FFCP PHASE1:Hg19::chr12:71551652..71551663,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7103|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11855|TSSclassifier=S|UniProt=|association_with_transcript=15bp_to_ENST00000546561_5end|description=CAGE_peak_10_at_TSPAN8_5end|id=chr12:71551652..71551663,-|ontology_enrichment_celltype=CL:1000306!1.35e-14!4;CL:0002547!1.35e-14!4;CL:0000359!1.96e-11!32;CL:0002592!2.05e-11!3;CL:0002150!5.28e-11!3;CL:0000861!5.28e-11!3;CL:0000192!3.64e-08!42;CL:0000514!3.64e-08!42;CL:0002595!1.83e-07!5|ontology_enrichment_celltype_v019=CL:0002595;1.27e-14;5!CL:0000359;1.39e-10;32!CL:0002553;5.31e-09;1!CL:0002591;9.53e-09;1!CL:1000306;1.80e-08;4!CL:0002547;1.80e-08;4!CL:0000192;2.60e-07;43|ontology_enrichment_celltype_v019_2=CL:0002595,1.00e-14,5;CL:0000359,4.96e-11,32;CL:0002553,6.22e-09,1;CL:0002591,9.91e-09,1;CL:1000306,1.70e-08,4;CL:0002547,1.70e-08,4;CL:0000192,5.26e-08,43;CL:0000514,5.26e-08,43|ontology_enrichment_development_v019=UBERON:0001045;9.53e-09;1!UBERON:0006242;9.53e-09;1!CL:0000514;2.60e-07;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001637!1.49e-20!42;UBERON:0003509!1.49e-20!42;UBERON:0004572!1.49e-20!42;UBERON:0004573!3.36e-18!33;UBERON:0004571!3.36e-18!33;UBERON:0003498!6.84e-18!5;UBERON:0005985!6.84e-18!5;UBERON:0001981!8.24e-15!60;UBERON:0007500!8.24e-15!60;UBERON:0004537!8.24e-15!60;UBERON:0006965!8.24e-15!60;UBERON:0000415!1.35e-14!4;UBERON:0007240!1.35e-14!4;UBERON:0005742!1.35e-14!4;UBERON:0005734!1.35e-14!4;UBERON:0004664!1.35e-14!4;UBERON:0004663!1.35e-14!4;UBERON:0000160!4.59e-14!27;UBERON:0005409!1.79e-12!35;UBERON:0000055!2.62e-12!69;UBERON:0004872!6.64e-12!84;UBERON:0000059!9.45e-12!11;UBERON:0001621!2.05e-11!3;UBERON:0001155!2.74e-10!9;UBERON:0000060!2.88e-10!12;UBERON:0002049!3.28e-10!79;UBERON:0007798!3.28e-10!79;UBERON:0003914!5.02e-10!118;UBERON:0007497!3.45e-08!2;UBERON:0003643!3.45e-08!2;UBERON:0003504!3.45e-08!2;UBERON:0003469!3.45e-08!2;UBERON:0003496!3.45e-08!2;UBERON:0004797!3.45e-08!2;UBERON:0002012!3.45e-08!2;UBERON:0008886!3.45e-08!2;UBERON:0007303!3.45e-08!2;UBERON:0002061!3.45e-08!2;UBERON:0005432!3.45e-08!2;UBERON:0004363!3.45e-08!2;UBERON:0004535!5.44e-08!110;UBERON:0000490!8.60e-08!138;UBERON:0001009!1.17e-07!113;UBERON:0003834!1.83e-07!5;UBERON:0001533!1.83e-07!5;UBERON:0000947!2.53e-07!21;UBERON:0010191!2.53e-07!21;UBERON:0004907!5.14e-07!5|ontology_enrichment_uberon_v019=UBERON:0000160;7.04e-34;17!UBERON:0005409;2.57e-32;22!UBERON:0004921;5.23e-18;33!UBERON:0000059;1.12e-17;11!UBERON:0002108;1.00e-14;4!UBERON:0003834;1.27e-14;5!UBERON:0001533;1.27e-14;5!UBERON:0001155;3.06e-14;9!UBERON:0004573;3.05e-12;33!UBERON:0004571;3.05e-12;33!UBERON:0001637;4.73e-12;42!UBERON:0003509;4.73e-12;42!UBERON:0004572;4.73e-12;42!UBERON:0003513;1.34e-10;7!UBERON:0001154;9.53e-09;1!UBERON:0001153;9.53e-09;1!UBERON:0009854;9.53e-09;1!UBERON:0004797;1.80e-08;4!UBERON:0000415;1.80e-08;4!UBERON:0007240;1.80e-08;4!UBERON:0005742;1.80e-08;4!UBERON:0005734;1.80e-08;4!UBERON:0004664;1.80e-08;4!UBERON:0004663;1.80e-08;4!UBERON:0004907;6