FFCP PHASE1:Hg19::chr12:20975224..20975226,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:20975224..20975226,-|id=chr12:20975224..20975226,-|ontology_enrichment_celltype=CL:0000066!5.10e-27!254;CL:0000076!2.65e-07!62|ontology_enrichment_celltype_v019=CL:0000319;4.86e-10;1!CL:1001319;1.15e-09;1!CL:1000600;1.15e-09;1!CL:0002251;7.75e-07;20|ontology_enrichment_celltype_v019_2=CL:0000066,1.74e-12,253;CL:0000319,4.87e-10,1;CL:1001319,1.25e-09,1;CL:1000600,1.25e-09,1;CL:0000076,2.29e-07,63;CL:0002251,8.12e-07,20|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!5.86e-67!106;DOID:0050687!3.70e-54!143;DOID:162!8.70e-35!235;DOID:14566!7.75e-34!239;DOID:1749!2.03e-25!14;DOID:299!3.75e-13!25;DOID:3493!1.74e-08!2;DOID:4074!2.01e-08!2;DOID:4905!2.01e-08!2;DOID:3498!2.01e-08!2|ontology_enrichment_disease_v019=DOID:1749;8.87e-37;14!DOID:3030;4.86e-10;1!DOID:6193;5.79e-10;1!DOID:3111;8.17e-10;1!DOID:3603;8.17e-10;1!DOID:305;2.04e-08;106!DOID:299;2.56e-08;25!DOID:7;2.31e-07;39|ontology_enrichment_disease_v019_2=DOID:1749,1.18e-36,14;DOID:305,1.23e-34,106;DOID:0050687,1.99e-27,143;DOID:162,7.59e-17,235;DOID:14566,2.01e-16,239;DOID:3030,4.87e-10,1;DOID:6193,5.79e-10,1;DOID:7,8.44e-10,39;DOID:3111,8.91e-10,1;DOID:3603,8.91e-10,1;DOID:299,2.57e-08,25|ontology_enrichment_uberon=UBERON:0001737!2.12e-23!9;UBERON:0008947!7.34e-13!38;UBERON:0003258!7.34e-13!38;UBERON:0001007!1.73e-12!155;UBERON:0001555!1.73e-12!155;UBERON:0007026!1.73e-12!155;UBERON:0004119!6.47e-12!169;UBERON:0000925!6.47e-12!169;UBERON:0006595!6.47e-12!169;UBERON:0001557!2.04e-10!19;UBERON:0000072!3.89e-10!46;UBERON:0002394!9.90e-10!4;UBERON:0003928!9.90e-10!4;UBERON:0003343!2.18e-09!4;UBERON:0004785!2.18e-09!4;UBERON:0002294!3.06e-09!7;UBERON:0001173!3.06e-09!7;UBERON:0004912!3.06e-09!7;UBERON:0004921!3.91e-09!129;UBERON:0004185!3.91e-09!129;UBERON:0000077!4.08e-09!130;UBERON:0001004!4.93e-09!72;UBERON:0001041!9.44e-09!98;UBERON:0000065!1.94e-08!53;UBERON:0000344!6.63e-08!12;UBERON:0003729!1.40e-07!5|ontology_enrichment_uberon_v019=UBERON:0002394;4.40e-20;4!UBERON:0003928;4.40e-20;4!UBERON:0003343;1.89e-19;4!UBERON:0004785;1.89e-19;4!UBERON:0000058;4.26e-14;10!UBERON:0000974;3.65e-13;6!UBERON:0002294;1.02e-11;7!UBERON:0001173;1.02e-11;7!UBERON:0000344;2.39e-10;20!UBERON:0004913;3.74e-10;1!UBERON:0003703;3.74e-10;1!UBERON:0001174;3.74e-10;1!UBERON:0004914;3.74e-10;1!UBERON:0000997;5.79e-10;1!UBERON:0005056;5.79e-10;1!UBERON:0004176;5.79e-10;1!UBERON:0004645;1.15e-09;1!UBERON:0001256;1.15e-09;1!UBERON:0001259;1.15e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.44e-19,4;UBERON:0004785,2.44e-19,4;UBERON:0002394,1.33e-13,6;UBERON:0003928,1.33e-13,6;UBERON:0000344,2.70e-10,20;UBERON:0004913,3.74e-10,1;UBERON:0003703,3.74e-10,1;UBERON:0001174,3.74e-10,1;UBERON:0004914,3.74e-10,1;UBERON:0000997,6