FFCP PHASE1:Hg19::chr15:81666546..81666560,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=342125|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=22995|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000558726_5end|description=CAGE_peak_1_at_TMC3_5end|id=chr15:81666546..81666560,-|ontology_enrichment_celltype=CL:0000064!1.59e-09!3;CL:0005012!1.59e-09!3;CL:0000067!1.59e-09!3;CL:0002304!1.59e-09!3;CL:1000306!9.85e-08!4;CL:0002547!9.85e-08!4|ontology_enrichment_celltype_v019=CL:0002586;8.96e-09;3!CL:0000149;6.87e-07;4|ontology_enrichment_celltype_v019_2=CL:0002586,8.96e-09,3;CL:0000149,6.87e-07,4|ontology_enrichment_development_v019=UBERON:0004874;1.67e-23;1!UBERON:0005062;9.10e-07;4!UBERON:0007284;9.10e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007625!7.39e-17!11;UBERON:0000488!2.50e-12!4;UBERON:0000019!2.01e-11!19;UBERON:0000047!2.01e-11!19;UBERON:0004088!2.01e-11!19;UBERON:0003072!2.01e-11!19;UBERON:0003071!2.01e-11!19;UBERON:0004128!2.01e-11!19;UBERON:0003075!4.03e-11!86;UBERON:0007284!4.03e-11!86;UBERON:0000970!9.12e-11!20;UBERON:0006947!1.14e-10!3;UBERON:0004054!1.14e-10!3;UBERON:0002346!2.12e-10!90;UBERON:0002104!3.58e-10!21;UBERON:0001456!3.58e-10!21;UBERON:0007023!7.72e-10!115;UBERON:0001778!1.59e-09!3;UBERON:0001775!1.59e-09!3;UBERON:0000020!3.85e-09!23;UBERON:0001032!1.09e-08!24;UBERON:0004456!1.09e-08!24;UBERON:0003056!1.66e-08!61;UBERON:0002203!3.13e-08!6;UBERON:0001768!3.13e-08!6;UBERON:0005904!4.37e-08!4;UBERON:0000415!9.85e-08!4;UBERON:0007240!9.85e-08!4;UBERON:0005742!9.85e-08!4;UBERON:0005734!9.85e-08!4;UBERON:0004664!9.85e-08!4;UBERON:0004663!9.85e-08!4;UBERON:0003135!2.20e-07!11;UBERON:0001801!3.15e-07!14;UBERON:0005085!6.56e-07!29|ontology_enrichment_uberon_v019=UBERON:0000989;1.67e-23;1!UBERON:0008811;1.67e-23;1!UBERON:0002135;4.10e-23;1!UBERON:0002133;2.90e-12;2!UBERON:0000059;5.63e-09;11!UBERON:0001781;8.96e-09;3!UBERON:0001782;8.96e-09;3!UBERON:0003978;1.30e-08;3!UBERON:0000946;1.30e-08;3!UBERON:0001052;7.69e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000989,1.67e-23,1;UBERON:0008811,1.67e-23,1;UBERON:0006258,1.67e-23,1;UBERON:0005876,1.67e-23,1;UBERON:0004874,1.67e-23,1;UBERON:0002135,5.13e-23,1;UBERON:0002133,3.24e-12,2;UBERON:0000059,5.41e-09,11;UBERON:0001782,8.96e-09,3;UBERON:0005424,8.96e-09,3;UBERON:0003978,1.40e-08,3;UBERON:0009751,1.40e-08,3;UBERON:0000946,1.40e-08,3;UBERON:0002523,1.40e-08,3;UBERON:0005983,1.40e-08,3;UBERON:0002165,1.40e-08,3;UBERON:0002062,1.40e-08,3;UBERON:0007280,1.40e-08,3;UBERON:0001781,6.87e-07,4;UBERON:0001052,7.70e-07,4|phase1_expression=0,0,0.704772020479856,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,0.221729397462564,0.087834785693126,0,0,0,0.649094787309367,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8244833080903,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,11.0537709353984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61737217095023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.06753758461839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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=342125 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22995 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000558726_5end | |||
|description=CAGE_peak_1_at_TMC3_5end | |||
|id=chr15:81666546..81666560,- | |||