.09e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.47e-34,17;UBERON:0005409,2.18e-28,25;UBERON:0000059,1.27e-17,11;UBERON:0002108,9.14e-15,4;UBERON:0003834,1.00e-14,5;UBERON:0001533,1.00e-14,5;UBERON:0001155,3.12e-14,9;UBERON:0004573,7.17e-14,33;UBERON:0004571,7.17e-14,33;UBERON:0001637,1.98e-13,42;UBERON:0003509,1.98e-13,42;UBERON:0004572,1.98e-13,42;UBERON:0003513,1.14e-10,7;UBERON:0007500,3.57e-09,59;UBERON:0001981,3.57e-09,59;UBERON:0004537,3.57e-09,59;UBERON:0006965,3.57e-09,59;UBERON:0001154,9.17e-09,1;UBERON:0001153,9.17e-09,1;UBERON:0001045,9.17e-09,1;UBERON:0004921,1.22e-08,118;UBERON:0000415,1.70e-08,4;UBERON:0007240,1.70e-08,4;UBERON:0005742,1.70e-08,4;UBERON:0005734,1.70e-08,4;UBERON:0004664,1.70e-08,4;UBERON:0004663,1.70e-08,4;UBERON:0001007,8.73e-08,145;UBERON:0001555,8.73e-08,145;UBERON:0007026,8.73e-08,145;UBERON:0000055,8.78e-08,68;UBERON:0003498,4.04e-07,5;UBERON:0005985,4.04e-07,5;UBERON:0004907,6.56e-07,5;UBERON:0004119,7.95e-07,160;UBERON:0000925,7.95e-07,160;UBERON:0006595,7.95e-07,160|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,1.01304409331664,0.397227542439656,2.86836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907457465280168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90344505006945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7103 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11855 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENST00000546561_5end | |||
|description=CAGE_peak_10_at_TSPAN8_5end | |||
|id=chr12:71551652..71551663,- | |||
|ontology_enrichment_celltype=CL:1000306!1.35e-14!4;CL:0002547!1.35e-14!4;CL:0000359!1.96e-11!32;CL:0002592!2.05e-11!3;CL:0002150!5.28e-11!3;CL:0000861!5.28e-11!3;CL:0000192!3.64e-08!42;CL:0000514!3.64e-08!42;CL:0002595!1.83e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002595;1.27e-14;5!CL:0000359;1.39e-10;32!CL:0002553;5.31e-09;1!CL:0002591;9.53e-09;1!CL:1000306;1.80e-08;4!CL:0002547;1.80e-08;4!CL:0000192;2.60e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.00e-14,5;CL:0000359,4.96e-11,32;CL:0002553,6.22e-09,1;CL:0002591,9.91e-09,1;CL:1000306,1.70e-08,4;CL:0002547,1.70e-08,4;CL:0000192,5.26e-08,43;CL:0000514,5.26e-08,43 | |||
|ontology_enrichment_development_v019=UBERON:0001045;9.53e-09;1!UBERON:0006242;9.53e-09;1!CL:0000514;2.60e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.49e-20!42;UBERON:0003509!1.49e-20!42;UBERON:0004572!1.49e-20!42;UBERON:0004573!3.36e-18!33;UBERON:0004571!3.36e-18!33;UBERON:0003498!6.84e-18!5;UBERON:0005985!6.84e-18!5;UBERON:0001981!8.24e-15!60;UBERON:0007500!8.24e-15!60;UBERON:0004537!8.24e-15!60;UBERON:0006965!8.24e-15!60;UBERON:0000415!1.35e-14!4;UBERON:0007240!1.35e-14!4;UBERON:0005742!1.35e-14!4;UBERON:0005734!1.35e-14!4;UBERON:0004664!1.35e-14!4;UBERON:0004663!1.35e-14!4;UBERON:0000160!4.59e-14!27;UBERON:0005409!1.79e-12!35;UBERON:0000055!2.62e-12!69;UBERON:0004872!6.64e-12!84;UBERON:0000059!9.45e-12!11;UBERON:0001621!2.05e-11!3;UBERON:0001155!2.74e-10!9;UBERON:0000060!2.88e-10!12;UBERON:0002049!3.28e-10!79;UBERON:0007798!3.28e-10!79;UBERON