FFCP PHASE1:Hg19::chr12:58145889..58145914,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1019|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1773|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000547853_5end|coexpression_cluster_id=C181|description=CAGE_peak_5_at_CDK4_5end|id=chr12:58145889..58145914,-|ontology_enrichment_celltype=CL:0000548!4.38e-08!679;CL:0000004!4.38e-08!679;CL:0000255!4.38e-08!679;CL:0000012!9.19e-08!682|ontology_enrichment_celltype_v019=CL:1000449;4.18e-09;15!CL:1000746;4.75e-09;7!CL:1000612;4.75e-09;7!CL:0000650;2.07e-08;2!CL:1000500;2.07e-08;2!CL:1000618;2.07e-08;2!CL:1001318;2.07e-08;2!CL:0002173;2.07e-08;2!CL:1000497;4.26e-08;17!CL:0002518;4.26e-08;17|ontology_enrichment_celltype_v019_2=CL:1000449,3.90e-09,15;CL:1000746,5.16e-09,7;CL:1000612,5.16e-09,7;CL:0000650,3.08e-08,2;CL:1000500,3.08e-08,2;CL:1000618,3.08e-08,2;CL:1001318,3.08e-08,2;CL:0002173,3.08e-08,2;CL:1000497,4.01e-08,17;CL:0002518,4.01e-08,17|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!1.38e-14!239;DOID:162!3.25e-13!235;DOID:0050687!2.26e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0006555;4.18e-09;15!UBERON:0004819;4.18e-09;15!UBERON:0001285;4.18e-09;15!UBERON:0007684;4.18e-09;15!UBERON:0000074;4.75e-09;7!UBERON:0001229;4.75e-09;7!UBERON:0003567;2.07e-08;2!UBERON:0003838;2.07e-08;2!UBERON:0003586;2.07e-08;2!UBERON:0005169;2.07e-08;2!UBERON:0002321;2.07e-08;2!UBERON:0005215;2.07e-08;2!UBERON:0002303;2.07e-08;2!UBERON:0002319;2.07e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0004211,3.90e-09,15;UBERON:0009773,3.90e-09,15;UBERON:0001231,3.90e-09,15;UBERON:0001285,3.90e-09,15;UBERON:0007684,3.90e-09,15;UBERON:0004208,3.90e-09,15;UBERON:0010532,5.16e-09,7;UBERON:0000074,5.16e-09,7;UBERON:0001229,5.16e-09,7;UBERON:0001230,5.16e-09,7;UBERON:0003220,5.16e-09,7;UBERON:0005749,5.16e-09,7;UBERON:0004199,5.16e-09,7;UBERON:0004209,5.16e-09,7;UBERON:0004198,5.16e-09,7;UBERON:0006555,1.34e-08,16;UBERON:0004819,1.34e-08,16;UBERON:0003567,3.08e-08,2;UBERON:0003838,3.08e-08,2;UBERON:0003586,3.08e-08,2;UBERON:0005169,3.08e-08,2;UBERON:0002321,3.08e-08,2;UBERON:0005215,3.08e-08,2;UBERON:0002303,3.08e-08,2;UBERON:0002319,3.08e-08,2;UBERON:0005103,5.37e-08,8;UBERON:0000083,5.37e-08,8;UBERON:0009201,5.37e-08,8;UBERON:0006553,5.37e-08,8;UBERON:0003074,5.37e-08,8;UBERON:0003060,5.37e-08,8;UBERON:0000080,3.34e-07,9;UBERON:0002120,3.34e-07,9;UBERON:0004875,3.34e-07,9;UBERON:0005721,3.34e-07,9;UBERON:0005754,3.34e-07,9;UBERON:0007297,3.34e-07,9|phase1_expression=0.363356758541113,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0.816002764977012,0.313454721478088,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0,1.83884244895785,0,0,0.387336002901508,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.805658634218294,0.760272105718513,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0.234321431833797,0.624320153660641,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0.194874010322397,0,0.276149695926898,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0.473227200159376,0.337169380156203,0.482022059766964,0.661763836394364,0.871517776369625,1.18635309555548,0.269662616320329,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0.651616610620649,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.925971025153221,0,0,0,0,0.234004265139238,0.148631162288728,0,0.335964256397719,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.22001485746285,0.775630294546667,0,0.845302752556,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,1.08524321078289,0,0,0,0,0.602878754119172,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0,0.521301686808497,0.195801157462741,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0.384417447767103,0,0,0,0,0,0.164254312027618,0,0.348631135379878,0,0.200506470303285,0.184161977871793,0.114814448164607,0,0.524497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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1019 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1773 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000547853_5end | |||
