FFCP PHASE1:Hg19::chr11:66675339..66675357,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5091|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8636|TSSclassifier=S|UniProt=P11498|association_with_transcript=0bp_to_NM_022172,uc001ojn.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_4_at_PC_5end|id=chr11:66675339..66675357,-|ontology_enrichment_celltype=CL:0000136!4.08e-09!15;CL:0000181!2.11e-07!12;CL:0000417!2.11e-07!12;CL:0000668!2.11e-07!12;CL:0000414!2.11e-07!12;CL:0000412!2.11e-07!12;CL:0000182!2.11e-07!12|ontology_enrichment_celltype_v019=CL:0000136;8.54e-28;13!CL:0002549;1.37e-12;2!CL:0000182;1.46e-12;12!CL:0002575;2.47e-12;2!CL:0002521;5.97e-09;3|ontology_enrichment_celltype_v019_2=CL:0000136,5.58e-24,15;CL:0002549,1.08e-12,2;CL:0000182,1.36e-12,12;CL:0002575,3.12e-12,2;CL:0002521,5.40e-09,3|ontology_enrichment_development_v019=UBERON:0004161;5.44e-09;11!UBERON:0009497;1.28e-07;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.02e-26!115;UBERON:0002616!1.09e-24!59;UBERON:0001049!4.40e-22!57;UBERON:0005068!4.40e-22!57;UBERON:0006241!4.40e-22!57;UBERON:0007135!4.40e-22!57;UBERON:0000955!4.89e-22!69;UBERON:0006238!4.89e-22!69;UBERON:0001017!1.05e-20!82;UBERON:0003075!1.21e-20!86;UBERON:0007284!1.21e-20!86;UBERON:0005743!1.27e-20!86;UBERON:0002346!3.22e-19!90;UBERON:0000073!1.28e-17!94;UBERON:0001016!1.28e-17!94;UBERON:0003080!1.38e-15!42;UBERON:0000033!1.86e-15!123;UBERON:0000153!5.58e-15!129;UBERON:0007811!5.58e-15!129;UBERON:0002780!2.42e-14!41;UBERON:0001890!2.42e-14!41;UBERON:0006240!2.42e-14!41;UBERON:0002298!4.43e-14!8;UBERON:0003056!3.31e-13!61;UBERON:0002107!1.98e-12!19;UBERON:0006925!1.98e-12!19;UBERON:0008836!1.98e-12!19;UBERON:0000475!1.48e-11!365;UBERON:0002020!1.49e-11!34;UBERON:0003528!1.49e-11!34;UBERON:0009854!2.45e-11!23;UBERON:0001893!2.58e-11!34;UBERON:0000477!4.09e-11!286;UBERON:0005057!7.48e-11!26;UBERON:0004121!1.68e-10!169;UBERON:0002791!1.79e-10!33;UBERON:0008835!2.77e-10!22;UBERON:0003894!2.77e-10!22;UBERON:0009497!3.07e-10!25;UBERON:0000015!3.07e-10!25;UBERON:0002423!3.07e-10!25;UBERON:0006235!3.07e-10!25;UBERON:0004161!3.07e-10!25;UBERON:0000924!5.53e-10!173;UBERON:0006601!5.53e-10!173;UBERON:0009856!1.28e-09!26;UBERON:0001869!3.22e-09!32;UBERON:0000025!5.42e-09!194;UBERON:0000481!6.87e-09!347;UBERON:0007499!1.15e-08!25;UBERON:0004111!1.28e-08!241;UBERON:0004733!5.03e-08!12;UBERON:0002028!5.03e-08!12;UBERON:0007277!5.03e-08!12;UBERON:0002619!6.66e-08!22;UBERON:0003076!8.66e-08!15;UBERON:0003057!8.66e-08!15;UBERON:0002365!1.50e-07!31;UBERON:0002330!1.50e-07!31;UBERON:0001950!2.25e-07!20;UBERON:0002368!2.65e-07!35;UBERON:0004732!2.73e-07!13;UBERON:0002308!3.81e-07!9;UBERON:0000125!3.81e-07!9|ontology_enrichment_uberon_v019=UBERON:0002107;2.31e-19;19!UBERON:0006925;2.31e-19;19!UBERON:0002423;1.99e-14;25!UBERON:0001897;7.34e-13;2!UBERON:0010225;7.34e-13;2!UBERON:0005629;1.37e-12;2!UBERON:0005358;1.37e-12;2!UBERON:0001886;1.37e-12;2!UBERON:0