FFCP PHASE1:Hg19::chr15:67356817..67356830,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:67356817..67356830,+|id=chr15:67356817..67356830,+|ontology_enrichment_celltype=CL:0000066!3.79e-08!254;CL:1000497!2.21e-07!18;CL:0002518!2.21e-07!18|ontology_enrichment_celltype_v019=CL:1000497;2.15e-15;17!CL:0002518;2.15e-15;17!CL:0000319;3.58e-09;1!CL:1001319;5.70e-09;1!CL:1000600;5.70e-09;1!CL:0002563;3.22e-08;4!CL:1000449;4.46e-08;15!CL:1000507;4.27e-07;10!CL:1000494;4.27e-07;10|ontology_enrichment_celltype_v019_2=CL:1000497,1.87e-15,17;CL:0002518,1.87e-15,17;CL:0000319,3.31e-09,1;CL:1001319,6.65e-09,1;CL:1000600,6.65e-09,1;CL:0002563,2.88e-08,4;CL:1000449,3.87e-08,15;CL:1000507,3.64e-07,10;CL:1000494,3.64e-07,10|ontology_enrichment_development_v019=UBERON:0003104;2.61e-11;31!UBERON:0004161;8.70e-07;11|ontology_enrichment_disease=DOID:305!3.15e-08!106|ontology_enrichment_disease_v019=DOID:3030;3.58e-09;1|ontology_enrichment_disease_v019_2=DOID:3030,3.31e-09,1|ontology_enrichment_uberon=UBERON:0006554!1.68e-07!44;UBERON:0001008!3.29e-07!45|ontology_enrichment_uberon_v019=UBERON:0000489;6.91e-12;29!UBERON:0006554;1.83e-11;30!UBERON:0001008;1.83e-11;30!UBERON:0002113;9.23e-11;24!UBERON:0011143;9.23e-11;24!UBERON:0004645;5.70e-09;1!UBERON:0001256;5.70e-09;1!UBERON:0001259;5.70e-09;1!UBERON:0003350;7.07e-09;8!UBERON:0001052;2.18e-08;4!UBERON:0001242;3.22e-08;4!UBERON:0001262;3.22e-08;4!UBERON:0004786;3.22e-08;4!UBERON:0004808;3.22e-08;4!UBERON:0001277;3.22e-08;4!UBERON:0006555;4.46e-08;15!UBERON:0004819;4.46e-08;15!UBERON:0001285;4.46e-08;15!UBERON:0007684;4.46e-08;15!UBERON:0005172;1.14e-07;52!UBERON:0005173;1.14e-07;52!UBERON:0004211;4.27e-07;10!UBERON:0009773;4.27e-07;10!UBERON:0001231;4.27e-07;10!UBERON:0004810;4.27e-07;10!UBERON:0004907;7.15e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000489,4.31e-11,31;UBERON:0005172,6.17e-10,54;UBERON:0005173,6.17e-10,54;UBERON:0002113,6.22e-10,26;UBERON:0003918,6.22e-10,26;UBERON:0011143,6.22e-10,26;UBERON:0005095,6.22e-10,26;UBERON:0007687,6.22e-10,26;UBERON:0004645,6.65e-09,1;UBERON:0001256,6.65e-09,1;UBERON:0001259,6.65e-09,1;UBERON:0003350,6.89e-09,8;UBERON:0002417,8.36e-09,60;UBERON:0000916,8.36e-09,60;UBERON:0001052,2.40e-08,4;UBERON:0001242,2.88e-08,4;UBERON:0001262,2.88e-08,4;UBERON:0004786,2.88e-08,4;UBERON:0004808,2.88e-08,4;UBERON:0001277,2.88e-08,4;UBERON:0004211,3.87e-08,15;UBERON:0009773,3.87e-08,15;UBERON:0001231,3.87e-08,15;UBERON:0001285,3.87e-08,15;UBERON:0007684,3.87e-08,15;UBERON:0004208,3.87e-08,15;UBERON:0006555,1.23e-07,16;UBERON:0004819,1.23e-07,16;UBERON:0004810,3.64e-07,10;UBERON:0006554,4.89e-07,47;UBERON:0001008,7.13e-07,48;UBERON:0004907,7.70e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,5.58240934377942,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,1.10799081706375,1.60435557976113,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,1.35426486594342,0,0,0.224723484445085,1.53041946185451,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0,0.545492241181669,0,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,1.59884970106048,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.587043471179108,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0.394061520403854,1.07813787429759,0.77005821767849,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0.114814448164607,0,0.131124414959424,0.451199612907412,0.15403067420883,1.56869953835371,1.46139224653261,0.211103257785751,0,0,0.647747748306418,0,0,0.501689773854853,0,0,1.34324852833307,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0.413509717453592,0,0,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2828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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:67356817..67356830,+ | |||
|id=chr15:67356817..67356830,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.79e-08!254;CL:1000497!2.21e-07!18;CL:0002518!2.21e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.15e-15;17!CL:0002518;2.15e-15;17!CL:0000319;3.58e-09;1!CL:1001319;5.70e-09;1!CL:1000600;5.70e-09;1!CL:0002563;3.22e-08;4!CL:1000449;4.46e-08;15!CL:1000507;4.27e-07;10!CL:1000494;4.27e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.87e-15,17;CL:0002518,1.87e-15,17;CL:0000319,3.31e-09,1;CL:1001319,6.65e-09,1;CL:1000600,6.65e-09,1;CL:0002563,2.88e-08,4;CL:1000449,3.87e-08,15;CL:1000507,3.64e-07,10;CL:1000494,3.64e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.61e-11;31!UBERON:0004161;8.70e-07;11 | |||
