FFCP PHASE1:Hg19::chr12:53873430..53873439,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:53873430..53873439,+|id=chr12:53873430..53873439,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000054;2.31e-08;2!CL:0000137;2.31e-08;2!CL:0000092;2.31e-08;2!CL:0002097;5.90e-08;2|ontology_enrichment_celltype_v019_2=CL:0000054,1.11e-08,2;CL:0000137,1.11e-08,2;CL:0000092,1.11e-08,2;CL:0002097,3.74e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!3.20e-29!235;DOID:14566!1.63e-27!239;DOID:0050687!9.09e-26!143;DOID:305!2.10e-13!106;DOID:0050686!5.09e-10!137;DOID:3095!1.76e-09!22;DOID:2994!1.76e-09!22;DOID:1115!1.60e-08!20|ontology_enrichment_disease_v019=DOID:1192;1.68e-11;3!DOID:201;4.90e-10;6!DOID:0060100;4.90e-10;6!DOID:200;2.31e-08;2!DOID:3193;2.31e-08;2!DOID:4305;2.31e-08;2!DOID:3910;2.31e-08;2!DOID:962;2.31e-08;2!DOID:1115;3.20e-08;20!DOID:154;5.90e-08;2!DOID:4236;5.90e-08;2!DOID:3908;2.67e-07;5|ontology_enrichment_disease_v019_2=DOID:0050687,7.56e-18,143;DOID:162,2.52e-17,235;DOID:14566,9.23e-17,239;DOID:1192,3.67e-12,3;DOID:201,2.73e-10,6;DOID:0060100,2.73e-10,6;DOID:3193,1.03e-08,2;DOID:962,1.03e-08,2;DOID:200,1.11e-08,2;DOID:4305,1.11e-08,2;DOID:0050686,2.44e-08,137;DOID:1115,3.11e-08,20;DOID:3910,3.60e-08,2;DOID:154,1.01e-07,2;DOID:4236,1.01e-07,2;DOID:305,1.27e-07,106;DOID:3908,3.86e-07,5|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004903;2.31e-08;2!UBERON:0002173;2.31e-08;2!UBERON:0002186;2.31e-08;2!UBERON:0005090;5.90e-08;2!UBERON:0001630;5.90e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.60e-08,2;UBERON:0002173,3.60e-08,2;UBERON:0002186,3.60e-08,2;UBERON:0005090,3.74e-08,2;UBERON:0001630,3.74e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0.919421224478927,0,0,0.0774672005803016,0,0.293600439334847,0,0,0.651032612147555,0.223915474239924,0.32389366601898,0.257575567634187,0.290796477559129,0,0.485168122375632,0.464858073811369,0.411167888021826,0,0.28769239232215,0.512321413058201,0,1.03423704220986,0,0,0,0.818718450173537,0.224723484445085,0,0,0.639337125799041,0.329851300186716,0,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0.209658645508376,0,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616804496998528,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,1.25849830862972,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0,0.898117490504679,1.35133776579987,0,0,0.183201743930407,0,0,0.436094052142534,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,1.1409436430889,0,0,0,0,0,0.122834317311768,0,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0,0,0,0,1.80285670687916,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.504641701751257,0,0,0,0,0,0.721879481669586,0.118306800039844,0.337169380156203,0,0.220587945464788,0,0.237270619111097,0.674156540800822,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.129271715757778,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,1.00451418286425,0,0,0,1.42636905040718,0,0,0,0.448340575974109,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0.713715955188647,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0.343143423810856,0.206768026122887,0,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.183138929636687,0.247528499761764,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0.384380134730212,0.127612712494584,0.6069466851333,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.563391205064483,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,1.96032172784825,0,0.144269212976445,0,0.318852545457645,0,0,0,0,0,0.228234679033192,0,0,0,0,0,1.27753871307098,0,0,0,0.500547425135725,0.781552381608161,1.9488432172667,0,0,0.33307196799782,4.22961015263549,1.30998378285754,0,0.485442086998054,0,1.13654458722565,0,0.296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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:53873430..53873439,+ | |||