004086;1.37e-12;2!UBERON:0005282;1.37e-12;2!UBERON:0005281;1.37e-12;2!UBERON:0002365;2.79e-11;31!UBERON:0002330;2.79e-11;31!UBERON:0002368;1.02e-09;33!UBERON:0002190;5.97e-09;3!UBERON:0009663;3.65e-08;7!UBERON:0005172;5.01e-08;52!UBERON:0005173;5.01e-08;52!UBERON:0002038;1.63e-07;1!UBERON:0009661;1.63e-07;1!UBERON:0002950;1.63e-07;1!UBERON:0001891;1.63e-07;1!UBERON:0000949;1.95e-07;43!UBERON:0002784;7.53e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.40e-19,19;UBERON:0006925,2.40e-19,19;UBERON:0008836,2.40e-19,19;UBERON:0008835,1.52e-16,22;UBERON:0003894,1.52e-16,22;UBERON:0009854,8.98e-16,23;UBERON:0007499,2.05e-14,25;UBERON:0009497,2.05e-14,25;UBERON:0000015,2.05e-14,25;UBERON:0002423,2.05e-14,25;UBERON:0006235,2.05e-14,25;UBERON:0004161,2.05e-14,25;UBERON:0009856,8.17e-14,26;UBERON:0001897,8.03e-13,2;UBERON:0010225,8.03e-13,2;UBERON:0005629,1.08e-12,2;UBERON:0005358,1.08e-12,2;UBERON:0001886,1.08e-12,2;UBERON:0004086,1.08e-12,2;UBERON:0005282,1.08e-12,2;UBERON:0005281,1.08e-12,2;UBERON:0002365,2.17e-11,31;UBERON:0002330,2.17e-11,31;UBERON:0002417,3.93e-10,60;UBERON:0000916,3.93e-10,60;UBERON:0002368,5.96e-10,35;UBERON:0005172,1.69e-09,54;UBERON:0005173,1.69e-09,54;UBERON:0002190,5.40e-09,3;UBERON:0009663,3.65e-08,7;UBERON:0002038,1.63e-07,1;UBERON:0009661,1.63e-07,1;UBERON:0002950,1.63e-07,1;UBERON:0001891,1.63e-07,1;UBERON:0009616,1.63e-07,1;UBERON:0010286,1.63e-07,1;UBERON:0000949,1.79e-07,45;UBERON:0002784,7.87e-07,4|phase1_expression=0.181678379270557,1.49870366723688,0,0,1.34088328328186,0,2.53299878168311,0,3.91778442299758,0,0,0,0,0.618831764800233,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,4.06035134042909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8636 | |||
|TSSclassifier=S | |||
|UniProt=P11498 | |||
|association_with_transcript=0bp_to_NM_022172,uc001ojn.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_PC_5end | |||
|id=chr11:66675339..66675357,- | |||
|ontology_enrichment_celltype=CL:0000136!4.08e-09!15;CL:0000181!2.11e-07!12;CL:0000417!2.11e-07!12;CL:0000668!2.11e-07!12;CL:0000414!2.11e-07!12;CL:0000412!2.11e-07!12;CL:0000182!2.11e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.54e-28;13!CL:0002549;1.37e-12;2!CL:0000182;1.46e-12;12!CL:0002575;2.47e-12;2!CL:0002521;5.97e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.58e-24,15;CL:0002549,1.08e-12,2;CL:0000182,1.36e-12,12;CL:0002575,3.12e-12,2;CL:0002521,5.40e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.44e-09;11!UBERON:0009497;1.28e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-26!115;UBERON:0002616!1.09e-24!59;UBERON:0001049!4.40e-22!57;UBERON:0005068!4.40e-22!57;UBERON:0006241!4.40e-22!57;UBERON:0007135!4.40e-22!57;UBERON:0000955!4.89e-22!69;UBERON:0006238!4.89e-22!69;UBERON:0001017!1.05e-20!82;UBERON:0003075!1.21e-20!86;UBERON:0007284!1.21e-20!86;UBERON:0005743!1.27e-20!86;UBERON:0002346!3.22e-19!90;UBERON:0000073!1.28e-17!94;UBERON:0001016!1.28e-17!94;UBERON