|ontology_enrichment_disease=DOID:305!3.15e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3030;3.58e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.31e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0006554!1.68e-07!44;UBERON:0001008!3.29e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;6.91e-12;29!UBERON:0006554;1.83e-11;30!UBERON:0001008;1.83e-11;30!UBERON:0002113;9.23e-11;24!UBERON:0011143;9.23e-11;24!UBERON:0004645;5.70e-09;1!UBERON:0001256;5.70e-09;1!UBERON:0001259;5.70e-09;1!UBERON:0003350;7.07e-09;8!UBERON:0001052;2.18e-08;4!UBERON:0001242;3.22e-08;4!UBERON:0001262;3.22e-08;4!UBERON:0004786;3.22e-08;4!UBERON:0004808;3.22e-08;4!UBERON:0001277;3.22e-08;4!UBERON:0006555;4.46e-08;15!UBERON:0004819;4.46e-08;15!UBERON:0001285;4.46e-08;15!UBERON:0007684;4.46e-08;15!UBERON:0005172;1.14e-07;52!UBERON:0005173;1.14e-07;52!UBERON:0004211;4.27e-07;10!UBERON:0009773;4.27e-07;10!UBERON:0001231;4.27e-07;10!UBERON:0004810;4.27e-07;10!UBERON:0004907;7.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,4.31e-11,31;UBERON:0005172,6.17e-10,54;UBERON:0005173,6.17e-10,54;UBERON:0002113,6.22e-10,26;UBERON:0003918,6.22e-10,26;UBERON:0011143,6.22e-10,26;UBERON:0005095,6.22e-10,26;UBERON:0007687,6.22e-10,26;UBERON:0004645,6.65e-09,1;UBERON:0001256,6.65e-09,1;UBERON:0001259,6.65e-09,1;UBERON:0003350,6.89e-09,8;UBERON:0002417,8.36e-09,60;UBERON:0000916,8.36e-09,60;UBERON:0001052,2.40e-08,4;UBERON:0001242,2.88e-08,4;UBERON:0001262,2.88e-08,4;UBERON:0004786,2.88e-08,4;UBERON:0004808,2.88e-08,4;UBERON:0001277,2.88e-08,4;UBERON:0004211,3.87e-08,15;UBERON:0009773,3.87e-08,15;UBERON:0001231,3.87e-08,15;UBERON:0001285,3.87e-08,15;UBERON:0007684,3.87e-08,15;UBERON:0004208,3.87e-08,15;UBERON:0006555,1.23e-07,16;UBERON:0004819,1.23e-07,16;UBERON:0004810,3.64e-07,10;UBERON:0006554,4.89e-07,47;UBERON:0001008,7.13e-07,48;UBERON:0004907,7.70e-07,5 | |||
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|short_description=p@chr15:67356817..67356830,+ | |||
}} |
Revision as of 07:56, 11 September 2013
Short description: | p@chr15:67356817..67356830, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:67356817..67356830, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.87e-15 | 17 |
kidney epithelial cell | 1.87e-15 | 17 |
mucus secreting cell | 3.31e-09 | 1 |
bladder cell | 6.65e-09 | 1 |
lower urinary tract cell | 6.65e-09 | 1 |
intestinal epithelial cell | 2.88e-08 | 4 |
epithelial cell of nephron | 3.87e-08 | 15 |
kidney tubule cell | 3.64e-07 | 10 |
nephron tubule epithelial cell | 3.64e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 4.31e-11 | 31 |
abdomen element | 6.17e-10 | 54 |
abdominal segment element | 6.17e-10 | 54 |
kidney | 6.22e-10 | 26 |
kidney mesenchyme | 6.22e-10 | 26 |
upper urinary tract | 6.22e-10 | 26 |
kidney rudiment | 6.22e-10 | 26 |
kidney field | 6.22e-10 | 26 |
urinary bladder urothelium | 6.65e-09 | 1 |
wall of urinary bladder | 6.65e-09 | 1 |
mucosa of urinary bladder | 6.65e-09 | 1 |
epithelium of mucosa | 6.89e-09 | 8 |
abdominal segment of trunk | 8.36e-09 | 60 |
abdomen | 8.36e-09 | 60 |
rectum | 2.40e-08 | 4 |
intestinal mucosa | 2.88e-08 | 4 |
wall of intestine | 2.88e-08 | 4 |
gastrointestinal system mucosa | 2.88e-08 | 4 |
gastrointestinal system epithelium | 2.88e-08 | 4 |
intestinal epithelium | 2.88e-08 | 4 |
nephron epithelium | 3.87e-08 | 15 |
renal tubule | 3.87e-08 | 15 |
nephron tubule | 3.87e-08 | 15 |
nephron | 3.87e-08 | 15 |
uriniferous tubule | 3.87e-08 | 15 |
nephrogenic mesenchyme | 3.87e-08 | 15 |
excretory tube | 1.23e-07 | 16 |
kidney epithelium | 1.23e-07 | 16 |
nephron tubule epithelium | 3.64e-07 | 10 |
urinary system structure | 4.89e-07 | 47 |
renal system | 7.13e-07 | 48 |
lower digestive tract | 7.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.31e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.