FFCP PHASE1:Hg19::chr12:54366949..54366973,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3227|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5123|TSSclassifier=S|UniProt=O43248|association_with_transcript=37bp_to_ENST00000243082_5end|coexpression_cluster_id=C1676|description=CAGE_peak_3_at_HOXC11_5end|id=chr12:54366949..54366973,+|ontology_enrichment_celltype=CL:0002594!2.79e-07!4;CL:0000188!4.63e-07!9|ontology_enrichment_celltype_v019=CL:0002594;6.98e-14;4!CL:0000317;1.93e-07;2!CL:1000448;1.93e-07;2!CL:0002308;1.93e-07;2!CL:0002140;1.93e-07;2|ontology_enrichment_celltype_v019_2=CL:0002594,3.50e-14,4;CL:0000317,1.76e-07,2;CL:1000448,1.76e-07,2;CL:0002308,1.76e-07,2;CL:0002140,1.76e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!1.80e-10!143|ontology_enrichment_disease_v019=DOID:171;1.16e-12;10|ontology_enrichment_disease_v019_2=DOID:0050687,6.77e-17,143;DOID:171,1.29e-12,10;DOID:305,5.21e-09,106;DOID:162,1.08e-08,235;DOID:14566,2.37e-08,239|ontology_enrichment_uberon=UBERON:0001737!2.04e-13!9;UBERON:0001557!8.48e-09!19;UBERON:0002199!1.74e-07!45;UBERON:0002416!1.74e-07!45;UBERON:0001310!2.79e-07!4;UBERON:0004905!3.99e-07!5;UBERON:0000982!3.99e-07!5;UBERON:0004770!3.99e-07!5|ontology_enrichment_uberon_v019=UBERON:0001737;1.72e-17;9!UBERON:0001557;1.72e-17;9!UBERON:0002346;2.31e-15;4!UBERON:0000923;2.31e-15;4!UBERON:0010316;2.31e-15;4!UBERON:0005291;2.31e-15;4!UBERON:0001310;6.98e-14;4!UBERON:0002050;2.74e-12;5!UBERON:0005423;2.74e-12;5!UBERON:0010260;3.59e-09;9!UBERON:0002419;1.93e-07;2!UBERON:0007771;1.93e-07;2!UBERON:0003297;1.93e-07;2!UBERON:0001821;1.93e-07;2!UBERON:0003487;1.93e-07;2!UBERON:0001820;1.93e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.74e-17,9;UBERON:0001310,3.50e-14,4;UBERON:0010260,2.96e-09,9;UBERON:0001557,9.35e-08,19;UBERON:0002419,1.76e-07,2;UBERON:0007771,1.76e-07,2;UBERON:0003297,1.76e-07,2;UBERON:0001821,1.76e-07,2;UBERON:0003487,1.76e-07,2;UBERON:0001820,1.76e-07,2;UBERON:0005089,1.76e-07,2;UBERON:0005088,1.76e-07,2|phase1_expression=0,0,0,1.0007329835313,0,0,2.53299878168311,0.631719873426831,0.783556884599516,0,0,0,0,0.990130823680373,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.579386075843295,1.5905718941022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34503812496621,0.939475989150119,0.647491777472526,0.842704840213491,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772921620136887,0.37223371266318,0.675105328965065,0.292311015483596,0,0,0,0,0,2.03472710772585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60274960087657,1.85443159085912,2.41011029883482,1.21323370005633,1.30727666455444,3.55905928666645,0.808987848960987,0.784885860501384,1.15424147083917,0,0,0,0,0,0,0,0,0.122988438543114,0,0,1.1240175325762,1.70899253099772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,0,0.531876233169741,0,0.514414748524284,0,0.799266537048298,0,0,0.823240336780769,0.65147236858747,0,0.791951872933429,0,0,0,0,0,0,0,0,5.70547620162874,0,6.1642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0,0,0,0,0,0,2.0694614258501,1.32845119707087,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.348631135379878,0,0,0,0,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,1.30012049207304,0,2.41676795730305,0,0,0.137836572484531,0.107420244868274,1.74020032697074,0.170453254832202,1.69160867728801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02910376962704,3.40805847909725,1.97186921772569,1.14729081763241,0.687743287091848,1.78335525740625,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0.146508179271894,0,0,1.42068073403207,0,0,0,0,0,0,0,5.70038601945582,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,10.4077399995473,0,0.1137934482855,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,1.85195387982283,0.139423744278603,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,7.14082511148901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881931576729399,0,0,0,4.74106023316517,8.25909283073897,3.12038736802195,0,0,0,0,0,0,2.15106521008283,0,0,0.19980960958213,1.44090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25068989402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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5123 | |||
|TSSclassifier=S | |||
|UniProt=O43248 | |||
|association_with_transcript=37bp_to_ENST00000243082_5end | |||
|coexpression_cluster_id=C1676 | |||
|description=CAGE_peak_3_at_HOXC11_5end | |||
|id=chr12:54366949..54366973,+ | |||
|ontology_enrichment_celltype=CL:0002594!2.79e-07!4;CL:0000188!4.63e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002594;6.98e-14;4!CL:0000317;1.93e-07;2!CL:1000448;1.93e-07;2!CL:0002308;1.93e-07;2!CL:0002140;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,3.50e-14,4;CL:0000317,1.76e-07,2;CL:1000448,1.76e-07,2;CL:0002308,1.76e-07,2;CL:0002140,1.76e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.80e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:171;1.16e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.77e-17,143;DOID:171,1.29e-12,10;DOID:305,5.21e-09,106;DOID:162,1.08e-08,235;DOID:14566,2.37e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.04e-13!9;UBERON:0001557!8.48e-09!19;UBERON:0002199!1.74e-07!45;UBERON:0002416!1.74e-07!45;UBERON:0001310!2.79e-07!4;UBERON:0004905!3.99e-07!5;UBERON:0000982!3.99e-07!5;UBERON:0004770!3.99e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.72e-17;9!UBERON:0001557;1.72e-17;9!UBERON:0002346;2.31e-15;4!UBERON:0000923;2.31e-15;4!UBERON:0010316;2.31e-15;4!UBERON:0005291;2.31e-15;4!UBERON:0001310;6.98e-14;4!UBERON:0002050;2.74e-12;5!UBERON:0005423;2.74e-12;5!UBERON:0010260;3.59e-09;9!UBERON:0002419;1.93e-07;2!UBERON:0007771;1.93e-07;2!UBERON:0003297;1.93e-07;2!UBERON:0001821;1.93e-07;2!UBERON:0003487;1.93e-07;2!UBERON:0001820;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.74e-17,9;UBERON:0001310,3.50e-14,4;UBERON:0010260,2.96e-09,9;UBERON:0001557,9.35e-08,19;UBERON:0002419,1.76e-07,2;UBERON:0007771,1.76e-07,2;UBERON:0003297,1.76e-07,2;UBERON:0001821,1.76e-07,2;UBERON:0003487,1.76e-07,2;UBERON:0001820,1.76e-07,2;UBERON:0005089,1.76e-07,2;UBERON:0005088,1.76e-07,2 