FFCP PHASE1:Hg19::chr12:80838009..80838023,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9679|TSSclassifier=S|UniProt=|association_with_transcript=61bp_to_ENST00000526956_5end|coexpression_cluster_id=C161|description=CAGE_peak_3_at_PTPRQ_5end|id=chr12:80838009..80838023,+|ontology_enrichment_celltype=CL:0000077!1.71e-12!19|ontology_enrichment_celltype_v019=CL:0002541;9.77e-12;3!CL:0000222;2.93e-09;1!CL:1000306;1.83e-08;4!CL:0002547;1.83e-08;4!CL:0000077;8.09e-07;19|ontology_enrichment_celltype_v019_2=CL:0002541,9.78e-12,3;CL:1000306,2.58e-08,4;CL:0002547,2.58e-08,4;CL:0000077,8.68e-07,19|ontology_enrichment_development_v019=UBERON:0003124;7.26e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;1.74e-09;1!DOID:4549;1.74e-09;1!DOID:5861;1.74e-09;1!DOID:6496;1.74e-09;1|ontology_enrichment_disease_v019_2=DOID:3371,1.74e-09,1;DOID:4549,1.74e-09,1;DOID:5861,1.74e-09,1;DOID:6496,1.74e-09,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003124;9.77e-12;3!UBERON:0000920;9.77e-12;3!UBERON:0002369;2.04e-11;3!UBERON:0001235;2.04e-11;3!UBERON:0006858;2.04e-11;3!UBERON:0005383;3.69e-11;3!UBERON:0005382;3.69e-11;3!UBERON:0001874;4.03e-09;1!UBERON:0007195;7.26e-09;1!UBERON:0002426;7.26e-09;1!UBERON:0003831;7.26e-09;1!UBERON:0003898;7.26e-09;1!UBERON:0004830;7.26e-09;1!UBERON:0003830;7.26e-09;1!UBERON:0005175;7.26e-09;1!UBERON:0001774;7.26e-09;1!UBERON:0001103;7.26e-09;1!UBERON:0000369;1.38e-08;4!UBERON:0002435;1.38e-08;4!UBERON:0000204;1.38e-08;4!UBERON:0004797;1.83e-08;4!UBERON:0000415;1.83e-08;4!UBERON:0007240;1.83e-08;4!UBERON:0005742;1.83e-08;4!UBERON:0005734;1.83e-08;4!UBERON:0004664;1.83e-08;4!UBERON:0004663;1.83e-08;4!UBERON:0005631;9.41e-08;10!UBERON:0000158;9.41e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.78e-12,3;UBERON:0002369,2.26e-11,3;UBERON:0001235,2.26e-11,3;UBERON:0006858,2.26e-11,3;UBERON:0005383,3.60e-11,3;UBERON:0005382,3.60e-11,3;UBERON:0003124,9.67e-11,7;UBERON:0005631,3.26e-09,14;UBERON:0000158,3.26e-09,14;UBERON:0001874,4.19e-09,1;UBERON:0002426,5.75e-09,1;UBERON:0003831,5.75e-09,1;UBERON:0003898,5.75e-09,1;UBERON:0004830,5.75e-09,1;UBERON:0003830,5.75e-09,1;UBERON:0005175,5.75e-09,1;UBERON:0001774,5.75e-09,1;UBERON:0001103,5.75e-09,1;UBERON:0010084,5.75e-09,1;UBERON:0007195,9.91e-09,1;UBERON:0000369,1.35e-08,4;UBERON:0002435,1.35e-08,4;UBERON:0000204,1.35e-08,4;UBERON:0010082,1.35e-08,4;UBERON:0000415,2.58e-08,4;UBERON:0007240,2.58e-08,4;UBERON:0005742,2.58e-08,4;UBERON:0005734,2.58e-08,4;UBERON:0004664,2.58e-08,4;UBERON:0004663,2.58e-08,4|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,1.05927344650575,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0.635795703478686,0,0.515262646192195,2.06112432036503,0.744467425326359,0,0,0.252433774244115,0.184099797284599,0.969876340912871,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.857867961948885,0.542621605391443,0,0,0,0,0.602878754119172,0.871533458600294,1.09970290300263,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,0,1.73472656537328,0.702848489956279,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0.869932992075073,0,0,0,0.632758849437452,1.33441135746677,0,0.42793898803392,0,0,0.359744915166629,0.54907405947211,0.471249609382746,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,1.21360521749513,0,0,3.10367830158997,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,3.05794557474494,0,1.11136990144637,0,0,0,0,0,0,0.455173793141999,0,0,0,0.291604613383254,0,0,1.4471572635049,0,0,0,0,0.653630781113941,0,0.0769502585037971,0,0,0,0,7.97502899329799,0.274792780205587,8.52855641629816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9679 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=61bp_to_ENST00000526956_5end | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_3_at_PTPRQ_5end | |||
