FFCP PHASE1:Hg19::chr14:105391172..105391177,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=122618|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23792|TSSclassifier=S|UniProt=Q96BZ4|association_with_transcript=-9bp_to_NM_138790,uc001ypu.1,uc010tyl.1_5end|coexpression_cluster_id=C44|description=CAGE_peak_3_at_PLD4_5end|id=chr14:105391172..105391177,+|ontology_enrichment_celltype=CL:0000037!3.54e-25!172;CL:0000566!3.54e-25!172;CL:0000988!5.42e-23!182;CL:0002032!1.91e-20!165;CL:0000837!1.91e-20!165;CL:0000236!2.37e-19!14;CL:0000945!1.39e-16!24;CL:0000826!1.39e-16!24;CL:0000738!2.88e-14!140;CL:0002087!7.94e-14!119;CL:0000763!5.45e-13!112;CL:0000049!5.45e-13!112;CL:0002393!1.15e-10!9;CL:0002397!1.15e-10!9;CL:0002031!4.03e-10!124;CL:0000784!7.56e-09!3;CL:0000542!1.57e-07!53;CL:0000051!1.57e-07!53;CL:0000875!5.07e-07!3;CL:0002396!5.07e-07!3|ontology_enrichment_celltype_v019=CL:0000784;6.65e-39;3!CL:0000236;1.58e-23;13!CL:0002032;4.53e-14;1!CL:0000557;4.53e-14;1!CL:0000037;9.73e-14;1!CL:0001024;9.73e-14;1!CL:0000945;9.28e-13;24!CL:0000451;4.34e-11;10|ontology_enrichment_celltype_v019_2=CL:0000784,6.65e-39,3;CL:0000236,8.32e-22,14;CL:0000037,7.46e-15,168;CL:0000988,5.17e-14,177;CL:0001024,1.10e-13,1;CL:0000945,9.88e-13,24;CL:0000826,9.88e-13,24;CL:0000451,4.34e-11,10;CL:0000738,1.20e-09,136;CL:0002032,1.59e-09,161;CL:0000837,1.59e-09,161;CL:0002087,1.23e-07,115;CL:0002031,2.82e-07,120|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!7.26e-16!31;DOID:1240!2.41e-15!39;DOID:2531!6.82e-15!51;DOID:0060083!6.82e-15!51|ontology_enrichment_disease_v019=DOID:8692;2.60e-09;31|ontology_enrichment_disease_v019_2=DOID:8692,5.04e-10,31;DOID:1240,5.99e-08,39|ontology_enrichment_uberon=UBERON:0001049!7.73e-15!57;UBERON:0005068!7.73e-15!57;UBERON:0006241!7.73e-15!57;UBERON:0007135!7.73e-15!57;UBERON:0003080!5.34e-13!42;UBERON:0002616!1.09e-12!59;UBERON:0000955!4.08e-12!69;UBERON:0006238!4.08e-12!69;UBERON:0002780!9.20e-12!41;UBERON:0001890!9.20e-12!41;UBERON:0006240!9.20e-12!41;UBERON:0007023!2.35e-11!115;UBERON:0001017!2.38e-11!82;UBERON:0005743!1.58e-10!86;UBERON:0001893!9.04e-10!34;UBERON:0002298!2.71e-09!8;UBERON:0000073!6.07e-09!94;UBERON:0001016!6.07e-09!94;UBERON:0003075!8.83e-09!86;UBERON:0007284!8.83e-09!86;UBERON:0002791!1.10e-08!33;UBERON:0002020!2.72e-08!34;UBERON:0003528!2.72e-08!34;UBERON:0002346!3.89e-08!90;UBERON:0001869!1.18e-07!32;UBERON:0003056!1.30e-07!61;UBERON:0002390!5.02e-07!102;UBERON:0003061!5.02e-07!102|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.464448369948228,0,0,0,0,0.426507697462265,2.64240395401362,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0,0,0.570025487482497,0.19891667719909,0.182664153764634,0,1.09227722252426,3.55803701545422,1.28019066769952,0.800791974072025,0.574752439954483,2.64417949113945,0.954053754535364,1.1384259382189,0,0.764546456250458,0,0,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.664789802594326,13.3554749610991,22.307801520425,13.0010125465348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0,0,0,0,0,0,0,0.743212700502875,0.865615277858669,0,0,0.199579371432817,1.1490322207942,0.423347165447766,0.973865820823666,0.561594356226918,0.912938716132769,0,0,0.50787533340481,0,0.605399121573143,3.83261613921294,0,4.30137070031841,2.90778940260141,4.33807768450962,0.781552381608161,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741412462787447,0,0.468528891450678,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,5.10986352267889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.221858103073705,0.24838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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=122618 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23792 | |||
|TSSclassifier=S | |||
|UniProt=Q96BZ4 | |||
|association_with_transcript=-9bp_to_NM_138790,uc001ypu.1,uc010tyl.1_5end | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_3_at_PLD4_5end | |||
