FFCP PHASE1:Hg19::chr11:1213461..1213476,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=371bp_to_uc001lsz.2_5end|coexpression_cluster_id=C238|description=CAGE_peak_1_at_uc001lsz.2_5end|id=chr11:1213461..1213476,+|ontology_enrichment_celltype=CL:0002379!2.23e-07!1|ontology_enrichment_celltype_v019=CL:0002379;1.75e-12;1|ontology_enrichment_celltype_v019_2=CL:0002379,1.57e-12,1|ontology_enrichment_development_v019=UBERON:0006242;1.75e-12;1!UBERON:0009497;3.99e-08;13|ontology_enrichment_disease=DOID:4929!1.81e-12!2;DOID:299!7.40e-08!25;DOID:305!7.76e-08!106;DOID:3111!1.98e-07!1;DOID:3603!1.98e-07!1;DOID:3620!2.23e-07!1;DOID:3565!2.23e-07!1|ontology_enrichment_disease_v019=DOID:3111;1.32e-12;1!DOID:3603;1.32e-12;1!DOID:3620;1.75e-12;1!DOID:3565;1.75e-12;1!DOID:4929;8.52e-07;2!DOID:3493;8.52e-07;2|ontology_enrichment_disease_v019_2=DOID:3111,1.25e-12,1;DOID:3603,1.25e-12,1;DOID:3620,1.57e-12,1;DOID:3565,1.57e-12,1;DOID:3493,8.06e-07,2;DOID:4929,8.52e-07,2|ontology_enrichment_uberon=UBERON:0002114!1.20e-15!12;UBERON:0002394!7.61e-14!4;UBERON:0003928!7.61e-14!4;UBERON:0002294!1.02e-13!7;UBERON:0001173!1.02e-13!7;UBERON:0004912!1.02e-13!7;UBERON:0002108!1.73e-13!14;UBERON:0001264!2.35e-09!10;UBERON:0003922!2.35e-09!10;UBERON:0003923!2.35e-09!10;UBERON:0003924!2.35e-09!10;UBERON:0003921!2.35e-09!10;UBERON:0001007!2.41e-09!155;UBERON:0001555!2.41e-09!155;UBERON:0007026!2.41e-09!155;UBERON:0004921!2.73e-09!129;UBERON:0004185!2.73e-09!129;UBERON:0000077!2.90e-09!130;UBERON:0005409!3.15e-09!35;UBERON:0001041!9.74e-09!98;UBERON:0001045!1.63e-08!11;UBERON:0004119!2.99e-08!169;UBERON:0000925!2.99e-08!169;UBERON:0006595!2.99e-08!169;UBERON:0002075!7.77e-08!18;UBERON:0002171!2.10e-07!1;UBERON:0006518!2.10e-07!1;UBERON:0008949!2.10e-07!1;UBERON:0000101!2.10e-07!1;UBERON:0002167!2.10e-07!1;UBERON:0004913!2.84e-07!1;UBERON:0003703!2.84e-07!1;UBERON:0001174!2.84e-07!1;UBERON:0004914!2.84e-07!1;UBERON:0000160!5.87e-07!27;UBERON:0002336!8.67e-07!1;UBERON:0001018!8.67e-07!1;UBERON:0002473!8.67e-07!1;UBERON:0005340!8.67e-07!1;UBERON:0002316!8.67e-07!1;UBERON:0003544!8.67e-07!1;UBERON:0001020!8.67e-07!1;UBERON:0005970!8.67e-07!1;UBERON:0002437!8.67e-07!1|ontology_enrichment_uberon_v019=UBERON:0002294;3.74e-25;7!UBERON:0001173;3.74e-25;7!UBERON:0002394;5.84e-25;4!UBERON:0003928;5.84e-25;4!UBERON:0002114;6.26e-16;2!UBERON:0002171;1.32e-12;1!UBERON:0006518;1.32e-12;1!UBERON:0008949;1.32e-12;1!UBERON:0000101;1.32e-12;1!UBERON:0002167;1.32e-12;1!UBERON:0004913;2.46e-12;1!UBERON:0003703;2.46e-12;1!UBERON:0001174;2.46e-12;1!UBERON:0004914;2.46e-12;1!UBERON:0000058;2.31e-10;10!UBERON:0002108;6.22e-10;4!UBERON:0002423;3.19e-07;25!UBERON:0003127;5.73e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002294,1.15e-19,9;UBERON:0001173,1.15e-19,9;UBERON:0004912,1.15e-19,9;UBERON:0002394,6.42e-17,6;UBERON:0