kidney epithelial cell | 2.33e-07 | 17 |
kidney cortical cell | 4.06e-07 | 12 |
renal cortical epithelial cell | 4.06e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk | 6.47e-08 | 199 |
parenchyma | 8.27e-08 | 15 |
nephron epithelium | 1.60e-07 | 15 |
renal tubule | 1.60e-07 | 15 |
nephron tubule | 1.60e-07 | 15 |
nephron | 1.60e-07 | 15 |
uriniferous tubule | 1.60e-07 | 15 |
nephrogenic mesenchyme | 1.60e-07 | 15 |
mesenchyme | 2.49e-07 | 160 |
entire embryonic mesenchyme | 2.49e-07 | 160 |
cortex of kidney | 4.06e-07 | 12 |
renal parenchyma | 4.06e-07 | 12 |
excretory tube | 9.10e-07 | 16 |
kidney epithelium | 9.10e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.61e-11 | 239 |
cancer | 4.11e-11 | 235 |
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