|id=chr14:105391172..105391177,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.54e-25!172;CL:0000566!3.54e-25!172;CL:0000988!5.42e-23!182;CL:0002032!1.91e-20!165;CL:0000837!1.91e-20!165;CL:0000236!2.37e-19!14;CL:0000945!1.39e-16!24;CL:0000826!1.39e-16!24;CL:0000738!2.88e-14!140;CL:0002087!7.94e-14!119;CL:0000763!5.45e-13!112;CL:0000049!5.45e-13!112;CL:0002393!1.15e-10!9;CL:0002397!1.15e-10!9;CL:0002031!4.03e-10!124;CL:0000784!7.56e-09!3;CL:0000542!1.57e-07!53;CL:0000051!1.57e-07!53;CL:0000875!5.07e-07!3;CL:0002396!5.07e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;6.65e-39;3!CL:0000236;1.58e-23;13!CL:0002032;4.53e-14;1!CL:0000557;4.53e-14;1!CL:0000037;9.73e-14;1!CL:0001024;9.73e-14;1!CL:0000945;9.28e-13;24!CL:0000451;4.34e-11;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.65e-39,3;CL:0000236,8.32e-22,14;CL:0000037,7.46e-15,168;CL:0000988,5.17e-14,177;CL:0001024,1.10e-13,1;CL:0000945,9.88e-13,24;CL:0000826,9.88e-13,24;CL:0000451,4.34e-11,10;CL:0000738,1.20e-09,136;CL:0002032,1.59e-09,161;CL:0000837,1.59e-09,161;CL:0002087,1.23e-07,115;CL:0002031,2.82e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!7.26e-16!31;DOID:1240!2.41e-15!39;DOID:2531!6.82e-15!51;DOID:0060083!6.82e-15!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.60e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.04e-10,31;DOID:1240,5.99e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.73e-15!57;UBERON:0005068!7.73e-15!57;UBERON:0006241!7.73e-15!57;UBERON:0007135!7.73e-15!57;UBERON:0003080!5.34e-13!42;UBERON:0002616!1.09e-12!59;UBERON:0000955!4.08e-12!69;UBERON:0006238!4.08e-12!69;UBERON:0002780!9.20e-12!41;UBERON:0001890!9.20e-12!41;UBERON:0006240!9.20e-12!41;UBERON:0007023!2.35e-11!115;UBERON:0001017!2.38e-11!82;UBERON:0005743!1.58e-10!86;UBERON:0001893!9.04e-10!34;UBERON:0002298!2.71e-09!8;UBERON:0000073!6.07e-09!94;UBERON:0001016!6.07e-09!94;UBERON:0003075!8.83e-09!86;UBERON:0007284!8.83e-09!86;UBERON:0002791!1.10e-08!33;UBERON:0002020!2.72e-08!34;UBERON:0003528!2.72e-08!34;UBERON:0002346!3.89e-08!90;UBERON:0001869!1.18e-07!32;UBERON:0003056!1.30e-07!61;UBERON:0002390!5.02e-07!102;UBERON:0003061!5.02e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.464448369948228,0,0,0,0,0.426507697462265,2.64240395401362,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0,0,0.570025487482497,0.19891667719909,0.182664153764634,0,1.09227722252426,3.55803701545422,1.28019066769952,0.800791974072025,0.574752439954483,2.64417949113945,0.954053754535364,1.1384259382189,0,0.764546456250458,0,0,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.664789802594326,13.3554749610991,22.307801520425,13.0010125465348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0,0,0,0,0,0,0,0.743212700502875,0.865615277858669,0,0,0.199579371432817,1.1490322207942,0.423347165447766,0.973865820823666,0.561594356226918,0.912938716132769,0,0,0.50787533340481,0,0.605399121573143,3.83261613921294,0,4.30137070031841,2.90778940260141,4.33807768450962,0.781552381608161,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741412462787447,0,0.468528891450678,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,5.10986352267889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0.594092800654172,0,0,0,0.128915775947154,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0,0.0620747142958579,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p3@PLD4 | |||
}} |
Revision as of 03:29, 11 September 2013
Short description: | p3@PLD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PLD4_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -9bp_to_NM_138790, uc001ypu.1, uc010tyl.1_5end |
EntrezGene: | PLD4 |
HGNC: | 23792 |
UniProt: | Q96BZ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.65e-39 | 3 |
B cell | 8.32e-22 | 14 |
hematopoietic stem cell | 7.46e-15 | 168 |
hematopoietic cell | 5.17e-14 | 177 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.10e-13 | 1 |
lymphocyte of B lineage | 9.88e-13 | 24 |
pro-B cell | 9.88e-13 | 24 |
dendritic cell | 4.34e-11 | 10 |
leukocyte | 1.20e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.59e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-09 | 161 |
nongranular leukocyte | 1.23e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.82e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.04e-10 | 31 |
leukemia | 5.99e-08 | 39 |
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