|ontology_enrichment_celltype=CL:0000064!1.59e-09!3;CL:0005012!1.59e-09!3;CL:0000067!1.59e-09!3;CL:0002304!1.59e-09!3;CL:1000306!9.85e-08!4;CL:0002547!9.85e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;8.96e-09;3!CL:0000149;6.87e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,8.96e-09,3;CL:0000149,6.87e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.67e-23;1!UBERON:0005062;9.10e-07;4!UBERON:0007284;9.10e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!7.39e-17!11;UBERON:0000488!2.50e-12!4;UBERON:0000019!2.01e-11!19;UBERON:0000047!2.01e-11!19;UBERON:0004088!2.01e-11!19;UBERON:0003072!2.01e-11!19;UBERON:0003071!2.01e-11!19;UBERON:0004128!2.01e-11!19;UBERON:0003075!4.03e-11!86;UBERON:0007284!4.03e-11!86;UBERON:0000970!9.12e-11!20;UBERON:0006947!1.14e-10!3;UBERON:0004054!1.14e-10!3;UBERON:0002346!2.12e-10!90;UBERON:0002104!3.58e-10!21;UBERON:0001456!3.58e-10!21;UBERON:0007023!7.72e-10!115;UBERON:0001778!1.59e-09!3;UBERON:0001775!1.59e-09!3;UBERON:0000020!3.85e-09!23;UBERON:0001032!1.09e-08!24;UBERON:0004456!1.09e-08!24;UBERON:0003056!1.66e-08!61;UBERON:0002203!3.13e-08!6;UBERON:0001768!3.13e-08!6;UBERON:0005904!4.37e-08!4;UBERON:0000415!9.85e-08!4;UBERON:0007240!9.85e-08!4;UBERON:0005742!9.85e-08!4;UBERON:0005734!9.85e-08!4;UBERON:0004664!9.85e-08!4;UBERON:0004663!9.85e-08!4;UBERON:0003135!2.20e-07!11;UBERON:0001801!3.15e-07!14;UBERON:0005085!6.56e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;1.67e-23;1!UBERON:0008811;1.67e-23;1!UBERON:0002135;4.10e-23;1!UBERON:0002133;2.90e-12;2!UBERON:0000059;5.63e-09;11!UBERON:0001781;8.96e-09;3!UBERON:0001782;8.96e-09;3!UBERON:0003978;1.30e-08;3!UBERON:0000946;1.30e-08;3!UBERON:0001052;7.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,1.67e-23,1;UBERON:0008811,1.67e-23,1;UBERON:0006258,1.67e-23,1;UBERON:0005876,1.67e-23,1;UBERON:0004874,1.67e-23,1;UBERON:0002135,5.13e-23,1;UBERON:0002133,3.24e-12,2;UBERON:0000059,5.41e-09,11;UBERON:0001782,8.96e-09,3;UBERON:0005424,8.96e-09,3;UBERON:0003978,1.40e-08,3;UBERON:0009751,1.40e-08,3;UBERON:0000946,1.40e-08,3;UBERON:0002523,1.40e-08,3;UBERON:0005983,1.40e-08,3;UBERON:0002165,1.40e-08,3;UBERON:0002062,1.40e-08,3;UBERON:0007280,1.40e-08,3;UBERON:0001781,6.87e-07,4;UBERON:0001052,7.70e-07,4 | |||
|phase1_expression=0,0,0.704772020479856,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,0.221729397462564,0.087834785693126,0,0,0,0.649094787309367,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8244833080903,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,11.0537709353984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61737217095023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0,0,0,3.47347824872506,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0.131545547125698,0,0,0,0,0,2.73947616152849,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0,0,0,0,0.714193294391221,0,0,0,0.12729431655633,1.0105859447911,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@TMC3 | |||
}} |
Revision as of 08:34, 11 September 2013
Short description: | p1@TMC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TMC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000558726_5end |
EntrezGene: | TMC3 |
HGNC: | 22995 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 8.96e-09 | 3 |
visual pigment cell | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
penis | 1.67e-23 | 1 |
intromittent organ | 1.67e-23 | 1 |
lateral plate mesenchyme | 1.67e-23 | 1 |
undifferentiated genital tubercle | 1.67e-23 | 1 |
somatopleure | 1.67e-23 | 1 |
mitral valve | 5.13e-23 | 1 |
atrioventricular valve | 3.24e-12 | 2 |
large intestine | 5.41e-09 | 11 |
pigmented layer of retina | 8.96e-09 | 3 |
presumptive retinal pigmented epithelium | 8.96e-09 | 3 |
valve | 1.40e-08 | 3 |
cardiac mesenchyme | 1.40e-08 | 3 |
cardial valve | 1.40e-08 | 3 |
tunica intima | 1.40e-08 | 3 |
heart layer | 1.40e-08 | 3 |
endocardium | 1.40e-08 | 3 |
endocardial cushion | 1.40e-08 | 3 |
presumptive endocardium | 1.40e-08 | 3 |
layer of retina | 6.87e-07 | 4 |
rectum | 7.70e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.