FFCP PHASE1:Hg19::chr11:22688150..22688192,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2620|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4167|TSSclassifier=S|UniProt=O43903|association_with_transcript=0bp_to_ENST00000454584,NM_001143830,uc009yie.2_5end|coexpression_cluster_id=C153|description=CAGE_peak_2_at_GAS2_5end|id=chr11:22688150..22688192,+|ontology_enrichment_celltype=CL:0000188!1.75e-07!9;CL:0000181!5.45e-07!12;CL:0000417!5.45e-07!12;CL:0000668!5.45e-07!12;CL:0000414!5.45e-07!12;CL:0000412!5.45e-07!12;CL:0000182!5.45e-07!12|ontology_enrichment_celltype_v019=CL:0000182;1.94e-15;12!CL:0002549;1.30e-08;2|ontology_enrichment_celltype_v019_2=CL:0000182,1.43e-15,12;CL:0002549,1.46e-08,2|ontology_enrichment_development_v019=UBERON:0003104;4.66e-17;31!UBERON:0004161;1.87e-12;11!UBERON:0009497;1.96e-10;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.55e-27!115;UBERON:0000073!4.60e-15!94;UBERON:0001016!4.60e-15!94;UBERON:0002616!2.42e-14!59;UBERON:0003075!2.50e-14!86;UBERON:0007284!2.50e-14!86;UBERON:0002346!4.40e-14!90;UBERON:0000483!4.40e-14!309;UBERON:0000481!4.43e-14!347;UBERON:0000475!4.86e-14!365;UBERON:0001017!7.86e-14!82;UBERON:0001049!8.23e-14!57;UBERON:0005068!8.23e-14!57;UBERON:0006241!8.23e-14!57;UBERON:0007135!8.23e-14!57;UBERON:0000119!1.07e-13!312;UBERON:0004121!1.32e-13!169;UBERON:0000924!1.38e-13!173;UBERON:0006601!1.38e-13!173;UBERON:0005743!2.14e-13!86;UBERON:0000153!7.43e-13!129;UBERON:0007811!7.43e-13!129;UBERON:0000955!2.22e-12!69;UBERON:0006238!2.22e-12!69;UBERON:0002780!2.24e-12!41;UBERON:0001890!2.24e-12!41;UBERON:0006240!2.24e-12!41;UBERON:0003080!6.48e-12!42;UBERON:0002020!2.93e-11!34;UBERON:0003528!2.93e-11!34;UBERON:0000033!7.19e-11!123;UBERON:0001893!1.01e-10!34;UBERON:0003056!1.38e-10!61;UBERON:0002791!3.40e-10!33;UBERON:0001950!4.25e-10!20;UBERON:0002619!4.28e-10!22;UBERON:0001869!2.07e-09!32;UBERON:0000477!3.54e-09!286;UBERON:0000956!1.98e-08!25;UBERON:0000203!1.98e-08!25;UBERON:0000025!2.64e-08!194;UBERON:0001871!2.64e-08!7;UBERON:0004111!8.79e-08!241;UBERON:0000922!2.18e-07!612;UBERON:0005057!9.53e-07!26|ontology_enrichment_uberon_v019=UBERON:0002107;3.25e-12;19!UBERON:0006925;3.25e-12;19!UBERON:0002423;3.22e-11;25!UBERON:0002368;1.78e-09;33!UBERON:0005090;9.00e-09;2!UBERON:0001630;9.00e-09;2!UBERON:0000341;1.01e-08;2!UBERON:0005629;1.30e-08;2!UBERON:0005358;1.30e-08;2!UBERON:0001886;1.30e-08;2!UBERON:0004086;1.30e-08;2!UBERON:0005282;1.30e-08;2!UBERON:0005281;1.30e-08;2!UBERON:0002365;1.73e-08;31!UBERON:0002330;1.73e-08;31!UBERON:0000949;8.70e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.61e-12,19;UBERON:0006925,2.61e-12,19;UBERON:0008836,2.61e-12,19;UBERON:0009497,2.86e-11,25;UBERON:0000015,2.86e-11,25;UBERON:0002423,2.86e-11,25;UBERON:0006235,2.86e-11,25;UBERON:0004161,2.86e-11,25;UBERON:0008835,1.92e-10,22;UBERON:0003894,1.92e-10,22;UBERON:0009854,6.28e-10,23;UBERON:0002368,1.63e-09,35;UBERON:0005172,2.56e-09,54;UBERON:0005173,2.56e-09,54;UBERON:0007499,5.03e-09,25;UBERON:0005090,5.31e-09,2;UBERON:0001630,5.31e-09,2;UBERON:0002365,7.94e-09,31;UBERON:0002330,7.94e-09,31