FFCP PHASE1:Hg19::chr11:31391345..31391358,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=120526|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26979|TSSclassifier=S|UniProt=Q6P3W2|association_with_transcript=-18bp_to_NM_181706,uc001msw.1,uc001msx.2,uc009yjm.2_5end|coexpression_cluster_id=C185|description=CAGE_peak_3_at_DNAJC24_5end|id=chr11:31391345..31391358,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3119;4.01e-09;14!DOID:3307;5.94e-08;2|ontology_enrichment_disease_v019_2=DOID:3119,4.95e-09,14;DOID:3307,4.38e-08,2|ontology_enrichment_uberon=UBERON:0001049!4.81e-12!57;UBERON:0005068!4.81e-12!57;UBERON:0006241!4.81e-12!57;UBERON:0007135!4.81e-12!57;UBERON:0002780!2.28e-10!41;UBERON:0001890!2.28e-10!41;UBERON:0006240!2.28e-10!41;UBERON:0002616!4.89e-10!59;UBERON:0001893!5.31e-10!34;UBERON:0002020!5.38e-10!34;UBERON:0003528!5.38e-10!34;UBERON:0003080!7.22e-10!42;UBERON:0007023!1.60e-09!115;UBERON:0001017!2.16e-09!82;UBERON:0002791!2.30e-09!33;UBERON:0001869!2.64e-09!32;UBERON:0000955!4.38e-09!69;UBERON:0006238!4.38e-09!69;UBERON:0005743!1.27e-08!86;UBERON:0000073!3.39e-08!94;UBERON:0001016!3.39e-08!94;UBERON:0002346!4.91e-07!90;UBERON:0003075!5.60e-07!86;UBERON:0007284!5.60e-07!86|ontology_enrichment_uberon_v019=UBERON:0001874;1.31e-14;1!UBERON:0000996;1.31e-14;1!UBERON:0001954;5.94e-08;2!UBERON:0003022;5.94e-08;2!UBERON:0002421;5.94e-08;2!UBERON:0002600;5.94e-08;2!UBERON:0000473;1.44e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0000996,5.42e-15,1;UBERON:0001874,1.23e-14,1;UBERON:0001954,5.02e-08,2;UBERON:0003022,5.02e-08,2;UBERON:0002421,5.02e-08,2;UBERON:0002600,5.02e-08,2;UBERON:0000473,1.23e-07,8|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.229240217243854,0.164201178899891,0.157421562627358,0,0.383829398097213,0.154816123316076,0,0,0,0.232401601740905,0.426507697462265,0,0.553995408531877,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0.75374599577023,0.521482918420201,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,1.32171328579026,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0,0.270803863765016,0.128091319725675,0.260118695119756,0,0,0,0.296573126324121,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0.50133791063589,0,0,0,0.283604451492204,0,0,0.589405839739707,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0.71153252537342,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0.515281080091258,0,0,0,0,0.368199594569197,0,0,0,0.169560592310488,0,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0.269662616320329,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0,0,0,0.492663237895943,0.088048434013226,0.829312462163088,0.288239906833923,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0.513372145118994,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0,0.824328093181778,0.0915694648183434,0,0.574265537996172,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0,0,0,0.0852266274161009,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0.842516912477962,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0.426851060090485,0.318852545457645,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0.343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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=120526 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26979 | |||
|TSSclassifier=S | |||
|UniProt=Q6P3W2 | |||
|association_with_transcript=-18bp_to_NM_181706,uc001msw.1,uc001msx.2,uc009yjm.2_5end | |||
|coexpression_cluster_id=C185 | |||
|description=CAGE_peak_3_at_DNAJC24_5end | |||
|id=chr11:31391345..31391358,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;4.01e-09;14!DOID:3307;5.94e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.95e-09,14;DOID:3307,4.38e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.81e-12!57;UBERON:0005068!4.81e-12!57;UBERON:0006241!4.81e-12!57;UBERON:0007135!4.81e-12!57;UBERON:0002780!2.28e-10!41;UBERON:0001890!2.28e-10!41;UBERON:0006240!2.28e-10!41;UBERON:0002616!4.89e-10!59;UBERON:0001893!5.31e-10!34;UBERON:0002020!5.38e-10!34;UBERON:0003528!5.38e-10!34;UBERON:0003080!7.22e-10!42;UBERON:0007023!1.60e-09!115;UBERON:0001017!2.16e-09!82;UBERON:0002791!2.30e-09!33;UBERON:0001869!2.64e-09!32;UBERON:0000955!4.38e-09!69;UBERON:0006238!4.38e-09!69;UBERON:0005743!1.27e-08!86;UBERON:0000073!3.39e-08!94;UBERON:0001016!3.39e-08!94;UBERON:0002346!4.91e-07!90;UBERON:0003075!5.60e-07!86;UBERON:0007284!5.60e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;1.31e-14;1!UBERON:0000996;1.31e-14;1!UBERON:0001954;5.94e-08;2!UBERON:0003022;5.94e-08;2!UBERON:0002421;5.94e-08;2!UBERON:0002600;5.94e-08;2!UBERON:0000473;1.44e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,5.42e-15,1;UBERON:0001874,1.23e-14,1;UBERON:0001954,5.02e-08,2;UBERON:0003022,5.02e-08,2;UBERON:0002421,5.02e-08,2;UBERON:0002600,5.02e-08,2;UBERON:0000473,1.23e-07,8 | |||
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| |||
|short_description=p3@DNAJC24 | |||
}} |
Revision as of 17:25, 10 September 2013
Short description: | p3@DNAJC24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_DNAJC24_5end |
Coexpression cluster: | C185_small_adrenal_gastric_Mesenchymal_acute_HES3GFP_testis |
Association with transcript: | -18bp_to_NM_181706, uc001msw.1, uc001msx.2, uc009yjm.2_5end |
EntrezGene: | DNAJC24 |
HGNC: | 26979 |
UniProt: | Q6P3W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vagina | 5.42e-15 | 1 |
putamen | 1.23e-14 | 1 |
Ammon's horn | 5.02e-08 | 2 |
lobe parts of cerebral cortex | 5.02e-08 | 2 |
hippocampal formation | 5.02e-08 | 2 |
limbic lobe | 5.02e-08 | 2 |
testis | 1.23e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.95e-09 | 14 |
teratoma | 4.38e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.