FFCP PHASE1:Hg19::chr12:52542600..52542632,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:52542600..52542632,+|id=chr12:52542600..52542632,+|ontology_enrichment_celltype=CL:0000066!6.08e-22!254;CL:0002076!4.66e-15!43;CL:0000223!5.91e-12!59;CL:0002368!4.70e-10!13;CL:0000068!9.48e-08!3;CL:0000069!9.48e-08!3;CL:0000307!9.48e-08!3;CL:0000377!9.48e-08!3|ontology_enrichment_celltype_v019=CL:0000307;1.70e-27;3!CL:0002202;7.57e-10;9!CL:0002632;7.57e-10;9!CL:0002623;7.76e-08;3!CL:0002368;4.32e-07;13|ontology_enrichment_celltype_v019_2=CL:0000068,2.08e-27,3;CL:0000069,2.08e-27,3;CL:0000307,2.08e-27,3;CL:0000377,2.08e-27,3;CL:0002202,8.09e-10,9;CL:0002632,8.09e-10,9;CL:0002623,7.76e-08,3;CL:0002368,4.52e-07,13|ontology_enrichment_development_v019=CL:0000377;1.70e-27;3|ontology_enrichment_disease=DOID:305!1.94e-17!106;DOID:0050687!2.21e-10!143;DOID:299!9.34e-07!25|ontology_enrichment_disease_v019=DOID:5093;4.68e-21;4!DOID:1612;4.68e-21;4!DOID:4074;3.02e-11;2!DOID:4905;3.02e-11;2!DOID:3498;3.02e-11;2|ontology_enrichment_disease_v019_2=DOID:5093,3.82e-21,4;DOID:1612,3.82e-21,4;DOID:4074,2.73e-11,2;DOID:4905,2.73e-11,2;DOID:3498,2.73e-11,2|ontology_enrichment_uberon=UBERON:0004119!5.70e-15!169;UBERON:0000925!5.70e-15!169;UBERON:0006595!5.70e-15!169;UBERON:0001004!4.21e-12!72;UBERON:0005631!2.33e-11!14;UBERON:0000158!2.33e-11!14;UBERON:0000065!3.53e-11!53;UBERON:0001007!3.58e-10!155;UBERON:0001555!3.58e-10!155;UBERON:0007026!3.58e-10!155;UBERON:0000072!1.90e-09!46;UBERON:0004921!5.85e-09!129;UBERON:0004185!5.85e-09!129;UBERON:0001737!1.78e-08!9;UBERON:0008947!3.61e-08!38;UBERON:0003258!3.61e-08!38;UBERON:0000305!5.41e-08!7;UBERON:0001557!1.33e-07!19;UBERON:0000077!1.58e-07!130;UBERON:0004871!6.25e-07!8|ontology_enrichment_uberon_v019=UBERON:0003126;2.18e-12;7!UBERON:0001005;2.18e-12;7!UBERON:0000310;5.15e-09;10!UBERON:0001443;2.82e-08;11!UBERON:0000059;4.49e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.37e-12,7;UBERON:0001005,2.37e-12,7;UBERON:0000310,4.75e-09,10;UBERON:0001443,2.62e-08,11;UBERON:0000059,4.49e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0.505754070234305,0,0.220587945464788,0.217879444092406,0.237270619111097,0.539325232640658,0.98110732562673,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,3.95102198979638,3.43394464837949,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671624264166535,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,2.01090682660736,3.26672954583968,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.71623345421307,0.296964680832639,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,1.83309043480088,0,0,0,0,0,0,0,2.34797542718508,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.195984794828755,0,0.17472666824203,0,0,0.146178634172371,0.164230914106418,0.193978032976839,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.670869375198532,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.532214220975833,0,0,0,0,0,0.222462803784138,0.078493092850514,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0,0,0,0,0.22589216407792,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.713921808193872,0.534434810531121,3.21632148371957,0,0,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0.665756774185513,0,0|short_description=p@chr12:52542600..52542632,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:52542600..52542632,+ | |||
|id=chr12:52542600..52542632,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.08e-22!254;CL:0002076!4.66e-15!43;CL:0000223!5.91e-12!59;CL:0002368!4.70e-10!13;CL:0000068!9.48e-08!3;CL:0000069!9.48e-08!3;CL:0000307!9.48e-08!3;CL:0000377!9.48e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.70e-27;3!CL:0002202;7.57e-10;9!CL:0002632;7.57e-10;9!CL:0002623;7.76e-08;3!CL:0002368;4.32e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.08e-27,3;CL:0000069,2.08e-27,3;CL:0000307,2.08e-27,3;CL:0000377,2.08e-27,3;CL:0002202,8.09e-10,9;CL:0002632,8.09e-10,9;CL:0002623,7.76e-08,3;CL:0002368,4.52e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000377;1.70e-27;3 | |||