;UBERON:0009856,1.26e-08,26;UBERON:0005629,1.46e-08,2;UBERON:0005358,1.46e-08,2;UBERON:0001886,1.46e-08,2;UBERON:0004086,1.46e-08,2;UBERON:0005282,1.46e-08,2;UBERON:0005281,1.46e-08,2;UBERON:0000949,1.48e-08,45;UBERON:0000341,1.58e-08,2;UBERON:0005177,2.68e-08,101;UBERON:0002417,4.12e-08,60;UBERON:0000916,4.12e-08,60;UBERON:0001041,8.39e-08,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0,0,5.73100543109634,5.25443772479653,5.11620078538915,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,1.36221684880438,2.30470369792,0.468642863667593,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,2.94848165003288,2.36315962672562,0,0.368965315629341,0,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.514137463516618,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,1.2269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0.386682873168488,0.154048617114644,0.15350367472613,0.137836572484531,0.859361958946189,2.0302337147992,0.0852266274161009,0.801288320820636,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2620 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4167 | |||
|TSSclassifier=S | |||
|UniProt=O43903 | |||
|association_with_transcript=0bp_to_ENST00000454584,NM_001143830,uc009yie.2_5end | |||
|coexpression_cluster_id=C153 | |||
|description=CAGE_peak_2_at_GAS2_5end | |||
|id=chr11:22688150..22688192,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.75e-07!9;CL:0000181!5.45e-07!12;CL:0000417!5.45e-07!12;CL:0000668!5.45e-07!12;CL:0000414!5.45e-07!12;CL:0000412!5.45e-07!12;CL:0000182!5.45e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.94e-15;12!CL:0002549;1.30e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.43e-15,12;CL:0002549,1.46e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.66e-17;31!UBERON:0004161;1.87e-12;11!UBERON:0009497;1.96e-10;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-27!115;UBERON:0000073!4.60e-15!94;UBERON:0001016!4.60e-15!94;UBERON:0002616!2.42e-14!59;UBERON:0003075!2.50e-14!86;UBERON:0007284!2.50e-14!86;UBERON:0002346!4.40e-14!90;UBERON:0000483!4.40e-14!309;UBERON:0000481!4.43e-14!347;UBERON:0000475!4.86e-14!365;UBERON:0001017!7.86e-14!82;UBERON:0001049!8.23e-14!57;UBERON:0005068!8.23e-14!57;UBERON:0006241!8.23e-14!57;UBERON:0007135!8.23e-14!57;UBERON:0000119!1.07e-13!312;UBERON:0004121!1.32e-13!169;UBERON:0000924!1.38e-13!173;UBERON:0006601!1.38e-13!173;UBERON:0005743!2.14e-13!86;UBERON:0000153!7.43e-13!129;UBERON:0007811!7.43e-13!129;UBERON:0000955!2.22e-12!69;UBERON:0006238!2.22e-12!69;UBERON:0002780!2.24e-12!41;UBERON:0001890!2.24e-12!41;UBERON:0006240!2.24e-12!41;UBERON:0003080!6.48e-12!42;UBERON:0002020!2.93e-11!34;UBERON:0003528!2.93e-11!34;UBERON:0000033!7.19e-11!123;UBERON:0001893!1.01e-10!34;UBERON:0003056!1.38e-10!61;UBERON:0002791!3.40e-10!33;UBERON:0001950!4.25e-10!20;UBERON:0002619!4.28e-10!22;UBERON:0001869!2.07e-09!32;UBERON:0000477!3.54e-09!286;UBERON:0000956!1.98e-08!25;UBERON:0000203!1.98e-08!25;UBERON:0000025!2.64e-08!194;UBERON:0001871!2.64e-08!7;UBERON:0004111!8.79e-08!241;UBERON:0000922!2.18e-07!612;UBERON:0005057!9.53e