FFCP PHASE1:Hg19::chr12:8850796..8850811,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57494|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29228|TSSclassifier=S|UniProt=|association_with_transcript=163bp_to_ENST00000299673_5end|description=CAGE_peak_8_at_RIMKLB_5end|id=chr12:8850796..8850811,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002322;6.43e-09;5!CL:0000039;9.78e-07;7!CL:0000586;9.78e-07;7|ontology_enrichment_celltype_v019_2=CL:0002322,6.44e-09,5;CL:0000039,8.61e-07,7;CL:0000586,8.61e-07,7|ontology_enrichment_development_v019=UBERON:0009117;1.11e-09;10!UBERON:0005564;1.11e-09;10|ontology_enrichment_disease=DOID:3095!1.88e-08!22;DOID:2994!1.88e-08!22|ontology_enrichment_disease_v019=DOID:3095;2.50e-11;22!DOID:2994;2.50e-11;22!DOID:4235;2.54e-11;1|ontology_enrichment_disease_v019_2=DOID:3095,2.34e-11,22;DOID:2994,2.34e-11,22;DOID:4235,5.43e-11,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.726713517082227,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0,0.487932798790507,0,0,0,0,0.547497700291537,0,0,0,0,0,0,0,0,0,0.369754010166788,0.154934401160603,0,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0,0.43917392846563,0.458426764241994,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0.550236083880135,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0.760272105718513,0.488124115096339,0.735326160691737,0,0.446498641420399,0,0.225222960966644,0,0,0.549605231791222,0,0,0,0,0.379891534993739,0.264818361626438,0.573673241497627,0,1.12135520028461,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0.843881661206331,0.68205903612839,0.757301322732344,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.272746120590835,0,1.21973706129595,1.19276791489337,0.929551542956147,0.518305275076852,0.756962552626885,1.82488679537915,0,0,0,0,0,0.473227200159376,0,0.241011029883482,0.330881918197182,0,0.474541238222193,0.269662616320329,0.392442930250692,1.92373578473195,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0.433099343283221,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0.12624243342638,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0.448524337381443,0,0.22001485746285,0.387815147273333,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0.128343036279748,0,2.60279707715243,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0.173767228936166,0.587403472388222,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0,0.177561725313127,0,1.03850885836724,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0.247528499761764,0,0.650060246036521,0,0.193341436584244,0.308097234229289,0.15350367472613,0.413509717453592,0.107420244868274,0.580066775656914,0.340906509664404,0.267096106940212,0,0,0.382838137483752,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0.715624433709956,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0.28853842595289,0,0,0,0,0,0.649243880549111,0,0,0,0,0.338583555603207,0,0,0,0.343505344755765,0,0,0,0.390776190804081,0,0,0,0.33307196799782,0,0,0.146508179271894,0.606802608747567,0,0,0,0.296964680832639,0,0.994147647766298,0.140669416410513,0,0,0.844501632511974,0.398495976502139,0.276283915531148,0,0.20453736500431,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0.969332746095218,0.185536196323703,1.99613798001194,0,0,0,0.227586896570999,0,0.472775363535873,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0.219385397153973,0.10893846351899,0.139423744278603,0.0769502585037971,0,0.23056390438806,0.718061155278177,0.108647371922008,0,0,0,0,0,0,0,0,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29228 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=163bp_to_ENST00000299673_5end | |||
|description=CAGE_peak_8_at_RIMKLB_5end | |||
|id=chr12:8850796..8850811,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.43e-09;5!CL:0000039;9.78e-07;7!CL:0000586;9.78e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.44e-09,5;CL:0000039,8.61e-07,7;CL:0000586,8.61e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.11e-09;10!UBERON:0005564;1.11e-09;10 | |||
|ontology_enrichment_disease=DOID:3095!1.88e-08!22;DOID:2994!1.88e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.50e-11;22!DOID:2994;2.50e-11;22!DOID:4235;2.54e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.34e-11,22;DOID:2994,2.34e-11,22;DOID:4235,5.43e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p8@RIMKLB | |||
}} |
Revision as of 00:47, 11 September 2013
Short description: | p8@RIMKLB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_RIMKLB_5end |
Coexpression cluster: | NA |
Association with transcript: | 163bp_to_ENST00000299673_5end |
EntrezGene: | RIMKLB |
HGNC: | 29228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.44e-09 | 5 |
germ line cell | 8.61e-07 | 7 |
germ cell | 8.61e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.34e-11 | 22 |
germ cell cancer | 2.34e-11 | 22 |
spindle cell sarcoma | 5.43e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.