FFCP PHASE1:Hg19::chr14:106320631..106320646,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3507|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=5541|TSSclassifier=S|UniProt=|association_with_transcript=-130bp_to_J00258_5end|coexpression_cluster_id=C47|description=CAGE_peak_9_at_IGHM_5end|id=chr14:106320631..106320646,-|ontology_enrichment_celltype=CL:0000945!1.66e-66!24;CL:0000826!1.66e-66!24;CL:0000236!4.29e-38!14;CL:0000542!5.57e-33!53;CL:0000051!5.57e-33!53;CL:0000838!1.66e-30!52;CL:0002087!9.07e-14!119;CL:0000738!5.53e-12!140;CL:0000037!2.31e-11!172;CL:0000566!2.31e-11!172;CL:0002032!4.06e-11!165;CL:0000837!4.06e-11!165;CL:0002031!1.46e-10!124;CL:0000988!2.29e-10!182|ontology_enrichment_celltype_v019=CL:0000945;3.50e-75;24!CL:0000236;2.94e-46;13!CL:0000542;8.93e-30;53|ontology_enrichment_celltype_v019_2=CL:0000945,2.51e-75,24;CL:0000826,2.51e-75,24;CL:0000236,4.75e-43,14;CL:0000542,3.81e-38,53;CL:0000051,3.81e-38,53;CL:0000838,1.16e-33,52;CL:0002087,3.68e-16,115;CL:0000738,2.26e-15,136;CL:0002031,3.30e-13,120;CL:0002032,1.33e-12,161;CL:0000837,1.33e-12,161;CL:0000037,5.66e-12,168;CL:0000988,3.09e-11,177|ontology_enrichment_development_v019=CL:0000051;8.93e-30;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:12603;2.66e-11;1!DOID:0060058;5.17e-09;10|ontology_enrichment_disease_v019_2=DOID:12603,2.53e-11,1;DOID:0060058,5.03e-09,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000029;9.96e-11;1|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.10e-10,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,0.985207073399349,1.02324015707783,0,0,0,0,0,0,1.39440961044543,1.70603078984906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.82297027883492,1.77901850772711,1.70692089026603,3.2031678962881,4.59801951963587,0.661044872784862,2.86216126360609,2.27685187643779,0.587237189370939,1.52909291250092,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0,4.83088255326869,0.432807638929335,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,2.46169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,1.48849806543585,0,1.70509637733254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,1.2217909337381,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404112318087525,0.143444410785353,0,0,0,0,0,0,0,0,0,1.00636896795513,0|short_description=p9@IGHM}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3507 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5541 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-130bp_to_J00258_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_9_at_IGHM_5end | |||
|id=chr14:106320631..106320646,- | |||
|ontology_enrichment_celltype=CL:0000945!1.66e-66!24;CL:0000826!1.66e-66!24;CL:0000236!4.29e-38!14;CL:0000542!5.57e-33!53;CL:0000051!5.57e-33!53;CL:0000838!1.66e-30!52;CL:0002087!9.07e-14!119;CL:0000738!5.53e-12!140;CL:0000037!2.31e-11!172;CL:0000566!2.31e-11!172;CL:0002032!4.06e-11!165;CL:0000837!4.06e-11!165;CL:0002031!1.46e-10!124;CL:0000988!2.29e-10!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.50e-75;24!CL:0000236;2.94e-46;13!CL:0000542;8.93e-30;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.51e-75,24;CL:0000826,2.51e-75,24;CL:0000236,4.75e-43,14;CL:0000542,3.81e-38,53;CL:0000051,3.81e-38,53;CL:0000838,1.16e-33,52;CL:0002087,3.68e-16,115;CL:0000738,2.26e-15,136;CL:0002031,3.30e-13,120;CL:0002032,1.33e-12,161;CL:0000837,1.33e-12,161;CL:0000037,5.66e-12,168;CL:0000988,3.09e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000051;8.93e-30;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;2.66e-11;1!DOID:0060058;5.17e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.53e-11,1;DOID:0060058,5.03e-09,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;9.96e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.10e-10,1 | |||
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|short_description=p9@IGHM | |||
}} |
Revision as of 03:34, 11 September 2013
Short description: | p9@IGHM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_IGHM_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -130bp_to_J00258_5end |
EntrezGene: | IGHM |
HGNC: | 5541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.51e-75 | 24 |
pro-B cell | 2.51e-75 | 24 |
B cell | 4.75e-43 | 14 |
lymphocyte | 3.81e-38 | 53 |
common lymphoid progenitor | 3.81e-38 | 53 |
lymphoid lineage restricted progenitor cell | 1.16e-33 | 52 |
nongranular leukocyte | 3.68e-16 | 115 |
leukocyte | 2.26e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 3.30e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.33e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-12 | 161 |
hematopoietic stem cell | 5.66e-12 | 168 |
hematopoietic cell | 3.09e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.10e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.53e-11 | 1 |
lymphoma | 5.03e-09 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.