FFCP PHASE1:Hg19::chr13:37005647..37005661,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8900|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1577|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc010teo.1_5end|description=CAGE_peak_9_at_CCNA1_5end|id=chr13:37005647..37005661,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000767;1.09e-10;3!CL:0002592;1.09e-10;3|ontology_enrichment_celltype_v019_2=CL:0002592,9.90e-11,3;CL:0000767,1.20e-10,3|ontology_enrichment_development_v019=UBERON:0009117;2.18e-12;10!UBERON:0005564;2.18e-12;10|ontology_enrichment_disease=DOID:8692!8.40e-10!31;DOID:1240!2.22e-07!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!8.26e-16!34;UBERON:0001869!1.43e-14!32;UBERON:0002791!4.73e-14!33;UBERON:0001049!1.21e-12!57;UBERON:0005068!1.21e-12!57;UBERON:0006241!1.21e-12!57;UBERON:0007135!1.21e-12!57;UBERON:0002780!1.22e-12!41;UBERON:0001890!1.22e-12!41;UBERON:0006240!1.22e-12!41;UBERON:0003080!2.85e-12!42;UBERON:0002616!4.33e-12!59;UBERON:0002020!1.62e-11!34;UBERON:0003528!1.62e-11!34;UBERON:0002346!4.11e-11!90;UBERON:0007023!6.65e-10!115;UBERON:0000955!1.29e-09!69;UBERON:0006238!1.29e-09!69;UBERON:0003075!2.47e-09!86;UBERON:0007284!2.47e-09!86;UBERON:0001950!3.73e-09!20;UBERON:0003056!7.86e-09!61;UBERON:0001017!1.19e-08!82;UBERON:0002619!3.03e-08!22;UBERON:0000369!3.32e-08!4;UBERON:0002435!3.32e-08!4;UBERON:0000204!3.32e-08!4;UBERON:0010082!3.32e-08!4;UBERON:0009663!3.86e-08!7;UBERON:0005743!4.46e-08!86;UBERON:0000073!6.35e-08!94;UBERON:0001016!6.35e-08!94;UBERON:0000956!3.81e-07!25;UBERON:0000203!3.81e-07!25|ontology_enrichment_uberon_v019=UBERON:0000473;3.17e-15;8!UBERON:0003135;2.36e-11;11!UBERON:0003498;1.09e-10;3!UBERON:0005985;1.09e-10;3!UBERON:0001621;1.09e-10;3|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.29e-15,8;UBERON:0003135,2.42e-11,11;UBERON:0001621,9.90e-11,3;UBERON:0003498,6.04e-07,5;UBERON:0005985,6.04e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0.324547393654683,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0.423347165447766,0,5.89674074038263,0,0.313359791546046,0,0,0.321176150207399,0.605399121573143,0,0,0.614481528616916,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0.157265941855896,0,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,2.8795905322931,5.89521086343593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@CCNA1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8900 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1577 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010teo.1_5end | |||
|description=CAGE_peak_9_at_CCNA1_5end | |||
|id=chr13:37005647..37005661,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000767;1.09e-10;3!CL:0002592;1.09e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,9.90e-11,3;CL:0000767,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.18e-12;10!UBERON:0005564;2.18e-12;10 | |||
|ontology_enrichment_disease=DOID:8692!8.40e-10!31;DOID:1240!2.22e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!8.26e-16!34;UBERON:0001869!1.43e-14!32;UBERON:0002791!4.73e-14!33;UBERON:0001049!1.21e-12!57;UBERON:0005068!1.21e-12!57;UBERON:0006241!1.21e-12!57;UBERON:0007135!1.21e-12!57;UBERON:0002780!1.22e-12!41;UBERON:0001890!1.22e-12!41;UBERON:0006240!1.22e-12!41;UBERON:0003080!2.85e-12!42;UBERON:0002616!4.33e-12!59;UBERON:0002020!1.62e-11!34;UBERON:0003528!1.62e-11!34;UBERON:0002346!4.11e-11!90;UBERON:0007023!6.65e-10!115;UBERON:0000955!1.29e-09!69;UBERON:0006238!1.29e-09!69;UBERON:0003075!2.47e-09!86;UBERON:0007284!2.47e-09!86;UBERON:0001950!3.73e-09!20;UBERON:0003056!7.86e-09!61;UBERON:0001017!1.19e-08!82;UBERON:0002619!3.03e-08!22;UBERON:0000369!3.32e-08!4;UBERON:0002435!3.32e-08!4;UBERON:0000204!3.32e-08!4;UBERON:0010082!3.32e-08!4;UBERON:0009663!3.86e-08!7;UBERON:0005743!4.46e-08!86;UBERON:0000073!6.35e-08!94;UBERON:0001016!6.35e-08!94;UBERON:0000956!3.81e-07!25;UBERON:0000203!3.81e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.17e-15;8!UBERON:0003135;2.36e-11;11!UBERON:0003498;1.09e-10;3!UBERON:0005985;1.09e-10;3!UBERON:0001621;1.09e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.29e-15,8;UBERON:0003135,2.42e-11,11;UBERON:0001621,9.90e-11,3;UBERON:0003498,6.04e-07,5;UBERON:0005985,6.04e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0.324547393654683,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0.423347165447766,0,5.89674074038263,0,0.313359791546046,0,0,0.321176150207399,0.605399121573143,0,0,0.614481528616916,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0.157265941855896,0,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,2.8795905322931,5.89521086343593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@CCNA1 | |||
}} |
Revision as of 02:08, 11 September 2013
Short description: | p9@CCNA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_CCNA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010teo.1_5end |
EntrezGene: | CCNA1 |
HGNC: | 1577 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 9.90e-11 | 3 |
basophil | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 3.29e-15 | 8 |
male reproductive organ | 2.42e-11 | 11 |
coronary artery | 9.90e-11 | 3 |
heart blood vessel | 6.04e-07 | 5 |
coronary vessel | 6.04e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.