|id=chr12:80838009..80838023,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.71e-12!19 | |||
|ontology_enrichment_celltype_v019=CL:0002541;9.77e-12;3!CL:0000222;2.93e-09;1!CL:1000306;1.83e-08;4!CL:0002547;1.83e-08;4!CL:0000077;8.09e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.78e-12,3;CL:1000306,2.58e-08,4;CL:0002547,2.58e-08,4;CL:0000077,8.68e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.26e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.74e-09;1!DOID:4549;1.74e-09;1!DOID:5861;1.74e-09;1!DOID:6496;1.74e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.74e-09,1;DOID:4549,1.74e-09,1;DOID:5861,1.74e-09,1;DOID:6496,1.74e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.77e-12;3!UBERON:0000920;9.77e-12;3!UBERON:0002369;2.04e-11;3!UBERON:0001235;2.04e-11;3!UBERON:0006858;2.04e-11;3!UBERON:0005383;3.69e-11;3!UBERON:0005382;3.69e-11;3!UBERON:0001874;4.03e-09;1!UBERON:0007195;7.26e-09;1!UBERON:0002426;7.26e-09;1!UBERON:0003831;7.26e-09;1!UBERON:0003898;7.26e-09;1!UBERON:0004830;7.26e-09;1!UBERON:0003830;7.26e-09;1!UBERON:0005175;7.26e-09;1!UBERON:0001774;7.26e-09;1!UBERON:0001103;7.26e-09;1!UBERON:0000369;1.38e-08;4!UBERON:0002435;1.38e-08;4!UBERON:0000204;1.38e-08;4!UBERON:0004797;1.83e-08;4!UBERON:0000415;1.83e-08;4!UBERON:0007240;1.83e-08;4!UBERON:0005742;1.83e-08;4!UBERON:0005734;1.83e-08;4!UBERON:0004664;1.83e-08;4!UBERON:0004663;1.83e-08;4!UBERON:0005631;9.41e-08;10!UBERON:0000158;9.41e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.78e-12,3;UBERON:0002369,2.26e-11,3;UBERON:0001235,2.26e-11,3;UBERON:0006858,2.26e-11,3;UBERON:0005383,3.60e-11,3;UBERON:0005382,3.60e-11,3;UBERON:0003124,9.67e-11,7;UBERON:0005631,3.26e-09,14;UBERON:0000158,3.26e-09,14;UBERON:0001874,4.19e-09,1;UBERON:0002426,5.75e-09,1;UBERON:0003831,5.75e-09,1;UBERON:0003898,5.75e-09,1;UBERON:0004830,5.75e-09,1;UBERON:0003830,5.75e-09,1;UBERON:0005175,5.75e-09,1;UBERON:0001774,5.75e-09,1;UBERON:0001103,5.75e-09,1;UBERON:0010084,5.75e-09,1;UBERON:0007195,9.91e-09,1;UBERON:0000369,1.35e-08,4;UBERON:0002435,1.35e-08,4;UBERON:0000204,1.35e-08,4;UBERON:0010082,1.35e-08,4;UBERON:0000415,2.58e-08,4;UBERON:0007240,2.58e-08,4;UBERON:0005742,2.58e-08,4;UBERON:0005734,2.58e-08,4;UBERON:0004664,2.58e-08,4;UBERON:0004663,2.58e-08,4 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,1.05927344650575,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0.635795703478686,0,0.515262646192195,2.06112432036503,0.744467425326359,0,0,0.252433774244115,0.184099797284599,0.969876340912871,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0.857867961948885,0.542621605391443,0,0,0,0,0.602878754119172,0.871533458600294,1.09970290300263,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,0,1.73472656537328,0.702848489956279,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0.869932992075073,0,0,0,0.632758849437452,1.33441135746677,0,0.42793898803392,0,0,0