FFCP PHASE1:Hg19::chr12:104971039..104971042,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C13|description=CAGE_peak_at_chr12:104971039..104971042,+|id=chr12:104971039..104971042,+|ontology_enrichment_celltype=CL:0000738!6.33e-29!140;CL:0000037!8.77e-29!172;CL:0000566!8.77e-29!172;CL:0002032!2.60e-27!165;CL:0000837!2.60e-27!165;CL:0000988!1.23e-26!182;CL:0002087!1.51e-24!119;CL:0002031!4.05e-24!124;CL:0000763!8.08e-17!112;CL:0000049!8.08e-17!112;CL:0000766!3.42e-16!76;CL:0000557!2.76e-14!71;CL:0000839!1.32e-13!70;CL:0002009!2.82e-13!65;CL:0002194!5.16e-13!63;CL:0000576!5.16e-13!63;CL:0000040!5.16e-13!63;CL:0000559!5.16e-13!63;CL:0002057!1.99e-12!42;CL:0000860!6.77e-11!45;CL:0000838!1.98e-10!52;CL:0000542!5.01e-10!53;CL:0000051!5.01e-10!53;CL:0000084!6.73e-08!25;CL:0000827!6.73e-08!25;CL:0000791!3.24e-07!18;CL:0000789!3.24e-07!18;CL:0002420!3.24e-07!18;CL:0002419!3.24e-07!18;CL:0000790!3.24e-07!18|ontology_enrichment_celltype_v019=CL:0002393;2.38e-10;6!CL:0002397;2.38e-10;6!CL:0000775;7.02e-10;3!CL:0000236;7.52e-08;13!CL:0000037;1.43e-07;1!CL:0001024;1.43e-07;1|ontology_enrichment_celltype_v019_2=CL:0000775,7.05e-10,3;CL:0000738,7.42e-10,136;CL:0000037,1.36e-09,168;CL:0002032,6.33e-09,161;CL:0000837,6.33e-09,161;CL:0000988,6.48e-09,177;CL:0002031,1.15e-08,120;CL:0000860,1.68e-08,42;CL:0002057,1.68e-08,42;CL:0002087,7.69e-08,115;CL:0001024,7.76e-08,1;CL:0000236,2.13e-07,14;CL:0000473,2.70e-07,48;CL:0000234,2.70e-07,48;CL:0002393,3.70e-07,9;CL:0002397,3.70e-07,9;CL:0000766,5.14e-07,72;CL:0002009,7.95e-07,61|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.76e-15!102;UBERON:0003061!3.76e-15!102;UBERON:0002193!2.07e-13!112;UBERON:0002371!6.19e-12!80;UBERON:0001049!1.77e-11!57;UBERON:0005068!1.77e-11!57;UBERON:0006241!1.77e-11!57;UBERON:0007135!1.77e-11!57;UBERON:0001474!1.45e-10!86;UBERON:0002780!2.04e-10!41;UBERON:0001890!2.04e-10!41;UBERON:0006240!2.04e-10!41;UBERON:0003080!5.96e-10!42;UBERON:0007023!1.32e-09!115;UBERON:0002020!3.79e-09!34;UBERON:0003528!3.79e-09!34;UBERON:0002616!5.91e-09!59;UBERON:0001893!1.03e-08!34;UBERON:0002791!2.95e-08!33;UBERON:0002405!3.93e-08!115;UBERON:0001869!6.57e-08!32;UBERON:0004765!1.45e-07!101;UBERON:0001434!1.45e-07!101|ontology_enrichment_uberon_v019=UBERON:0002171;4.71e-08;1!UBERON:0006518;4.71e-08;1!UBERON:0008949;4.71e-08;1!UBERON:0000101;4.71e-08;1!UBERON:0002167;4.71e-08;1!UBERON:0001874;1.43e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.89e-08,1;UBERON:0006518,4.89e-08,1;UBERON:0008949,4.89e-08,1;UBERON:0000101,4.89e-08,1;UBERON:0002167,4.89e-08,1;UBERON:0001874,1.39e-07,1|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.229240217243854,0.164201178899891,0.393553906568396,0.393364276848904,0,0.309632246632152,0,0,0,0,0.142169232487422,1.76160263600908,3.32397245119126,1.80490002723128,2.38711957787437,0.447830948479849,0,0.77272670290256,0.436194716338694,0,0,0.464858073811369,1.23350366406548,1.23882548358041,0,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0.376484679085209,1.09162460023138,0,0,0.320929027076094,0,0,0.598390972864896,0.426224750532694,0.290209238628584,0,0.622822248995575,2.00998932205395,0.521482918420201,0.217188844705117,0,0.736555271975129,0.316462387440884,0,0.212604299965044,0.209658645508376,0.786300418025466,1.05123824989054,0.32145117339416,0.855038231223746,0.59675003159727,0.182664153764634,0,0,0,1.28019066769952,0.400395987036012,0.574752439954483,0,0,1.70763890732835,1.76171156811282,1.14681968437569,0,0,0.263384084775077,0.196709770113833,0.393010762749165,1.02800749499755,0.167186495390678,0.651844533267181,0,0,0.557052284425868,0.589211814949674,0.221533894583621,0.541607727530031,1.66518715643378,1.30059347559878,1.47994114143309,0.552700035571697,0.289803085735052,0,0,0,0.566546713487831,0.383220493601921,0,0,0.318565414324097,0.651083453856419,0,0,0,0,0.236777252044017,0.821127996921047,0.403213486449465,0.534880391567015,1.59306844271079,0,0,0,0,0,0.144846518960824,0,0,0,0,0.263504357079378,0.196468613246569,0,0,0.649094787309367,0.348259474598534,0.664789802594326,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.44024217006613,0.207328115540772,0.288239906833923,0.50496973370552,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr12:104971039..104971042,+ | |||
