FFCP PHASE1:Hg19::chr11:694676..694693,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:694676..694693,+|id=chr11:694676..694693,+|ontology_enrichment_celltype=CL:0000066!3.16e-19!254;CL:0002076!1.36e-16!43;CL:0000223!1.30e-15!59;CL:0002368!5.19e-09!13;CL:0002251!7.68e-09!21;CL:0000082!9.09e-07!19|ontology_enrichment_celltype_v019=CL:0002535;3.07e-07;2!CL:0000039;4.75e-07;7!CL:0000586;4.75e-07;7!CL:0000123;5.50e-07;2!CL:0000242;5.50e-07;2|ontology_enrichment_celltype_v019_2=CL:0000066,8.07e-12,253;CL:0002535,2.80e-07,2;CL:0000242,5.34e-07,2;CL:0000039,6.90e-07,7;CL:0000586,6.90e-07,7;CL:0002076,9.40e-07,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!7.28e-21!106;DOID:0050687!2.81e-14!143;DOID:299!4.68e-08!25|ontology_enrichment_disease_v019=DOID:299;4.13e-13;25!DOID:5093;8.57e-13;4!DOID:1612;8.57e-13;4!DOID:3119;9.71e-10;14!DOID:305;1.47e-08;106!DOID:3493;1.34e-07;2|ontology_enrichment_disease_v019_2=DOID:305,8.85e-17,106;DOID:0050687,1.37e-13,143;DOID:299,3.87e-13,25;DOID:5093,7.73e-13,4;DOID:1612,7.73e-13,4;DOID:3119,9.46e-10,14;DOID:3493,1.32e-07,2;DOID:162,5.24e-07,235|ontology_enrichment_uberon=UBERON:0004119!2.51e-26!169;UBERON:0000925!2.51e-26!169;UBERON:0006595!2.51e-26!169;UBERON:0001007!9.54e-23!155;UBERON:0001555!9.54e-23!155;UBERON:0007026!9.54e-23!155;UBERON:0004921!2.65e-21!129;UBERON:0004185!2.65e-21!129;UBERON:0000077!7.27e-20!130;UBERON:0001004!2.51e-18!72;UBERON:0001041!1.71e-15!98;UBERON:0000065!9.63e-14!53;UBERON:0005911!2.18e-13!82;UBERON:0000466!2.20e-11!126;UBERON:0000072!3.99e-10!46;UBERON:0000464!1.20e-09!104;UBERON:0005153!2.52e-09!37;UBERON:0005178!3.10e-09!34;UBERON:0002224!3.10e-09!34;UBERON:0008947!3.69e-09!38;UBERON:0003258!3.69e-09!38;UBERON:0005181!8.21e-09!35;UBERON:0000161!9.66e-09!35;UBERON:0000166!2.60e-08!21;UBERON:0004807!2.80e-08!28;UBERON:0002048!1.04e-07!22;UBERON:0000117!1.04e-07!22;UBERON:0000171!1.04e-07!22;UBERON:0000170!1.04e-07!22;UBERON:0005597!1.04e-07!22;UBERON:0000118!1.04e-07!22;UBERON:0000915!1.76e-07!52;UBERON:0003929!1.77e-07!54;UBERON:0004802!9.09e-07!19;UBERON:0000115!9.09e-07!19|ontology_enrichment_uberon_v019=UBERON:0004921;1.81e-14;33!UBERON:0005409;1.88e-09;22!UBERON:0000160;1.37e-07;17!UBERON:0006955;3.07e-07;2!UBERON:0004801;3.07e-07;2!UBERON:0002294;3.62e-07;7!UBERON:0001173;3.62e-07;7!UBERON:0001041;3.70e-07;14!UBERON:0006562;4.05e-07;2!UBERON:0001829;8.88e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.57e-13,160;UBERON:0000925,7.57e-13,160;UBERON:0006595,7.57e-13,160;UBERON:0004921,1.49e-12,118;UBERON:0001007,1.02e-11,145;UBERON:0001555,1.02e-11,145;UBERON:0007026,1.02e-11,145;UBERON:0005409,4.20e-08,25;UBERON:0001041,1.35e-07,87;UBERON:0005911,1.55e-07,82;UBERON:0000160,1.68e-07,17;UBERON:0006955,2.80e-07,2;UBERON:0004801,2.80e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0.977766799900771,0,0,0,0.883817722424512,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,1.82147644146271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,0.860413786167011,0,0.265059536642971,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.220587945464788,0,0,0.404493924480493,0,0,0,0,0,0,0,0.982827216677626,0,0,15.8655085720616,0,0.219500570817251,5.62008766288098,0.502644862058154,0,0,0,0,0,0,0,0,0,2.37061319387782,3.43394464837949,0,0,0,0.93733833986777,0.335964256397719,0,0.447792613514241,0.871901815541886,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,16.0657612866517,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,16.9203229428271,0.40101294060657,9.11601790465374,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.721287081534056,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,0.510450849978337,3.94515345336645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0,1.08890984861323,1.22386941009813,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30423242938906,0,0,0,0,7.40107902686839,2.37571744666111,1.22864280839693,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:694676..694693,+ | |||
