FFCP PHASE1:Hg19::chr11:129991518..129991549,+: Difference between revisions
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{{FFCP | 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186973305,3.02799419604189,2.84090487105608,1.26698501011437,1.73381010561369,0.534434810531121,0.918948995348449,2.75778293221613,0.454672189309436,4.28742608249886,7.46252495512901,1.65492793379032,1.0661699095049,9.76064169001335,0,0.124149428591716,4.93380195354699,1.65482611523229,11.7227969595767,0.435433495793923,1.71116650542641,0.202056159043763,0.573777643141411,3.65926392200615,0.325613074443898,0.960546112899439,9.653614114347,8.26391859380599,2.34640942403454,1.22241444182866,1.62758471326295,0,1.40891655513718,0|short_description=p3@APLP2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=334 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=598 | |||
|TSSclassifier=S | |||
|UniProt=Q06481 | |||
|association_with_transcript=-125bp_to_L23113_5end | |||
|coexpression_cluster_id=C880 | |||
|description=CAGE_peak_3_at_APLP2_5end | |||
|id=chr11:129991518..129991549,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.09e-15!42;CL:0002194!1.25e-13!63;CL:0000576!1.25e-13!63;CL:0000040!1.25e-13!63;CL:0000559!1.25e-13!63;CL:0000860!1.52e-13!45;CL:0002009!3.41e-12!65;CL:0000839!8.07e-10!70;CL:0000766!2.02e-09!76;CL:0000557!1.44e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-18;33!CL:0002057;1.08e-18;33!CL:0000473;2.18e-17;39!CL:0000234;2.18e-17;39!CL:0000576;1.02e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.65e-17,48;CL:0000234,3.65e-17,48;CL:0000860,8.41e-15,42;CL:0002057,8.41e-15,42;CL:0002194,1.02e-14,59;CL:0000576,1.02e-14,59;CL:0000040,1.02e-14,59;CL:0000559,1.02e-14,59;CL:0002009,1.98e-13,61;CL:0000839,6.01e-11,66;CL:0000766,7.08e-11,72;CL:0000557,3.63e-10,67 | |||
|ontology_enrichment_development_v019=CL:0002057;2.18e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.44e-11!659;UBERON:0000467!8.05e-11!625;UBERON:0000480!1.01e-10!626;UBERON:0000062!2.00e-10!511;UBERON:0000922!9.90e-09!612;UBERON:0002050!4.04e-08!605;UBERON:0005423!4.04e-08!605;UBERON:0000923!4.71e-08!604;UBERON:0005291!4.71e-08!604;UBERON:0006598!4.71e-08!604;UBERON:0002532!4.71e-08!604;UBERON:0002371!7.96e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.18e-08,76;UBERON:0001434,3.33e-07,100;UBERON:0004765,3.57e-07,90;UBERON:0001474,4.81e-07,82 | |||
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| |||
|short_description=p3@APLP2 | |||
}} | |||
Revision as of 16:39, 10 September 2013
| Short description: | p3@APLP2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_APLP2_5end |
| Coexpression cluster: | C880_CD14_Monocytederived_pineal_Neutrophils_leiomyoma_Hepatocyte_papillary |
| Association with transcript: | -125bp_to_L23113_5end |
| EntrezGene: | APLP2 |
| HGNC: | 598 |
| UniProt: | Q06481 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 3.65e-17 | 48 |
| phagocyte | 3.65e-17 | 48 |
| classical monocyte | 8.41e-15 | 42 |
| CD14-positive, CD16-negative classical monocyte | 8.41e-15 | 42 |
| monopoietic cell | 1.02e-14 | 59 |
| monocyte | 1.02e-14 | 59 |
| monoblast | 1.02e-14 | 59 |
| promonocyte | 1.02e-14 | 59 |
| macrophage dendritic cell progenitor | 1.98e-13 | 61 |
| myeloid lineage restricted progenitor cell | 6.01e-11 | 66 |
| myeloid leukocyte | 7.08e-11 | 72 |
| granulocyte monocyte progenitor cell | 3.63e-10 | 67 |
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 1.18e-08 | 76 |
| skeletal system | 3.33e-07 | 100 |
| skeletal element | 3.57e-07 | 90 |
| bone element | 4.81e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