:0003914!5.02e-10!118;UBERON:0007497!3.45e-08!2;UBERON:0003643!3.45e-08!2;UBERON:0003504!3.45e-08!2;UBERON:0003469!3.45e-08!2;UBERON:0003496!3.45e-08!2;UBERON:0004797!3.45e-08!2;UBERON:0002012!3.45e-08!2;UBERON:0008886!3.45e-08!2;UBERON:0007303!3.45e-08!2;UBERON:0002061!3.45e-08!2;UBERON:0005432!3.45e-08!2;UBERON:0004363!3.45e-08!2;UBERON:0004535!5.44e-08!110;UBERON:0000490!8.60e-08!138;UBERON:0001009!1.17e-07!113;UBERON:0003834!1.83e-07!5;UBERON:0001533!1.83e-07!5;UBERON:0000947!2.53e-07!21;UBERON:0010191!2.53e-07!21;UBERON:0004907!5.14e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.04e-34;17!UBERON:0005409;2.57e-32;22!UBERON:0004921;5.23e-18;33!UBERON:0000059;1.12e-17;11!UBERON:0002108;1.00e-14;4!UBERON:0003834;1.27e-14;5!UBERON:0001533;1.27e-14;5!UBERON:0001155;3.06e-14;9!UBERON:0004573;3.05e-12;33!UBERON:0004571;3.05e-12;33!UBERON:0001637;4.73e-12;42!UBERON:0003509;4.73e-12;42!UBERON:0004572;4.73e-12;42!UBERON:0003513;1.34e-10;7!UBERON:0001154;9.53e-09;1!UBERON:0001153;9.53e-09;1!UBERON:0009854;9.53e-09;1!UBERON:0004797;1.80e-08;4!UBERON:0000415;1.80e-08;4!UBERON:0007240;1.80e-08;4!UBERON:0005742;1.80e-08;4!UBERON:0005734;1.80e-08;4!UBERON:0004664;1.80e-08;4!UBERON:0004663;1.80e-08;4!UBERON:0004907;6.09e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.47e-34,17;UBERON:0005409,2.18e-28,25;UBERON:0000059,1.27e-17,11;UBERON:0002108,9.14e-15,4;UBERON:0003834,1.00e-14,5;UBERON:0001533,1.00e-14,5;UBERON:0001155,3.12e-14,9;UBERON:0004573,7.17e-14,33;UBERON:0004571,7.17e-14,33;UBERON:0001637,1.98e-13,42;UBERON:0003509,1.98e-13,42;UBERON:0004572,1.98e-13,42;UBERON:0003513,1.14e-10,7;UBERON:0007500,3.57e-09,59;UBERON:0001981,3.57e-09,59;UBERON:0004537,3.57e-09,59;UBERON:0006965,3.57e-09,59;UBERON:0001154,9.17e-09,1;UBERON:0001153,9.17e-09,1;UBERON:0001045,9.17e-09,1;UBERON:0004921,1.22e-08,118;UBERON:0000415,1.70e-08,4;UBERON:0007240,1.70e-08,4;UBERON:0005742,1.70e-08,4;UBERON:0005734,1.70e-08,4;UBERON:0004664,1.70e-08,4;UBERON:0004663,1.70e-08,4;UBERON:0001007,8.73e-08,145;UBERON:0001555,8.73e-08,145;UBERON:0007026,8.73e-08,145;UBERON:0000055,8.78e-08,68;UBERON:0003498,4.04e-07,5;UBERON:0005985,4.04e-07,5;UBERON:0004907,6.56e-07,5;UBERON:0004119,7.95e-07,160;UBERON:0000925,7.95e-07,160;UBERON:0006595,7.95e-07,160 | |||
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|short_description=p10@TSPAN8 | |||
}} |
Revision as of 00:20, 11 September 2013
Short description: | p10@TSPAN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_TSPAN8_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000546561_5end |
EntrezGene: | TSPAN8 |
HGNC: | 11855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.00e-14 | 5 |
vascular associated smooth muscle cell | 4.96e-11 | 32 |
lung fibroblast | 6.22e-09 | 1 |
smooth muscle cell of the pulmonary artery | 9.91e-09 | 1 |
fibroblast of tunica adventitia of artery | 1.70e-08 | 4 |
fibroblast of the aortic adventitia | 1.70e-08 | 4 |
smooth muscle cell | 5.26e-08 | 43 |
smooth muscle myoblast | 5.26e-08 | 43 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.