FFCP PHASE1:Hg19::chr11:120484784..120484795,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C342|description=CAGE_peak_at_chr11:120484784..120484795,+|id=chr11:120484784..120484795,+|ontology_enrichment_celltype=CL:0000945!3.65e-14!24;CL:0000826!3.65e-14!24;CL:0000838!6.44e-11!52;CL:0000542!1.08e-10!53;CL:0000051!1.08e-10!53;CL:0000946!1.21e-10!1;CL:0000786!1.21e-10!1;CL:0000980!1.21e-10!1;CL:0000080!3.92e-07!6|ontology_enrichment_celltype_v019=CL:0000945;1.46e-22;24!CL:0000542;5.74e-09;53|ontology_enrichment_celltype_v019_2=CL:0000945,1.63e-22,24;CL:0000826,1.63e-22,24;CL:0000838,2.52e-16,52;CL:0000542,5.00e-16,53;CL:0000051,5.00e-16,53;CL:0002087,1.48e-07,115;CL:0002031,2.95e-07,120|ontology_enrichment_development_v019=CL:0000051;5.74e-09;53|ontology_enrichment_disease=DOID:630!2.53e-11!1;DOID:0050177!2.53e-11!1;DOID:0050427!2.53e-11!1;DOID:0060060!3.08e-11!1;DOID:0060061!3.08e-11!1;DOID:8691!3.08e-11!1;DOID:0060058!2.96e-09!10|ontology_enrichment_disease_v019=DOID:630;2.18e-34;1!DOID:0050177;2.18e-34;1!DOID:0050427;2.18e-34;1!DOID:0060060;5.97e-34;1!DOID:0060061;5.97e-34;1!DOID:8691;5.97e-34;1!DOID:0060058;3.71e-14;10|ontology_enrichment_disease_v019_2=DOID:630,1.84e-34,1;DOID:0050177,1.84e-34,1;DOID:0050427,1.84e-34,1;DOID:0060060,3.61e-34,1;DOID:0060061,3.61e-34,1;DOID:8691,3.61e-34,1;DOID:0060058,3.25e-14,10|ontology_enrichment_uberon=UBERON:0004177!7.68e-34!7;UBERON:0002106!1.98e-29!3;UBERON:0004854!1.98e-29!3;UBERON:0009034!1.98e-29!3;UBERON:0002095!1.98e-29!3;UBERON:0004782!1.98e-29!3;UBERON:0003281!1.98e-29!3;UBERON:0009664!1.98e-29!3;UBERON:0002296!1.98e-29!3;UBERON:0005602!1.98e-29!3;UBERON:0001179!1.98e-29!3;UBERON:0006293!1.98e-29!3;UBERON:0000945!2.01e-11!8;UBERON:0010039!2.01e-11!8;UBERON:0000029!6.77e-11!1;UBERON:0002372!1.77e-10!1;UBERON:0001961!1.77e-10!1;UBERON:0001744!1.77e-10!1;UBERON:0001735!1.77e-10!1;UBERON:0002370!2.36e-10!4;UBERON:0005058!2.36e-10!4;UBERON:0009113!2.36e-10!4;UBERON:0003295!2.36e-10!4;UBERON:0005562!2.36e-10!4;UBERON:0005057!4.65e-09!26;UBERON:0001042!5.94e-09!10;UBERON:0009145!5.94e-09!10;UBERON:0006562!3.49e-08!11;UBERON:0004457!8.78e-08!12;UBERON:0000042!8.78e-08!12;UBERON:0003351!3.46e-07!6|ontology_enrichment_uberon_v019=UBERON:0002106;2.74e-12;3!UBERON:0004177;6.78e-08;5!UBERON:0005057;6.78e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.59e-12,3;UBERON:0004854,2.59e-12,3;UBERON:0009034,2.59e-12,3;UBERON:0002095,2.59e-12,3;UBERON:0004782,2.59e-12,3;UBERON:0003281,2.59e-12,3;UBERON:0009664,2.59e-12,3;UBERON:0002296,2.59e-12,3;UBERON:0005602,2.59e-12,3;UBERON:0001179,2.59e-12,3;UBERON:0006293,2.59e-12,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,2.13461532569859,1.25937250101887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.515663103788617,1.79894080664872,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.258355639344024,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,2.56454793842586|short_description=p@chr11:120484784..120484795,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_at_chr11:120484784..120484795,+ | |||
|id=chr11:120484784..120484795,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.65e-14!24;CL:0000826!3.65e-14!24;CL:0000838!6.44e-11!52;CL:0000542!1.08e-10!53;CL:0000051!1.08e-10!53;CL:0000946!1.21e-10!1;CL:0000786!1.21e-10!1;CL:0000980!1.21e-10!1;CL:0000080!3.92e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.46e-22;24!CL:0000542;5.74e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.63e-22,24;CL:0000826,1.63e-22,24;CL:0000838,2.52e-16,52;CL:0000542,5.00e-16,53;CL:0000051,5.00e-16,53;CL:0002087,1.48e-07,115;CL:0002031,2.95e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;5.74e-09;53 | |||
