FFCP PHASE1:Hg19::chr12:8927841..8927845,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:8927841..8927845,+|id=chr12:8927841..8927845,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000313;7.47e-30;1!CL:0000159;1.15e-15;2!CL:0002541;9.43e-11;3!CL:0000306;2.18e-08;4!CL:0002222;2.18e-08;4!CL:0002224;2.18e-08;4|ontology_enrichment_celltype_v019_2=CL:0000313,7.48e-30,1;CL:0000159,1.15e-15,2;CL:0002541,1.09e-10,3;CL:0000306,1.96e-08,4;CL:0002222,1.96e-08,4;CL:0002224,1.96e-08,4|ontology_enrichment_development_v019=UBERON:0004874;2.05e-29;1!UBERON:0009117;2.18e-12;10!UBERON:0005564;2.18e-12;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2152;7.47e-30;1|ontology_enrichment_disease_v019_2=DOID:2152,7.48e-30,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004911;7.47e-30;1!UBERON:0000989;2.05e-29;1!UBERON:0008811;2.05e-29;1!UBERON:0002021;1.61e-23;5!UBERON:0004909;1.15e-15;2!UBERON:0003135;2.83e-11;11!UBERON:0003124;9.43e-11;3!UBERON:0000920;9.43e-11;3!UBERON:0010077;2.18e-08;4!UBERON:0005389;2.18e-08;4!UBERON:0000484;2.18e-08;4!UBERON:0000965;2.18e-08;4!UBERON:0001803;2.18e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0004911,7.48e-30,1;UBERON:0000989,9.99e-30,1;UBERON:0008811,9.99e-30,1;UBERON:0006258,9.99e-30,1;UBERON:0005876,9.99e-30,1;UBERON:0004874,9.99e-30,1;UBERON:0002021,2.02e-23,5;UBERON:0004909,1.15e-15,2;UBERON:0003135,2.55e-11,11;UBERON:0000920,1.09e-10,3;UBERON:0010077,1.96e-08,4;UBERON:0005389,1.96e-08,4;UBERON:0000484,1.96e-08,4;UBERON:0002546,1.96e-08,4;UBERON:0000965,1.96e-08,4;UBERON:0001803,1.96e-08,4;UBERON:0003073,1.96e-08,4;UBERON:0005426,1.96e-08,4|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.444859689486181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0.232387885739037,0,0,0.72995471815166,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.441175890929576,0.435758888184812,0,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0,0,0,0,0,0.368323955743585,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.59873811429845,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0.20453736500431,0.123084805461069,0.311039587661807,0,0.358042349351218,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0.21787692703798,0.139423744278603,0.0769502585037971,0,0,0.538545866458633,0.651884231532048,0,0.0915975934018623,1.06606955203727,0,0,0,0,0.19606253431774,0,0.189753732724185,0,0.421996129056054,0.326465616318295,0,0,0.995261931078505,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0.61214552326098,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0.387025325156341,0.292357268344742,0.410577285266046,0,0,0,0,0,0.0633107959558787,0.586654148204409,0,0,0,0,0.229073192331831,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0.854183854313742,0,0,0.221858103073705,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0.761610424337591,0,0.181848659202559,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0.489473409012935,0,0.617602894321944,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0.436838552768056,0.169732529954025,0.425149840203366,0.123935764259002,0,0,0.47317047000752,0.80057074828547,0,0,0,1.41696576325585,0.159633859057151,0,1.00828678488687,0,0,0,0,0,0,0,0.762764190934334,0,0,0.150420656698515,0,0,0,0.49131575253029,0,0,0,0,0.0634158101939068,0.546974809018219,0,1.48863353516788,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.236387681767936,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0.170426809518315,0,0,0,0,2.57267493134922,0,0,0,0,0,0,0,0,0.237840181555137,0,0.219881033490858,0,0,0.218559560503957,0,0.490296643507811,0,0,0,0,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0,0,0.315543124386369,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0.101988829741982,0.26721740526556,0.275684698604535,1.25353769646188,0.0757786982182394,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0.0636471582781649,0.404234377916439,0,0,0,0,0,0,0.213454691755431,0,0.179650404213174,0,0,0.406896178315738,0,0,0|short_description=p@chr12:8927841..8927845,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:8927841..8927845,+ | |||