003928,6.42e-17,6;UBERON:0002114,6.26e-16,2;UBERON:0002171,1.40e-12,1;UBERON:0006518,1.40e-12,1;UBERON:0008949,1.40e-12,1;UBERON:0000101,1.40e-12,1;UBERON:0002167,1.40e-12,1;UBERON:0004913,2.46e-12,1;UBERON:0003703,2.46e-12,1;UBERON:0001174,2.46e-12,1;UBERON:0004914,2.46e-12,1;UBERON:0002108,6.22e-10,4;UBERON:0009497,3.14e-07,25;UBERON:0000015,3.14e-07,25;UBERON:0002423,3.14e-07,25;UBERON:0006235,3.14e-07,25;UBERON:0004161,3.14e-07,25;UBERON:0003127,5.73e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.366277859273374,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0,1.79736702294654,1.43216939740487,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,9.67925728389311,0,0,0,0,3.32326936353593,0,0.313932918407225,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,3.20179492109029,0,0.864542502924636,0,0,8.49923308130083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=371bp_to_uc001lsz.2_5end | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_1_at_uc001lsz.2_5end | |||
|id=chr11:1213461..1213476,+ | |||
|ontology_enrichment_celltype=CL:0002379!2.23e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002379;1.75e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.57e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.75e-12;1!UBERON:0009497;3.99e-08;13 | |||
|ontology_enrichment_disease=DOID:4929!1.81e-12!2;DOID:299!7.40e-08!25;DOID:305!7.76e-08!106;DOID:3111!1.98e-07!1;DOID:3603!1.98e-07!1;DOID:3620!2.23e-07!1;DOID:3565!2.23e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.32e-12;1!DOID:3603;1.32e-12;1!DOID:3620;1.75e-12;1!DOID:3565;1.75e-12;1!DOID:4929;8.52e-07;2!DOID:3493;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.25e-12,1;DOID:3603,1.25e-12,1;DOID:3620,1.57e-12,1;DOID:3565,1.57e-12,1;DOID:3493,8.06e-07,2;DOID:4929,8.52e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002114!1.20e-15!12;UBERON:0002394!7.61e-14!4;UBERON:0003928!7.61e-14!4;UBERON:0002294!1.02e-13!7;UBERON:0001173!1.02e-13!7;UBERON:0004912!1.02e-13!7;UBERON:0002108!1.73e-13!14;UBERON:0001264!2.35e-09!10;UBERON:0003922!2.35e-09!10;UBERON:0003923!2.35e-09!10;UBERON:0003924!2.35e-09!10;UBERON:0003921!2.35e-09!10;UBERON:0001007!2.41e-09!155;UBERON:0001555!2.41e-09!155;UBERON:0007026!2.41e-09!155;UBERON:0004921!2.73e-09!129;UBERON:0004185!2.73e-09!129;UBERON:0000077!2.90e-09!130;UBERON:0005409!3.15e-09!35;UBERON:0001041!9.74e-09!98;UBERON:0001045!1.63e-08!11;UBERON:0004119!2.99e-08!169;UBERON:0000925!2.99e-08!169;UBERON:0006595!2.99e-08!169;UBERON:0002075!7.77e-08!18;UBERON:0002171!2.10e-07!1;UBERON:0006518!2.10e-07!1;UBERON:0008949!2.10e-07!1;UBERON:0000101!2.10e-07!1;UBERON:0002167!2.10e-07!1;UBERON:0004913!2.84e-07!1;UBERON:0003703!2.84e-07!1;UBERON:0001174!2.84e-07!1;UBERON:0004914!2.84e-07!1;UBERON:0000160!5.87e-07!27;UBERON:0002336!8.67e-07!1;UBERON:0001018!8.67e-07!1;UBERON:0002473!8.67e-07!1;UBERON:0005340!8.67e-07!1;UBERON:0002316!8.67e-07!1;UBERON:0003544!8.67e-07!1;UBERON:0001020!8.67e-07!1;UBERON:0005970!8.67e-07!1;UBERON:0002437!8.