.359744915166629,0.54907405947211,0.471249609382746,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,1.21360521749513,0,0,3.10367830158997,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,3.05794557474494,0,1.11136990144637,0,0,0,0,0,0,0.455173793141999,0,0,0,0.291604613383254,0,0,1.4471572635049,0,0,0,0,0.653630781113941,0,0.0769502585037971,0,0,0,0,7.97502899329799,0.274792780205587,8.52855641629816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0.193978032976839,9.97294231613953,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,1.87012214878023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0.5013797880454,0.919036730290385,0.655745261419609,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0.318593534327405,0,0,0,0,0,0.751288044986092,3.80805212168795,0.406870733204662,0,0.966695013382396,0,0,0.800055529326307,0,0.336749488765919,3.78554694685953,0.770479321629213,22.3019255029923,0,6.80117776536817,0.463044948647668,0.489473409012935,0,0.308801447160972,3.50854479325931,0.176689145945881,0.964570191354574,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.256916900385838,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,1.33438257845874,2.04250266890802,0,0,3.45484145949794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.714193294391221,0,0,0.112131862580613,0.445530107947154,0.404234377916439,0,0,0.0673520530145875,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0.813792356631477,0.665756774185513,0.201273793591026,0 | |||
|short_description=p3@PTPRQ | |||
}} |
Revision as of 00:38, 11 September 2013
Short description: | p3@PTPRQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PTPRQ_5end |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | 61bp_to_ENST00000526956_5end |
EntrezGene: | NA |
HGNC: | 9679 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.78e-12 | 3 |
fibroblast of tunica adventitia of artery | 2.58e-08 | 4 |
fibroblast of the aortic adventitia | 2.58e-08 | 4 |
mesothelial cell | 8.68e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.78e-12 | 3 |
adrenal gland | 2.26e-11 | 3 |
adrenal cortex | 2.26e-11 | 3 |
adrenal/interrenal gland | 2.26e-11 | 3 |
caudate-putamen | 3.60e-11 | 3 |
dorsal striatum | 3.60e-11 | 3 |
chorion | 9.67e-11 | 7 |
extraembryonic membrane | 3.26e-09 | 14 |
membranous layer | 3.26e-09 | 14 |
putamen | 4.19e-09 | 1 |
chest muscle | 5.75e-09 | 1 |
respiratory system muscle | 5.75e-09 | 1 |
skeletal muscle of trunk | 5.75e-09 | 1 |
respiratory system skeletal muscle | 5.75e-09 | 1 |
thoracic segment muscle | 5.75e-09 | 1 |
chest organ | 5.75e-09 | 1 |
muscle of trunk | 5.75e-09 | 1 |
diaphragm | 5.75e-09 | 1 |
future diaphragm | 5.75e-09 | 1 |
stroma of bone marrow | 9.91e-09 | 1 |
corpus striatum | 1.35e-08 | 4 |
striatum | 1.35e-08 | 4 |
ventral part of telencephalon | 1.35e-08 | 4 |
future corpus striatum | 1.35e-08 | 4 |
artery wall | 2.58e-08 | 4 |
tunica adventitia of artery | 2.58e-08 | 4 |
adventitia | 2.58e-08 | 4 |
tunica adventitia of blood vessel | 2.58e-08 | 4 |
aorta tunica adventitia | 2.58e-08 | 4 |
aorta wall | 2.58e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.74e-09 | 1 |
extraosseous chondrosarcoma | 1.74e-09 | 1 |
myxoid chondrosarcoma | 1.74e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 1.74e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.