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,2.53299878168311,0.631719873426831,0.783556884599516,0,0,0,0,0.990130823680373,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.579386075843295,1.5905718941022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34503812496621,0.939475989150119,0.647491777472526,0.842704840213491,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772921620136887,0.37223371266318,0.675105328965065,0.292311015483596,0,0,0,0,0,2.03472710772585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60274960087657,1.85443159085912,2.41011029883482,1.21323370005633,1.30727666455444,3.55905928666645,0.808987848960987,0.784885860501384,1.15424147083917,0,0,0,0,0,0,0,0,0.122988438543114,0,0,1.1240175325762,1.70899253099772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,0,0.531876233169741,0,0.514414748524284,0,0.799266537048298,0,0,0.823240336780769,0.65147236858747,0,0.791951872933429,0,0,0,0,0,0,0,0,5.70547620162874,0,6.1642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0,0,0,0,0,0,2.0694614258501,1.32845119707087,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.348631135379878,0,0,0,0,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,1.30012049207304,0,2.41676795730305,0,0,0.137836572484531,0.107420244868274,1.74020032697074,0.170453254832202,1.69160867728801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02910376962704,3.40805847909725,1.97186921772569,1.14729081763241,0.687743287091848,1.78335525740625,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38871292465715,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0.146508179271894,0,0,1.42068073403207,0,0,0,0,0,0,0,5.70038601945582,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,10.4077399995473,0,0.1137934482855,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,1.85195387982283,0.139423744278603,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,7.14082511148901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881931576729399,0,0,0,4.74106023316517,8.25909283073897,3.12038736802195,0,0,0,0,0,0,2.15106521008283,0,0,0.19980960958213,1.44090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.83927341015997,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,1.0062716070103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0.800055529326307,1.03018711554838,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0.537266523244462,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,1.96565909307848,0,1.05656061679314,0,0,0,0.567515953566836,0,0,0,0,0,0,0,3.22491806912648,16.5808437679313,6.94040279850412,6.70373901567893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.733714394086716,0.808679663052368,0,0.690359926060101,1.19349733269765,0.0752103283492573,0,0,0,0,1.03499260351932,0,0,0,0,0,0,0.496211178389294,7.91420599618293,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,6.44625975621715,0,0,0,0,0,6.27703696987876,5.73732298598512,0,0,0,0,0,0.236664001461131,0.255640214277473,0,0,0,0,0,3.53340841014875,0.731507549893617,0.647428837187895,0.410651227424988,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,1.17838273550813,0,0,0,0.679708458751268,0,0,0,0,0,0.320965466756673,0,0,0,12.9372680998411,0,0,0,1.48798007266701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@HOXC11 | |||
}} |
Revision as of 23:19, 10 September 2013
Short description: | p3@HOXC11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HOXC11_5end |
Coexpression cluster: | C1676_neuroectodermal_synovial_breast_anaplastic_epitheloid_rhabdomyosarcoma_neuroepithelioma |
Association with transcript: | 37bp_to_ENST00000243082_5end |
EntrezGene: | HOXC11 |
HGNC: | 5123 |
UniProt: | O43248 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 3.50e-14 | 4 |
sebum secreting cell | 1.76e-07 | 2 |
epithelial cell of sweat gland | 1.76e-07 | 2 |
epithelial cell of skin gland | 1.76e-07 | 2 |
acinar cell of sebaceous gland | 1.76e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.74e-17 | 9 |
umbilical artery | 3.50e-14 | 4 |
umbilical blood vessel | 2.96e-09 | 9 |
upper respiratory tract | 9.35e-08 | 19 |
skin gland | 1.76e-07 | 2 |
epidermis gland | 1.76e-07 | 2 |
gland of integumental system | 1.76e-07 | 2 |
sebaceous gland | 1.76e-07 | 2 |
skin sebaceous gland | 1.76e-07 | 2 |
sweat gland | 1.76e-07 | 2 |
sweat gland placode | 1.76e-07 | 2 |
sebaceous gland placode | 1.76e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.77e-17 | 143 |
neuroectodermal tumor | 1.29e-12 | 10 |
carcinoma | 5.21e-09 | 106 |
cancer | 1.08e-08 | 235 |
disease of cellular proliferation | 2.37e-08 | 239 |
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