FFCP PHASE1:Hg19::chr11:1890056..1890067,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4046|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6707|TSSclassifier=S|UniProt=E9PBV6,P33241|association_with_transcript=153bp_to_ENST00000405957,NM_001013253,uc001luk.2_5end|coexpression_cluster_id=C2118|description=CAGE_peak_12_at_LSP1_5end|id=chr11:1890056..1890067,+|ontology_enrichment_celltype=CL:0000188!3.64e-12!9;CL:0000153!1.08e-09!9;CL:0000447!1.08e-09!9;CL:0000667!5.13e-08!6;CL:0000058!5.13e-08!6;CL:0000138!5.13e-08!6;CL:0000327!2.01e-07!14;CL:0000515!3.95e-07!4;CL:0000135!4.91e-07!3;CL:0000386!4.91e-07!3;CL:0000388!4.91e-07!3|ontology_enrichment_celltype_v019=CL:0000138;1.45e-15;6!CL:0000153;1.01e-14;9!CL:0000447;1.01e-14;9!CL:0000135;4.88e-13;3!CL:0000388;4.88e-13;3!CL:0000499;8.38e-12;28!CL:0000327;2.30e-11;15|ontology_enrichment_celltype_v019_2=CL:0000058,1.47e-15,6;CL:0000138,1.47e-15,6;CL:0000153,1.01e-14,9;CL:0000447,1.01e-14,9;CL:0000135,4.90e-13,3;CL:0000388,4.90e-13,3;CL:0000499,8.19e-12,28;CL:0000327,2.23e-11,15|ontology_enrichment_development_v019=UBERON:0005062;2.50e-09;4!UBERON:0007284;2.50e-09;4!UBERON:0006603;3.29e-09;65!UBERON:0006965;4.99e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.96e-28!115;UBERON:0000043!4.91e-07!3|ontology_enrichment_uberon_v019=UBERON:0007846;4.88e-13;3!UBERON:0000043;4.88e-13;3!UBERON:0007845;4.88e-13;3!UBERON:0003978;2.67e-12;3!UBERON:0000946;2.67e-12;3!UBERON:0002133;1.52e-08;2!UBERON:0000341;1.70e-08;2!UBERON:0002081;6.50e-08;2!UBERON:0001134;1.58e-07;16!UBERON:0002036;1.58e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.90e-13,3;UBERON:0000043,4.90e-13,3;UBERON:0007845,4.90e-13,3;UBERON:0007023,5.89e-13,114;UBERON:0003978,2.67e-12,3;UBERON:0009751,2.67e-12,3;UBERON:0000946,2.67e-12,3;UBERON:0002523,2.67e-12,3;UBERON:0005983,2.67e-12,3;UBERON:0002165,2.67e-12,3;UBERON:0002062,2.67e-12,3;UBERON:0007280,2.67e-12,3;UBERON:0002133,1.55e-08,2;UBERON:0000341,1.73e-08,2;UBERON:0002081,6.75e-08,2;UBERON:0010227,6.75e-08,2|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,1.56711376919903,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,3.00802746381534,2.02785126545153,3.9764297352555,3.40644409211845,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.13932408087165,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.579125226670317,0.821905290201534,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,2.27407504055985,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,0.580024309752732,0.154048617114644,0.460511024178389,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,1.06838442776085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2776908824416,0.987884678879706,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,5.18044769452781,2.21027132424918,0,0,0,0,0,0,0,4.14302303675121,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54006525172403,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0.202203398942031,4.81546588379273,0,0,0,0,0.394584402849391,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,2.32773639572207,0,3.61569185248852,0,0,0,0,0,3.84215390530835,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14421282798959,6.87481272035051,1.43574604915363,0.798716001995964,0.429226048136571,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,1.63205341010842,0.5013797880454,0.612691153526923,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40016658797892,1.71697852591396,1.34699795506368,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4046 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6707 | |||
|TSSclassifier=S | |||
|UniProt=E9PBV6,P33241 | |||
|association_with_transcript=153bp_to_ENST00000405957,NM_001013253,uc001luk.2_5end | |||
|coexpression_cluster_id=C2118 | |||
|description=CAGE_peak_12_at_LSP1_5end | |||
|id=chr11:1890056..1890067,+ | |||
|ontology_enrichment_celltype=CL:0000188!3.64e-12!9;CL:0000153!1.08e-09!9;CL:0000447!1.08e-09!9;CL:0000667!5.13e-08!6;CL:0000058!5.13e-08!6;CL:0000138!5.13e-08!6;CL:0000327!2.01e-07!14;CL:0000515!3.95e-07!4;CL:0000135!4.91e-07!3;CL:0000386!4.91e-07!3;CL:0000388!4.91e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.45e-15;6!CL:0000153;1.01e-14;9!CL:0000447;1.01e-14;9!CL:0000135;4.88e-13;3!CL:0000388;4.88e-13;3!CL:0000499;8.38e-12;28!CL:0000327;2.30e-11;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.47e-15,6;CL:0000138,1.47e-15,6;CL:0000153,1.01e-14,9;CL:0000447,1.01e-14,9;CL:0000135,4.90e-13,3;CL:0000388,4.90e-13,3;CL:0000499,8.19e-12,28;CL:0000327,2.23e-11,15 