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.25e-12;19!UBERON:0006925;3.25e-12;19!UBERON:0002423;3.22e-11;25!UBERON:0002368;1.78e-09;33!UBERON:0005090;9.00e-09;2!UBERON:0001630;9.00e-09;2!UBERON:0000341;1.01e-08;2!UBERON:0005629;1.30e-08;2!UBERON:0005358;1.30e-08;2!UBERON:0001886;1.30e-08;2!UBERON:0004086;1.30e-08;2!UBERON:0005282;1.30e-08;2!UBERON:0005281;1.30e-08;2!UBERON:0002365;1.73e-08;31!UBERON:0002330;1.73e-08;31!UBERON:0000949;8.70e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.61e-12,19;UBERON:0006925,2.61e-12,19;UBERON:0008836,2.61e-12,19;UBERON:0009497,2.86e-11,25;UBERON:0000015,2.86e-11,25;UBERON:0002423,2.86e-11,25;UBERON:0006235,2.86e-11,25;UBERON:0004161,2.86e-11,25;UBERON:0008835,1.92e-10,22;UBERON:0003894,1.92e-10,22;UBERON:0009854,6.28e-10,23;UBERON:0002368,1.63e-09,35;UBERON:0005172,2.56e-09,54;UBERON:0005173,2.56e-09,54;UBERON:0007499,5.03e-09,25;UBERON:0005090,5.31e-09,2;UBERON:0001630,5.31e-09,2;UBERON:0002365,7.94e-09,31;UBERON:0002330,7.94e-09,31;UBERON:0009856,1.26e-08,26;UBERON:0005629,1.46e-08,2;UBERON:0005358,1.46e-08,2;UBERON:0001886,1.46e-08,2;UBERON:0004086,1.46e-08,2;UBERON:0005282,1.46e-08,2;UBERON:0005281,1.46e-08,2;UBERON:0000949,1.48e-08,45;UBERON:0000341,1.58e-08,2;UBERON:0005177,2.68e-08,101;UBERON:0002417,4.12e-08,60;UBERON:0000916,4.12e-08,60;UBERON:0001041,8.39e-08,87 | |||
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|short_description=p2@GAS2 | |||
}} |
Revision as of 17:15, 10 September 2013
Short description: | p2@GAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GAS2_5end |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | 0bp_to_ENST00000454584, NM_001143830, uc009yie.2_5end |
EntrezGene: | GAS2 |
HGNC: | 4167 |
UniProt: | O43903 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.43e-15 | 12 |
fibroblast of choroid plexus | 1.46e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 2.61e-12 | 19 |
digestive gland | 2.61e-12 | 19 |
liver bud | 2.61e-12 | 19 |
epithelium of foregut-midgut junction | 2.86e-11 | 25 |
anatomical boundary | 2.86e-11 | 25 |
hepatobiliary system | 2.86e-11 | 25 |
foregut-midgut junction | 2.86e-11 | 25 |
septum transversum | 2.86e-11 | 25 |
hepatic diverticulum | 1.92e-10 | 22 |
liver primordium | 1.92e-10 | 22 |
digestive tract diverticulum | 6.28e-10 | 23 |
endocrine gland | 1.63e-09 | 35 |
abdomen element | 2.56e-09 | 54 |
abdominal segment element | 2.56e-09 | 54 |
epithelial sac | 5.03e-09 | 25 |
muscle structure | 5.31e-09 | 2 |
muscle organ | 5.31e-09 | 2 |
exocrine gland | 7.94e-09 | 31 |
exocrine system | 7.94e-09 | 31 |
sac | 1.26e-08 | 26 |
vascular plexus | 1.46e-08 | 2 |
ventricle of nervous system | 1.46e-08 | 2 |
choroid plexus | 1.46e-08 | 2 |
brain ventricle | 1.46e-08 | 2 |
ventricular system of brain | 1.46e-08 | 2 |
ventricular system of central nervous system | 1.46e-08 | 2 |
endocrine system | 1.48e-08 | 45 |
throat | 1.58e-08 | 2 |
trunk region element | 2.68e-08 | 101 |
abdominal segment of trunk | 4.12e-08 | 60 |
abdomen | 4.12e-08 | 60 |
foregut | 8.39e-08 | 87 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.