|id=chr11:694676..694693,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.16e-19!254;CL:0002076!1.36e-16!43;CL:0000223!1.30e-15!59;CL:0002368!5.19e-09!13;CL:0002251!7.68e-09!21;CL:0000082!9.09e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002535;3.07e-07;2!CL:0000039;4.75e-07;7!CL:0000586;4.75e-07;7!CL:0000123;5.50e-07;2!CL:0000242;5.50e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.07e-12,253;CL:0002535,2.80e-07,2;CL:0000242,5.34e-07,2;CL:0000039,6.90e-07,7;CL:0000586,6.90e-07,7;CL:0002076,9.40e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.28e-21!106;DOID:0050687!2.81e-14!143;DOID:299!4.68e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;4.13e-13;25!DOID:5093;8.57e-13;4!DOID:1612;8.57e-13;4!DOID:3119;9.71e-10;14!DOID:305;1.47e-08;106!DOID:3493;1.34e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.85e-17,106;DOID:0050687,1.37e-13,143;DOID:299,3.87e-13,25;DOID:5093,7.73e-13,4;DOID:1612,7.73e-13,4;DOID:3119,9.46e-10,14;DOID:3493,1.32e-07,2;DOID:162,5.24e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.51e-26!169;UBERON:0000925!2.51e-26!169;UBERON:0006595!2.51e-26!169;UBERON:0001007!9.54e-23!155;UBERON:0001555!9.54e-23!155;UBERON:0007026!9.54e-23!155;UBERON:0004921!2.65e-21!129;UBERON:0004185!2.65e-21!129;UBERON:0000077!7.27e-20!130;UBERON:0001004!2.51e-18!72;UBERON:0001041!1.71e-15!98;UBERON:0000065!9.63e-14!53;UBERON:0005911!2.18e-13!82;UBERON:0000466!2.20e-11!126;UBERON:0000072!3.99e-10!46;UBERON:0000464!1.20e-09!104;UBERON:0005153!2.52e-09!37;UBERON:0005178!3.10e-09!34;UBERON:0002224!3.10e-09!34;UBERON:0008947!3.69e-09!38;UBERON:0003258!3.69e-09!38;UBERON:0005181!8.21e-09!35;UBERON:0000161!9.66e-09!35;UBERON:0000166!2.60e-08!21;UBERON:0004807!2.80e-08!28;UBERON:0002048!1.04e-07!22;UBERON:0000117!1.04e-07!22;UBERON:0000171!1.04e-07!22;UBERON:0000170!1.04e-07!22;UBERON:0005597!1.04e-07!22;UBERON:0000118!1.04e-07!22;UBERON:0000915!1.76e-07!52;UBERON:0003929!1.77e-07!54;UBERON:0004802!9.09e-07!19;UBERON:0000115!9.09e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.81e-14;33!UBERON:0005409;1.88e-09;22!UBERON:0000160;1.37e-07;17!UBERON:0006955;3.07e-07;2!UBERON:0004801;3.07e-07;2!UBERON:0002294;3.62e-07;7!UBERON:0001173;3.62e-07;7!UBERON:0001041;3.70e-07;14!UBERON:0006562;4.05e-07;2!UBERON:0001829;8.88e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.57e-13,160;UBERON:0000925,7.57e-13,160;UBERON:0006595,7.57e-13,160;UBERON:0004921,1.49e-12,118;UBERON:0001007,1.02e-11,145;UBERON:0001555,1.02e-11,145;UBERON:0007026,1.02e-11,145;UBERON:0005409,4.20e-08,25;UBERON:0001041,1.35e-07,87;UBERON:0005911,1.55e-07,82;UBERON:0000160,1.68e-07,17;UBERON:0006955,2.80e-07,2;UBERON:0004801,2.80e-07,2 | |||
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|short_description=p@chr11:694676..694693,+ | |||
}} |
Revision as of 19:23, 10 September 2013
Short description: | p@chr11:694676..694693, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:694676..694693, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.07e-12 | 253 |
epithelial cell of cervix | 2.80e-07 | 2 |
Merkel cell | 5.34e-07 | 2 |
germ line cell | 6.90e-07 | 7 |
germ cell | 6.90e-07 | 7 |
endo-epithelial cell | 9.40e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.57e-13 | 160 |
endoderm | 7.57e-13 | 160 |
presumptive endoderm | 7.57e-13 | 160 |
subdivision of digestive tract | 1.49e-12 | 118 |
digestive system | 1.02e-11 | 145 |
digestive tract | 1.02e-11 | 145 |
primitive gut | 1.02e-11 | 145 |
gastrointestinal system | 4.20e-08 | 25 |
foregut | 1.35e-07 | 87 |
endo-epithelium | 1.55e-07 | 82 |
intestine | 1.68e-07 | 17 |
uterine epithelium | 2.80e-07 | 2 |
cervix epithelium | 2.80e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.85e-17 | 106 |
cell type cancer | 1.37e-13 | 143 |
adenocarcinoma | 3.87e-13 | 25 |
thoracic cancer | 7.73e-13 | 4 |
breast cancer | 7.73e-13 | 4 |
gastrointestinal system cancer | 9.46e-10 | 14 |
signet ring cell adenocarcinoma | 1.32e-07 | 2 |
cancer | 5.24e-07 | 235 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.