:0003080!1.38e-15!42;UBERON:0000033!1.86e-15!123;UBERON:0000153!5.58e-15!129;UBERON:0007811!5.58e-15!129;UBERON:0002780!2.42e-14!41;UBERON:0001890!2.42e-14!41;UBERON:0006240!2.42e-14!41;UBERON:0002298!4.43e-14!8;UBERON:0003056!3.31e-13!61;UBERON:0002107!1.98e-12!19;UBERON:0006925!1.98e-12!19;UBERON:0008836!1.98e-12!19;UBERON:0000475!1.48e-11!365;UBERON:0002020!1.49e-11!34;UBERON:0003528!1.49e-11!34;UBERON:0009854!2.45e-11!23;UBERON:0001893!2.58e-11!34;UBERON:0000477!4.09e-11!286;UBERON:0005057!7.48e-11!26;UBERON:0004121!1.68e-10!169;UBERON:0002791!1.79e-10!33;UBERON:0008835!2.77e-10!22;UBERON:0003894!2.77e-10!22;UBERON:0009497!3.07e-10!25;UBERON:0000015!3.07e-10!25;UBERON:0002423!3.07e-10!25;UBERON:0006235!3.07e-10!25;UBERON:0004161!3.07e-10!25;UBERON:0000924!5.53e-10!173;UBERON:0006601!5.53e-10!173;UBERON:0009856!1.28e-09!26;UBERON:0001869!3.22e-09!32;UBERON:0000025!5.42e-09!194;UBERON:0000481!6.87e-09!347;UBERON:0007499!1.15e-08!25;UBERON:0004111!1.28e-08!241;UBERON:0004733!5.03e-08!12;UBERON:0002028!5.03e-08!12;UBERON:0007277!5.03e-08!12;UBERON:0002619!6.66e-08!22;UBERON:0003076!8.66e-08!15;UBERON:0003057!8.66e-08!15;UBERON:0002365!1.50e-07!31;UBERON:0002330!1.50e-07!31;UBERON:0001950!2.25e-07!20;UBERON:0002368!2.65e-07!35;UBERON:0004732!2.73e-07!13;UBERON:0002308!3.81e-07!9;UBERON:0000125!3.81e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.31e-19;19!UBERON:0006925;2.31e-19;19!UBERON:0002423;1.99e-14;25!UBERON:0001897;7.34e-13;2!UBERON:0010225;7.34e-13;2!UBERON:0005629;1.37e-12;2!UBERON:0005358;1.37e-12;2!UBERON:0001886;1.37e-12;2!UBERON:0004086;1.37e-12;2!UBERON:0005282;1.37e-12;2!UBERON:0005281;1.37e-12;2!UBERON:0002365;2.79e-11;31!UBERON:0002330;2.79e-11;31!UBERON:0002368;1.02e-09;33!UBERON:0002190;5.97e-09;3!UBERON:0009663;3.65e-08;7!UBERON:0005172;5.01e-08;52!UBERON:0005173;5.01e-08;52!UBERON:0002038;1.63e-07;1!UBERON:0009661;1.63e-07;1!UBERON:0002950;1.63e-07;1!UBERON:0001891;1.63e-07;1!UBERON:0000949;1.95e-07;43!UBERON:0002784;7.53e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.40e-19,19;UBERON:0006925,2.40e-19,19;UBERON:0008836,2.40e-19,19;UBERON:0008835,1.52e-16,22;UBERON:0003894,1.52e-16,22;UBERON:0009854,8.98e-16,23;UBERON:0007499,2.05e-14,25;UBERON:0009497,2.05e-14,25;UBERON:0000015,2.05e-14,25;UBERON:0002423,2.05e-14,25;UBERON:0006235,2.05e-14,25;UBERON:0004161,2.05e-14,25;UBERON:0009856,8.17e-14,26;UBERON:0001897,8.03e-13,2;UBERON:0010225,8.03e-13,2;UBERON:0005629,1.08e-12,2;UBERON:0005358,1.08e-12,2;UBERON:0001886,1.08e-12,2;UBERON:0004086,1.08e-12,2;UBERON:0005282,1.08e-12,2;UBERON:0005281,1.08e-12,2;UBERON:0002365,2.17e-11,31;UBERON:0002330,2.17e-11,31;UBERON:0002417,3.93e-10,60;UBERON:0000916,3.93e-10,60;UBERON:0002368,5.96e-10,35;UBERON:0005172,1.69e-09,54;UBERON:0005173,1.69e-09,54;UBERON:0002190,5.40e-09,3;UBERON:0009663,3.65e-08,7;UBERON:0002038,1.63e-07,1;UBERON:0009661,1.63e-07,1;UBERON:0002950,1.63e-07,1;UBERON:0001891,1.63e-07,1;UBERON:0009616,1.63e-07,1;UBERON:0010286,1.63e-07,1;UBERON:0000949,1.79e-07,45;UBERON:0002784,7.87e-07,4 