|id=chr12:104971039..104971042,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.33e-29!140;CL:0000037!8.77e-29!172;CL:0000566!8.77e-29!172;CL:0002032!2.60e-27!165;CL:0000837!2.60e-27!165;CL:0000988!1.23e-26!182;CL:0002087!1.51e-24!119;CL:0002031!4.05e-24!124;CL:0000763!8.08e-17!112;CL:0000049!8.08e-17!112;CL:0000766!3.42e-16!76;CL:0000557!2.76e-14!71;CL:0000839!1.32e-13!70;CL:0002009!2.82e-13!65;CL:0002194!5.16e-13!63;CL:0000576!5.16e-13!63;CL:0000040!5.16e-13!63;CL:0000559!5.16e-13!63;CL:0002057!1.99e-12!42;CL:0000860!6.77e-11!45;CL:0000838!1.98e-10!52;CL:0000542!5.01e-10!53;CL:0000051!5.01e-10!53;CL:0000084!6.73e-08!25;CL:0000827!6.73e-08!25;CL:0000791!3.24e-07!18;CL:0000789!3.24e-07!18;CL:0002420!3.24e-07!18;CL:0002419!3.24e-07!18;CL:0000790!3.24e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002393;2.38e-10;6!CL:0002397;2.38e-10;6!CL:0000775;7.02e-10;3!CL:0000236;7.52e-08;13!CL:0000037;1.43e-07;1!CL:0001024;1.43e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,7.05e-10,3;CL:0000738,7.42e-10,136;CL:0000037,1.36e-09,168;CL:0002032,6.33e-09,161;CL:0000837,6.33e-09,161;CL:0000988,6.48e-09,177;CL:0002031,1.15e-08,120;CL:0000860,1.68e-08,42;CL:0002057,1.68e-08,42;CL:0002087,7.69e-08,115;CL:0001024,7.76e-08,1;CL:0000236,2.13e-07,14;CL:0000473,2.70e-07,48;CL:0000234,2.70e-07,48;CL:0002393,3.70e-07,9;CL:0002397,3.70e-07,9;CL:0000766,5.14e-07,72;CL:0002009,7.95e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.76e-15!102;UBERON:0003061!3.76e-15!102;UBERON:0002193!2.07e-13!112;UBERON:0002371!6.19e-12!80;UBERON:0001049!1.77e-11!57;UBERON:0005068!1.77e-11!57;UBERON:0006241!1.77e-11!57;UBERON:0007135!1.77e-11!57;UBERON:0001474!1.45e-10!86;UBERON:0002780!2.04e-10!41;UBERON:0001890!2.04e-10!41;UBERON:0006240!2.04e-10!41;UBERON:0003080!5.96e-10!42;UBERON:0007023!1.32e-09!115;UBERON:0002020!3.79e-09!34;UBERON:0003528!3.79e-09!34;UBERON:0002616!5.91e-09!59;UBERON:0001893!1.03e-08!34;UBERON:0002791!2.95e-08!33;UBERON:0002405!3.93e-08!115;UBERON:0001869!6.57e-08!32;UBERON:0004765!1.45e-07!101;UBERON:0001434!1.45e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;4.71e-08;1!UBERON:0006518;4.71e-08;1!UBERON:0008949;4.71e-08;1!UBERON:0000101;4.71e-08;1!UBERON:0002167;4.71e-08;1!UBERON:0001874;1.43e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.89e-08,1;UBERON:0006518,4.89e-08,1;UBERON:0008949,4.89e-08,1;UBERON:0000101,4.89e-08,1;UBERON:0002167,4.89e-08,1;UBERON:0001874,1.39e-07,1 | |||
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| |||
|short_description=p@chr12:104971039..104971042,+ | |||
}} |
Revision as of 20:34, 10 September 2013
Short description: | p@chr12:104971039..104971042, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:104971039..104971042, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 7.05e-10 | 3 |
leukocyte | 7.42e-10 | 136 |
hematopoietic stem cell | 1.36e-09 | 168 |
hematopoietic oligopotent progenitor cell | 6.33e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.33e-09 | 161 |
hematopoietic cell | 6.48e-09 | 177 |
hematopoietic lineage restricted progenitor cell | 1.15e-08 | 120 |
classical monocyte | 1.68e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-08 | 42 |
nongranular leukocyte | 7.69e-08 | 115 |
CD34-positive, CD38-negative hematopoietic stem cell | 7.76e-08 | 1 |
B cell | 2.13e-07 | 14 |
defensive cell | 2.70e-07 | 48 |
phagocyte | 2.70e-07 | 48 |
intermediate monocyte | 3.70e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.70e-07 | 9 |
myeloid leukocyte | 5.14e-07 | 72 |
macrophage dendritic cell progenitor | 7.95e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.89e-08 | 1 |
right lung lobe | 4.89e-08 | 1 |
lower lobe of lung | 4.89e-08 | 1 |
lobe of lung | 4.89e-08 | 1 |
right lung | 4.89e-08 | 1 |
putamen | 1.39e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.