|ontology_enrichment_disease=DOID:630!2.53e-11!1;DOID:0050177!2.53e-11!1;DOID:0050427!2.53e-11!1;DOID:0060060!3.08e-11!1;DOID:0060061!3.08e-11!1;DOID:8691!3.08e-11!1;DOID:0060058!2.96e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:630;2.18e-34;1!DOID:0050177;2.18e-34;1!DOID:0050427;2.18e-34;1!DOID:0060060;5.97e-34;1!DOID:0060061;5.97e-34;1!DOID:8691;5.97e-34;1!DOID:0060058;3.71e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.84e-34,1;DOID:0050177,1.84e-34,1;DOID:0050427,1.84e-34,1;DOID:0060060,3.61e-34,1;DOID:0060061,3.61e-34,1;DOID:8691,3.61e-34,1;DOID:0060058,3.25e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.68e-34!7;UBERON:0002106!1.98e-29!3;UBERON:0004854!1.98e-29!3;UBERON:0009034!1.98e-29!3;UBERON:0002095!1.98e-29!3;UBERON:0004782!1.98e-29!3;UBERON:0003281!1.98e-29!3;UBERON:0009664!1.98e-29!3;UBERON:0002296!1.98e-29!3;UBERON:0005602!1.98e-29!3;UBERON:0001179!1.98e-29!3;UBERON:0006293!1.98e-29!3;UBERON:0000945!2.01e-11!8;UBERON:0010039!2.01e-11!8;UBERON:0000029!6.77e-11!1;UBERON:0002372!1.77e-10!1;UBERON:0001961!1.77e-10!1;UBERON:0001744!1.77e-10!1;UBERON:0001735!1.77e-10!1;UBERON:0002370!2.36e-10!4;UBERON:0005058!2.36e-10!4;UBERON:0009113!2.36e-10!4;UBERON:0003295!2.36e-10!4;UBERON:0005562!2.36e-10!4;UBERON:0005057!4.65e-09!26;UBERON:0001042!5.94e-09!10;UBERON:0009145!5.94e-09!10;UBERON:0006562!3.49e-08!11;UBERON:0004457!8.78e-08!12;UBERON:0000042!8.78e-08!12;UBERON:0003351!3.46e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.74e-12;3!UBERON:0004177;6.78e-08;5!UBERON:0005057;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.59e-12,3;UBERON:0004854,2.59e-12,3;UBERON:0009034,2.59e-12,3;UBERON:0002095,2.59e-12,3;UBERON:0004782,2.59e-12,3;UBERON:0003281,2.59e-12,3;UBERON:0009664,2.59e-12,3;UBERON:0002296,2.59e-12,3;UBERON:0005602,2.59e-12,3;UBERON:0001179,2.59e-12,3;UBERON:0006293,2.59e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,2.13461532569859,1.25937250101887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.515663103788617,1.79894080664872,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.258355639344024,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,2.56454793842586 | |||
|short_description=p@chr11:120484784..120484795,+ | |||
}} |
Revision as of 16:13, 10 September 2013
Short description: | p@chr11:120484784..120484795, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:120484784..120484795, + |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.63e-22 | 24 |
pro-B cell | 1.63e-22 | 24 |
lymphoid lineage restricted progenitor cell | 2.52e-16 | 52 |
lymphocyte | 5.00e-16 | 53 |
common lymphoid progenitor | 5.00e-16 | 53 |
nongranular leukocyte | 1.48e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.95e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.59e-12 | 3 |
gastrointestinal system mesentery | 2.59e-12 | 3 |
stomach region | 2.59e-12 | 3 |
mesentery | 2.59e-12 | 3 |
gastrointestinal system serosa | 2.59e-12 | 3 |
mesentery of stomach | 2.59e-12 | 3 |
gut mesentery | 2.59e-12 | 3 |
dorsal mesentery | 2.59e-12 | 3 |
dorsal mesogastrium | 2.59e-12 | 3 |
peritoneal cavity | 2.59e-12 | 3 |
spleen primordium | 2.59e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.84e-34 | 1 |
monogenic disease | 1.84e-34 | 1 |
xeroderma pigmentosum | 1.84e-34 | 1 |
non-Hodgkin lymphoma | 3.61e-34 | 1 |
cutaneous T cell lymphoma | 3.61e-34 | 1 |
mycosis fungoides | 3.61e-34 | 1 |
lymphoma | 3.25e-14 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.