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;3.74e-25;7!UBERON:0001173;3.74e-25;7!UBERON:0002394;5.84e-25;4!UBERON:0003928;5.84e-25;4!UBERON:0002114;6.26e-16;2!UBERON:0002171;1.32e-12;1!UBERON:0006518;1.32e-12;1!UBERON:0008949;1.32e-12;1!UBERON:0000101;1.32e-12;1!UBERON:0002167;1.32e-12;1!UBERON:0004913;2.46e-12;1!UBERON:0003703;2.46e-12;1!UBERON:0001174;2.46e-12;1!UBERON:0004914;2.46e-12;1!UBERON:0000058;2.31e-10;10!UBERON:0002108;6.22e-10;4!UBERON:0002423;3.19e-07;25!UBERON:0003127;5.73e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,1.15e-19,9;UBERON:0001173,1.15e-19,9;UBERON:0004912,1.15e-19,9;UBERON:0002394,6.42e-17,6;UBERON:0003928,6.42e-17,6;UBERON:0002114,6.26e-16,2;UBERON:0002171,1.40e-12,1;UBERON:0006518,1.40e-12,1;UBERON:0008949,1.40e-12,1;UBERON:0000101,1.40e-12,1;UBERON:0002167,1.40e-12,1;UBERON:0004913,2.46e-12,1;UBERON:0003703,2.46e-12,1;UBERON:0001174,2.46e-12,1;UBERON:0004914,2.46e-12,1;UBERON:0002108,6.22e-10,4;UBERON:0009497,3.14e-07,25;UBERON:0000015,3.14e-07,25;UBERON:0002423,3.14e-07,25;UBERON:0006235,3.14e-07,25;UBERON:0004161,3.14e-07,25;UBERON:0003127,5.73e-07,2 | |||
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|short_description=p1@uc001lsz.2 | |||
}} |
Revision as of 16:15, 10 September 2013
Short description: | p1@uc001lsz.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc001lsz.2_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 371bp_to_uc001lsz.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.57e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
biliary system | 1.15e-19 | 9 |
biliary tree | 1.15e-19 | 9 |
biliary bud | 1.15e-19 | 9 |
bile duct | 6.42e-17 | 6 |
digestive system duct | 6.42e-17 | 6 |
duodenum | 6.26e-16 | 2 |
lower lobe of right lung | 1.40e-12 | 1 |
right lung lobe | 1.40e-12 | 1 |
lower lobe of lung | 1.40e-12 | 1 |
lobe of lung | 1.40e-12 | 1 |
right lung | 1.40e-12 | 1 |
hepatopancreatic ampulla | 2.46e-12 | 1 |
extrahepatic bile duct | 2.46e-12 | 1 |
common bile duct | 2.46e-12 | 1 |
duodenal papilla | 2.46e-12 | 1 |
small intestine | 6.22e-10 | 4 |
epithelium of foregut-midgut junction | 3.14e-07 | 25 |
anatomical boundary | 3.14e-07 | 25 |
hepatobiliary system | 3.14e-07 | 25 |
foregut-midgut junction | 3.14e-07 | 25 |
septum transversum | 3.14e-07 | 25 |
open tracheal system trachea | 5.73e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.25e-12 | 1 |
mucinous cystadenocarcinoma | 1.25e-12 | 1 |
central nervous system cancer | 1.57e-12 | 1 |
meningioma | 1.57e-12 | 1 |
signet ring cell adenocarcinoma | 8.06e-07 | 2 |
tubular adenocarcinoma | 8.52e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.