.31e-10,1;UBERON:0005056,6.31e-10,1;UBERON:0004645,1.25e-09,1;UBERON:0001256,1.25e-09,1;UBERON:0001259,1.25e-09,1;UBERON:0002294,3.10e-09,9;UBERON:0001173,3.10e-09,9;UBERON:0004912,3.10e-09,9;UBERON:0000974,4.65e-08,10;UBERON:0000058,1.72e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.482022059766964,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,11.3654458722565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3119641071838,3.75944466818779,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,2.18502341580683,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,4.21367308881824,0.783532859223623,0,4.29965081179041,0.19351266257817,0,0.164230914106418,0,0,0,0,0,0,0,0.881747022766871,0,0,0,0,0,0.14405479798815,1.86378803348149,0,1.08723364858891,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88195521672762,0.704815022316672,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:20975224..20975226,- | |||
|id=chr12:20975224..20975226,- | |||
|ontology_enrichment_celltype=CL:0000066!5.10e-27!254;CL:0000076!2.65e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000319;4.86e-10;1!CL:1001319;1.15e-09;1!CL:1000600;1.15e-09;1!CL:0002251;7.75e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.74e-12,253;CL:0000319,4.87e-10,1;CL:1001319,1.25e-09,1;CL:1000600,1.25e-09,1;CL:0000076,2.29e-07,63;CL:0002251,8.12e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.86e-67!106;DOID:0050687!3.70e-54!143;DOID:162!8.70e-35!235;DOID:14566!7.75e-34!239;DOID:1749!2.03e-25!14;DOID:299!3.75e-13!25;DOID:3493!1.74e-08!2;DOID:4074!2.01e-08!2;DOID:4905!2.01e-08!2;DOID:3498!2.01e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.87e-37;14!DOID:3030;4.86e-10;1!DOID:6193;5.79e-10;1!DOID:3111;8.17e-10;1!DOID:3603;8.17e-10;1!DOID:305;2.04e-08;106!DOID:299;2.56e-08;25!DOID:7;2.31e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.18e-36,14;DOID:305,1.23e-34,106;DOID:0050687,1.99e-27,143;DOID:162,7.59e-17,235;DOID:14566,2.01e-16,239;DOID:3030,4.87e-10,1;DOID:6193,5.79e-10,1;DOID:7,8.44e-10,39;DOID:3111,8.91e-10,1;DOID:3603,8.91e-10,1;DOID:299,2.57e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.12e-23!9;UBERON:0008947!7.34e-13!38;UBERON:0003258!7.34e-13!38;UBERON:0001007!1.73e-12!155;UBERON:0001555!1.73e-12!155;UBERON:0007026!1.73e-12!155;UBERON:0004119!6.47e-12!169;UBERON:0000925!6.47e-12!169;UBERON:0006595!6.47e-12!169;UBERON:0001557!2.04e-10!19;UBERON:0000072!3.89e-10!46;UBERON:0002394!9.90e-10!4;UBERON:0003928!9.90e-10!4;UBERON:0003343!2.18e-09!4;UBERON:0004785!2.18e-09!4;UBERON:0002294!3.06e-09!7;UBERON:0001173!3.06e-09!7;UBERON:0004912!3.06e-09!7;UBERON:0004921!3.91e-09!129;UBERON:0004185!3.91e-09!129;UBERON:0000077!4.08e-09!130;UBERON:0001004!4.93e-09!72;UBERON:0001041!9.44e-09!98;UBERON:0000065!1.94e-08!53;UBERON:0000344!6.63e-08!12;UBERON:0003729!1.40e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;4.40e-20;4!UBERON:0003928;4.40e-20;4!UBERON:0003343;1.89e-19;4!UBERON:0004785;1.89e-19;4!UBERON:0000058;4.26e-14;10!UBERON:0000974;3.65e-13;6!UBERON:0002294;1.02e-11;7!UBERON:0001173;1.02e-11;7!UBERON:0000344;2.39e-10;20!UBERON:0004913;3.74e-10;1!UBERON:0003703;3.74e-10;1!UBERON:0001174;3.74e-10;1!UBERON:0004914;3.74e-10;1!UBERON:0000997;5.79e-10;1!UBERON:0005056;5.79e-10;1!UBERON:0004176;5.79e-10;1!UBERON:0004645;1.15e-09;1!UBERON:0001256;1.15e-09;1!UBERON:0001259;1.15e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.44e-19,4;UBERON:0004785,2.44e-19,4;UBERON:0002394,1.33e-13,6;UBERON:0003928,1.33e-13,6;UBERON:0000344,2.70e-10,20;UBERON:0004913,3.74e-10,1;UBERON:0003703,3.74e-10,1;UBERON:0001174,3.74e-10,1;UBERON:0004914,3.74e-10,1;UBERON:0000997,6.31e-10,1;UBERON:0005056,6.31e-10,1;UBERON:0004645,1.25e-09,1;UBERON:0001256,1.25e-09,1;UBERON:0001259,1.25e-09,1;UBERON:0002294,3.10e-09,9;UBERON:0001173,3.10e-09,9;UBERON:0004912,3.10e-09,9;UBERON:0000974,4.65e-08,10;UBERON:0000058,1.72e-07,19 | |||
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|short_description=p@chr12:20975224..20975226,- | |||
}} |
Revision as of 22:07, 10 September 2013
Short description: | p@chr12:20975224..20975226, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:20975224..20975226, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.74e-12 | 253 |
mucus secreting cell | 4.87e-10 | 1 |
bladder cell | 1.25e-09 | 1 |
lower urinary tract cell | 1.25e-09 | 1 |
squamous epithelial cell | 2.29e-07 | 63 |
epithelial cell of alimentary canal | 8.12e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.44e-19 | 4 |
respiratory system mucosa | 2.44e-19 | 4 |
bile duct | 1.33e-13 | 6 |
digestive system duct | 1.33e-13 | 6 |
mucosa | 2.70e-10 | 20 |
hepatopancreatic ampulla | 3.74e-10 | 1 |
extrahepatic bile duct | 3.74e-10 | 1 |
common bile duct | 3.74e-10 | 1 |
duodenal papilla | 3.74e-10 | 1 |
mammalian vulva | 6.31e-10 | 1 |
external female genitalia | 6.31e-10 | 1 |
urinary bladder urothelium | 1.25e-09 | 1 |
wall of urinary bladder | 1.25e-09 | 1 |
mucosa of urinary bladder | 1.25e-09 | 1 |
biliary system | 3.10e-09 | 9 |
biliary tree | 3.10e-09 | 9 |
biliary bud | 3.10e-09 | 9 |
neck | 4.65e-08 | 10 |
duct | 1.72e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.18e-36 | 14 |
carcinoma | 1.23e-34 | 106 |
cell type cancer | 1.99e-27 | 143 |
cancer | 7.59e-17 | 235 |
disease of cellular proliferation | 2.01e-16 | 239 |
mucinous adenocarcinoma | 4.87e-10 | 1 |
epithelioid sarcoma | 5.79e-10 | 1 |
disease of anatomical entity | 8.44e-10 | 39 |
cystadenocarcinoma | 8.91e-10 | 1 |
mucinous cystadenocarcinoma | 8.91e-10 | 1 |
adenocarcinoma | 2.57e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.