|id=chr12:8927841..8927845,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;7.47e-30;1!CL:0000159;1.15e-15;2!CL:0002541;9.43e-11;3!CL:0000306;2.18e-08;4!CL:0002222;2.18e-08;4!CL:0002224;2.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,7.48e-30,1;CL:0000159,1.15e-15,2;CL:0002541,1.09e-10,3;CL:0000306,1.96e-08,4;CL:0002222,1.96e-08,4;CL:0002224,1.96e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.05e-29;1!UBERON:0009117;2.18e-12;10!UBERON:0005564;2.18e-12;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;7.47e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,7.48e-30,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;7.47e-30;1!UBERON:0000989;2.05e-29;1!UBERON:0008811;2.05e-29;1!UBERON:0002021;1.61e-23;5!UBERON:0004909;1.15e-15;2!UBERON:0003135;2.83e-11;11!UBERON:0003124;9.43e-11;3!UBERON:0000920;9.43e-11;3!UBERON:0010077;2.18e-08;4!UBERON:0005389;2.18e-08;4!UBERON:0000484;2.18e-08;4!UBERON:0000965;2.18e-08;4!UBERON:0001803;2.18e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,7.48e-30,1;UBERON:0000989,9.99e-30,1;UBERON:0008811,9.99e-30,1;UBERON:0006258,9.99e-30,1;UBERON:0005876,9.99e-30,1;UBERON:0004874,9.99e-30,1;UBERON:0002021,2.02e-23,5;UBERON:0004909,1.15e-15,2;UBERON:0003135,2.55e-11,11;UBERON:0000920,1.09e-10,3;UBERON:0010077,1.96e-08,4;UBERON:0005389,1.96e-08,4;UBERON:0000484,1.96e-08,4;UBERON:0002546,1.96e-08,4;UBERON:0000965,1.96e-08,4;UBERON:0001803,1.96e-08,4;UBERON:0003073,1.96e-08,4;UBERON:0005426,1.96e-08,4 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.444859689486181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0,0,0,0.232387885739037,0,0,0.72995471815166,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.441175890929576,0.435758888184812,0,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0,0,0,0,0,0.368323955743585,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.59873811429845,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0.20453736500431,0.123084805461069,0.311039587661807,0,0.358042349351218,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0.21787692703798,0.139423744278603,0.0769502585037971,0,0,0.538545866458633,0.651884231532048,0,0.0915975934018623,1.06606955203727,0,0,0,0,0.19606253431774,0,0.189753732724185,0,0.421996129056054,0.326465616318295,0,0,0.995261931078505,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0.61214552326098,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0.343972064943233,0.387025325156341,0.292357268344742,0.410577285266046,0,0,0,0,0,0.0633107959558787,0.586654148204409,0,0,0,0,0.229073192331831,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0.854183854313742,0,0,0.221858103073705,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0.761610424337591,0,0.181848659202559,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0.489473409012935,0,0.617602894321944,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0.436838552768056,0.169732529954025,0.425149840203366,0.123935764259002,0,0,0.47317047000752,0.80057074828547,0,0,0,1.41696576325585,0.159633859057151,0,1.00828678488687,0,0,0,0,0,0,0,0.762764190934334,0,0,0.150420656698515,0,0,0,0.49131575253029,0,0,0,0,0.0634158101939068,0.546974809018219,0,1.48863353516788,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.236387681767936,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0.170426809518315,0,0,0,0,2.57267493134922,0,0,0,0,0,0,0,0,0.237840181555137,0,0.219881033490858,0,0,0.218559560503957,0,0.490296643507811,0,0,0,0,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0,0,0.315543124386369,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0.101988829741982,0.26721740526556,0.275684698604535,1.25353769646188,0.0757786982182394,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0.0636471582781649,0.404234377916439,0,0,0,0,0,0,0.213454691755431,0,0.179650404213174,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr12:8927841..8927845,+ | |||
}} |
Revision as of 00:48, 11 September 2013
Short description: | p@chr12:8927841..8927845, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:8927841..8927845, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 7.48e-30 | 1 |
seromucus secreting cell | 1.15e-15 | 2 |
chorionic membrane mesenchymal stem cell | 1.09e-10 | 3 |
crystallin accumulating cell | 1.96e-08 | 4 |
vertebrate lens cell | 1.96e-08 | 4 |
lens epithelial cell | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 7.48e-30 | 1 |
penis | 9.99e-30 | 1 |
intromittent organ | 9.99e-30 | 1 |
lateral plate mesenchyme | 9.99e-30 | 1 |
undifferentiated genital tubercle | 9.99e-30 | 1 |
somatopleure | 9.99e-30 | 1 |
occipital lobe | 2.02e-23 | 5 |
epithelium of gonad | 1.15e-15 | 2 |
male reproductive organ | 2.55e-11 | 11 |
egg chorion | 1.09e-10 | 3 |
cuboidal epithelium | 1.96e-08 | 4 |
transparent eye structure | 1.96e-08 | 4 |
simple cuboidal epithelium | 1.96e-08 | 4 |
cranial placode | 1.96e-08 | 4 |
lens of camera-type eye | 1.96e-08 | 4 |
epithelium of lens | 1.96e-08 | 4 |
lens placode | 1.96e-08 | 4 |
lens vesicle | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 7.48e-30 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.