|ontology_enrichment_disease=DOID:305!1.94e-17!106;DOID:0050687!2.21e-10!143;DOID:299!9.34e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.68e-21;4!DOID:1612;4.68e-21;4!DOID:4074;3.02e-11;2!DOID:4905;3.02e-11;2!DOID:3498;3.02e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.82e-21,4;DOID:1612,3.82e-21,4;DOID:4074,2.73e-11,2;DOID:4905,2.73e-11,2;DOID:3498,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.70e-15!169;UBERON:0000925!5.70e-15!169;UBERON:0006595!5.70e-15!169;UBERON:0001004!4.21e-12!72;UBERON:0005631!2.33e-11!14;UBERON:0000158!2.33e-11!14;UBERON:0000065!3.53e-11!53;UBERON:0001007!3.58e-10!155;UBERON:0001555!3.58e-10!155;UBERON:0007026!3.58e-10!155;UBERON:0000072!1.90e-09!46;UBERON:0004921!5.85e-09!129;UBERON:0004185!5.85e-09!129;UBERON:0001737!1.78e-08!9;UBERON:0008947!3.61e-08!38;UBERON:0003258!3.61e-08!38;UBERON:0000305!5.41e-08!7;UBERON:0001557!1.33e-07!19;UBERON:0000077!1.58e-07!130;UBERON:0004871!6.25e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;2.18e-12;7!UBERON:0001005;2.18e-12;7!UBERON:0000310;5.15e-09;10!UBERON:0001443;2.82e-08;11!UBERON:0000059;4.49e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.37e-12,7;UBERON:0001005,2.37e-12,7;UBERON:0000310,4.75e-09,10;UBERON:0001443,2.62e-08,11;UBERON:0000059,4.49e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0.505754070234305,0,0.220587945464788,0.217879444092406,0.237270619111097,0.539325232640658,0.98110732562673,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,3.95102198979638,3.43394464837949,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671624264166535,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,2.01090682660736,3.26672954583968,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.71623345421307,0.296964680832639,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0,0,0.1137934482855,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,1.83309043480088,0,0,0,0,0,0,0,2.34797542718508,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.195984794828755,0,0.17472666824203,0,0,0.146178634172371,0.164230914106418,0.193978032976839,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.670869375198532,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.532214220975833,0,0,0,0,0,0.222462803784138,0.078493092850514,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0,0.22910686854405,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0,0,0,0,0.22589216407792,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.713921808193872,0.534434810531121,3.21632148371957,0,0,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr12:52542600..52542632,+ | |||
}} |
Revision as of 23:06, 10 September 2013
Short description: | p@chr12:52542600..52542632, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:52542600..52542632, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.08e-27 | 3 |
branched duct epithelial cell | 2.08e-27 | 3 |
tracheal epithelial cell | 2.08e-27 | 3 |
tracheoblast | 2.08e-27 | 3 |
epithelial cell of tracheobronchial tree | 8.09e-10 | 9 |
epithelial cell of lower respiratory tract | 8.09e-10 | 9 |
acinar cell of salivary gland | 7.76e-08 | 3 |
respiratory epithelial cell | 4.52e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.37e-12 | 7 |
respiratory airway | 2.37e-12 | 7 |
breast | 4.75e-09 | 10 |
chest | 2.62e-08 | 11 |
large intestine | 4.49e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.82e-21 | 4 |
breast cancer | 3.82e-21 | 4 |
pancreas adenocarcinoma | 2.73e-11 | 2 |
pancreatic carcinoma | 2.73e-11 | 2 |
pancreatic ductal adenocarcinoma | 2.73e-11 | 2 |
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