|id=chr12:53873430..53873439,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000054;2.31e-08;2!CL:0000137;2.31e-08;2!CL:0000092;2.31e-08;2!CL:0002097;5.90e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.11e-08,2;CL:0000137,1.11e-08,2;CL:0000092,1.11e-08,2;CL:0002097,3.74e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.20e-29!235;DOID:14566!1.63e-27!239;DOID:0050687!9.09e-26!143;DOID:305!2.10e-13!106;DOID:0050686!5.09e-10!137;DOID:3095!1.76e-09!22;DOID:2994!1.76e-09!22;DOID:1115!1.60e-08!20 | |||
|ontology_enrichment_disease_v019=DOID:1192;1.68e-11;3!DOID:201;4.90e-10;6!DOID:0060100;4.90e-10;6!DOID:200;2.31e-08;2!DOID:3193;2.31e-08;2!DOID:4305;2.31e-08;2!DOID:3910;2.31e-08;2!DOID:962;2.31e-08;2!DOID:1115;3.20e-08;20!DOID:154;5.90e-08;2!DOID:4236;5.90e-08;2!DOID:3908;2.67e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.56e-18,143;DOID:162,2.52e-17,235;DOID:14566,9.23e-17,239;DOID:1192,3.67e-12,3;DOID:201,2.73e-10,6;DOID:0060100,2.73e-10,6;DOID:3193,1.03e-08,2;DOID:962,1.03e-08,2;DOID:200,1.11e-08,2;DOID:4305,1.11e-08,2;DOID:0050686,2.44e-08,137;DOID:1115,3.11e-08,20;DOID:3910,3.60e-08,2;DOID:154,1.01e-07,2;DOID:4236,1.01e-07,2;DOID:305,1.27e-07,106;DOID:3908,3.86e-07,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.31e-08;2!UBERON:0002173;2.31e-08;2!UBERON:0002186;2.31e-08;2!UBERON:0005090;5.90e-08;2!UBERON:0001630;5.90e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.60e-08,2;UBERON:0002173,3.60e-08,2;UBERON:0002186,3.60e-08,2;UBERON:0005090,3.74e-08,2;UBERON:0001630,3.74e-08,2 | |||
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| |||
|short_description=p@chr12:53873430..53873439,+ | |||
}} |
Revision as of 23:18, 10 September 2013
Short description: | p@chr12:53873430..53873439, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:53873430..53873439, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.11e-08 | 2 |
osteocyte | 1.11e-08 | 2 |
osteoclast | 1.11e-08 | 2 |
cortical cell of adrenal gland | 3.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.60e-08 | 2 |
alveolar duct | 3.60e-08 | 2 |
bronchiole | 3.60e-08 | 2 |
muscle structure | 3.74e-08 | 2 |
muscle organ | 3.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.56e-18 | 143 |
cancer | 2.52e-17 | 235 |
disease of cellular proliferation | 9.23e-17 | 239 |
peripheral nervous system neoplasm | 3.67e-12 | 3 |
connective tissue cancer | 2.73e-10 | 6 |
musculoskeletal system cancer | 2.73e-10 | 6 |
peripheral nerve sheath neoplasm | 1.03e-08 | 2 |
neurofibroma | 1.03e-08 | 2 |
giant cell tumor | 1.11e-08 | 2 |
bone giant cell tumor | 1.11e-08 | 2 |
organ system cancer | 2.44e-08 | 137 |
sarcoma | 3.11e-08 | 20 |
lung adenocarcinoma | 3.60e-08 | 2 |
mixed cell type cancer | 1.01e-07 | 2 |
carcinosarcoma | 1.01e-07 | 2 |
carcinoma | 1.27e-07 | 106 |
non-small cell lung carcinoma | 3.86e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.