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.50e-09;4!UBERON:0007284;2.50e-09;4!UBERON:0006603;3.29e-09;65!UBERON:0006965;4.99e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.96e-28!115;UBERON:0000043!4.91e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.88e-13;3!UBERON:0000043;4.88e-13;3!UBERON:0007845;4.88e-13;3!UBERON:0003978;2.67e-12;3!UBERON:0000946;2.67e-12;3!UBERON:0002133;1.52e-08;2!UBERON:0000341;1.70e-08;2!UBERON:0002081;6.50e-08;2!UBERON:0001134;1.58e-07;16!UBERON:0002036;1.58e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.90e-13,3;UBERON:0000043,4.90e-13,3;UBERON:0007845,4.90e-13,3;UBERON:0007023,5.89e-13,114;UBERON:0003978,2.67e-12,3;UBERON:0009751,2.67e-12,3;UBERON:0000946,2.67e-12,3;UBERON:0002523,2.67e-12,3;UBERON:0005983,2.67e-12,3;UBERON:0002165,2.67e-12,3;UBERON:0002062,2.67e-12,3;UBERON:0007280,2.67e-12,3;UBERON:0002133,1.55e-08,2;UBERON:0000341,1.73e-08,2;UBERON:0002081,6.75e-08,2;UBERON:0010227,6.75e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,1.56711376919903,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,3.00802746381534,2.02785126545153,3.9764297352555,3.40644409211845,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.13932408087165,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.579125226670317,0.821905290201534,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,2.27407504055985,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,0.580024309752732,0.154048617114644,0.460511024178389,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,1.06838442776085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2776908824416,0.987884678879706,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,5.18044769452781,2.21027132424918,0,0,0,0,0,0,0,4.14302303675121,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54006525172403,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0.202203398942031,4.81546588379273,0,0,0,0,0.394584402849391,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,2.32773639572207,0,3.61569185248852,0,0,0,0,0,3.84215390530835,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14421282798959,6.87481272035051,1.43574604915363,0.798716001995964,0.429226048136571,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0,0,1.63205341010842,0.5013797880454,0.612691153526923,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40016658797892,1.71697852591396,1.34699795506368,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,4.96211178389294,0,0,0,0,0,0,0.0887023701626388,0,0.857440047187092,0.0679697329768317,0,0,0,2.11931350696388,0,0,0,0,0,7.00470132931232,0,0,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,0,1.95059333026869,2.3196288626764,0,0,0,0,0,0,0,0.231522474323834,0,0,3.18692818280077,0,0.196308467114945,0.297046400327086,0,0,2.44358186747619,0,0,0,0,0,2.92134555298607,1.83491713361816,0,0,0.0679914901909147,0,0,5.20793025433452,8.78133694399695,9.95041092884715,0,0,0,0,0,0,0,1.21245917149183,0.803892390468535,0,0,5.33084954752452,1.42838658878244,0.0645889098360061,0,0,0.445530107947154,0.808468755832877,3.9189014621453,2.39563310759697,0.5388164241167,0.430333232356058,1.99596213927608,0,0,0,0,2.34640942403454,1.4668973301944,0,1.33151354837103,4.02547587182052,0 | |||
|short_description=p12@LSP1 | |||
}} |
Revision as of 17:04, 10 September 2013
Short description: | p12@LSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_LSP1_5end |
Coexpression cluster: | C2118_Mesenchymal_Chondrocyte_tenocyte_retina_Synoviocyte_heart_spleen |
Association with transcript: | 153bp_to_ENST00000405957, NM_001013253, uc001luk.2_5end |
EntrezGene: | LSP1 |
HGNC: | 6707 |
UniProt: | E9PBV6P33241 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.47e-15 | 6 |
chondrocyte | 1.47e-15 | 6 |
GAG secreting cell | 1.01e-14 | 9 |
carbohydrate secreting cell | 1.01e-14 | 9 |
fibrocyte | 4.90e-13 | 3 |
tendon cell | 4.90e-13 | 3 |
stromal cell | 8.19e-12 | 28 |
extracellular matrix secreting cell | 2.23e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.90e-13 | 3 |
tendon | 4.90e-13 | 3 |
regular connective tissue | 4.90e-13 | 3 |
adult organism | 5.89e-13 | 114 |
valve | 2.67e-12 | 3 |
cardiac mesenchyme | 2.67e-12 | 3 |
cardial valve | 2.67e-12 | 3 |
tunica intima | 2.67e-12 | 3 |
heart layer | 2.67e-12 | 3 |
endocardium | 2.67e-12 | 3 |
endocardial cushion | 2.67e-12 | 3 |
presumptive endocardium | 2.67e-12 | 3 |
atrioventricular valve | 1.55e-08 | 2 |
throat | 1.73e-08 | 2 |
cardiac atrium | 6.75e-08 | 2 |
future cardiac atrium | 6.75e-08 | 2 |
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