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0,0,1.34088328328186,0,2.53299878168311,0,3.91778442299758,0,0,0,0,0.618831764800233,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,4.06035134042909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36221684880438,2.88087962239999,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,32.956309053676,23.587853200263,57.8974108547776,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.285955987316295,2.17048642156577,0,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.50051156317903,0,0,0,0,0,0,0,0,0,0,0,1.37060810223918,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0.699869440489966,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36968812325356,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,11.5999932069567,0,0,0,0,0,0,2.65722415744152,0,0,0.221158519862449,0,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0.539209063845416,0,0.937057782901357,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483781656445426,0.219267951258557,0.492692742319255,0,0,0.225980740780532,0,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,1.23214841002794,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,1.49688046383725,0.988990300573997,2.42652757875066,0.590564889088493,0,0,0.544813624446302,0,0,0,0,0,0.182248669974074,0,8.6686278029118,4.24882163893485,0,0,0,0,0,0,0,0,0,0,0,0,0,51.8794907220412,25.1763088933221,0.775697738169303,0.66116300871345,0,0,0,0,0,0,0,0,0,2.1760712134779,3.5096585163178,2.45076461410769,2.29510841496863,0,0,0,0.625954653532499,0.573409195690071,0.665574309221114,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.957803154342908,0,0,0.207471757392654,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,1.44680757550829,0.253663240775627,0,0,0.992422356778588,0,0,0,0.672567444437648,0,0,0.354809480650555,0,0,0.271878931907327,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,1.1436247068265,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0.0644578879735772,0,0,0,0,0,0,5.3035645766037,0,0.135982980381829,0,0,0,0,0,0,0.437062287854782,0.126698501011437,0,0,0,0,0.151557396436479,0,6.63335551567024,1.24119595034274,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0.359300808426348,0,0,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p4@PC | |||
}} |
Revision as of 19:12, 10 September 2013
Short description: | p4@PC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PC_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_NM_022172, uc001ojn.1_5end |
EntrezGene: | PC |
HGNC: | 8636 |
UniProt: | P11498 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.58e-24 | 15 |
fibroblast of choroid plexus | 1.08e-12 | 2 |
hepatocyte | 1.36e-12 | 12 |
central nervous system pericyte | 3.12e-12 | 2 |
subcutaneous fat cell | 5.40e-09 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.