|coexpression_cluster_id=C181 | |||
|description=CAGE_peak_5_at_CDK4_5end | |||
|id=chr12:58145889..58145914,- | |||
|ontology_enrichment_celltype=CL:0000548!4.38e-08!679;CL:0000004!4.38e-08!679;CL:0000255!4.38e-08!679;CL:0000012!9.19e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.18e-09;15!CL:1000746;4.75e-09;7!CL:1000612;4.75e-09;7!CL:0000650;2.07e-08;2!CL:1000500;2.07e-08;2!CL:1000618;2.07e-08;2!CL:1001318;2.07e-08;2!CL:0002173;2.07e-08;2!CL:1000497;4.26e-08;17!CL:0002518;4.26e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,3.90e-09,15;CL:1000746,5.16e-09,7;CL:1000612,5.16e-09,7;CL:0000650,3.08e-08,2;CL:1000500,3.08e-08,2;CL:1000618,3.08e-08,2;CL:1001318,3.08e-08,2;CL:0002173,3.08e-08,2;CL:1000497,4.01e-08,17;CL:0002518,4.01e-08,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.38e-14!239;DOID:162!3.25e-13!235;DOID:0050687!2.26e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.18e-09;15!UBERON:0004819;4.18e-09;15!UBERON:0001285;4.18e-09;15!UBERON:0007684;4.18e-09;15!UBERON:0000074;4.75e-09;7!UBERON:0001229;4.75e-09;7!UBERON:0003567;2.07e-08;2!UBERON:0003838;2.07e-08;2!UBERON:0003586;2.07e-08;2!UBERON:0005169;2.07e-08;2!UBERON:0002321;2.07e-08;2!UBERON:0005215;2.07e-08;2!UBERON:0002303;2.07e-08;2!UBERON:0002319;2.07e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,3.90e-09,15;UBERON:0009773,3.90e-09,15;UBERON:0001231,3.90e-09,15;UBERON:0001285,3.90e-09,15;UBERON:0007684,3.90e-09,15;UBERON:0004208,3.90e-09,15;UBERON:0010532,5.16e-09,7;UBERON:0000074,5.16e-09,7;UBERON:0001229,5.16e-09,7;UBERON:0001230,5.16e-09,7;UBERON:0003220,5.16e-09,7;UBERON:0005749,5.16e-09,7;UBERON:0004199,5.16e-09,7;UBERON:0004209,5.16e-09,7;UBERON:0004198,5.16e-09,7;UBERON:0006555,1.34e-08,16;UBERON:0004819,1.34e-08,16;UBERON:0003567,3.08e-08,2;UBERON:0003838,3.08e-08,2;UBERON:0003586,3.08e-08,2;UBERON:0005169,3.08e-08,2;UBERON:0002321,3.08e-08,2;UBERON:0005215,3.08e-08,2;UBERON:0002303,3.08e-08,2;UBERON:0002319,3.08e-08,2;UBERON:0005103,5.37e-08,8;UBERON:0000083,5.37e-08,8;UBERON:0009201,5.37e-08,8;UBERON:0006553,5.37e-08,8;UBERON:0003074,5.37e-08,8;UBERON:0003060,5.37e-08,8;UBERON:0000080,3.34e-07,9;UBERON:0002120,3.34e-07,9;UBERON:0004875,3.34e-07,9;UBERON:0005721,3.34e-07,9;UBERON:0005754,3.34e-07,9;UBERON:0007297,3.34e-07,9 | |||
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| |||
|short_description=p5@CDK4 | |||
}} |
Revision as of 23:45, 10 September 2013
Short description: | p5@CDK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CDK4_5end |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | 0bp_to_ENST00000547853_5end |
EntrezGene: | CDK4 |
HGNC: | 1773 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 3.90e-09 | 15 |
glomerular cell | 5.16e-09 | 7 |
kidney corpuscule cell | 5.16e-09 | 7 |
mesangial cell | 3.08e-08 | 2 |
kidney interstitial cell | 3.08e-08 | 2 |
juxtaglomerular complex cell | 3.08e-08 | 2 |
renal interstitial pericyte | 3.08e-08 | 2 |
extraglomerular mesangial cell | 3.08e-08 | 2 |
kidney cell | 4.01e-08 | 17 |
kidney epithelial cell | 4.01e-08 | 17 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.