FFCP PHASE1:Hg19::chr16:12010508..12010516,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2935|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=4621|TSSclassifier=S|UniProt=P15170,B2RCT6,Q7KZX8|association_with_transcript=2bp_to_ENST00000420576,NM_001130007,uc010bux.2_5end|description=CAGE_peak_12_at_GSPT1_5end|id=chr16:12010508..12010516,-|ontology_enrichment_celltype=CL:0000223!5.84e-10!59;CL:0000066!5.22e-08!254;CL:0002076!1.01e-07!43;CL:0002150!7.34e-07!3;CL:0000861!7.34e-07!3|ontology_enrichment_celltype_v019=CL:0000182;5.59e-50;12|ontology_enrichment_celltype_v019_2=CL:0000182,5.59e-50,12;CL:0000223,2.67e-11,58|ontology_enrichment_development_v019=UBERON:0004161;2.16e-54;11!UBERON:0009497;3.04e-46;13!UBERON:0001041;8.87e-21;30!UBERON:0003104;1.08e-19;31!CL:0000223;9.26e-08;58|ontology_enrichment_disease_v019=DOID:7;7.13e-17;39|ontology_enrichment_disease_v019_2=DOID:7,2.93e-16,39|ontology_enrichment_uberon=UBERON:0001737!7.26e-16!9;UBERON:0001004!1.49e-11!72;UBERON:0000065!2.01e-10!53;UBERON:0008947!4.91e-10!38;UBERON:0003258!4.91e-10!38;UBERON:0004119!9.28e-09!169;UBERON:0000925!9.28e-09!169;UBERON:0006595!9.28e-09!169;UBERON:0001557!2.19e-08!19;UBERON:0004921!2.30e-08!129;UBERON:0004185!2.30e-08!129;UBERON:0001007!2.84e-08!155;UBERON:0001555!2.84e-08!155;UBERON:0007026!2.84e-08!155;UBERON:0001041!5.24e-08!98;UBERON:0000077!1.20e-07!130;UBERON:0000072!1.40e-07!46|ontology_enrichment_uberon_v019=UBERON:0002107;4.52e-32;19!UBERON:0006925;4.52e-32;19!UBERON:0002423;1.10e-24;25!UBERON:0002365;1.31e-18;31!UBERON:0002330;1.31e-18;31!UBERON:0002368;1.59e-17;33!UBERON:0000949;1.28e-13;43!UBERON:0002530;5.60e-08;57!UBERON:0002417;1.64e-07;58!UBERON:0000916;1.64e-07;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.52e-32,19;UBERON:0006925,4.52e-32,19;UBERON:0008836,4.52e-32,19;UBERON:0008835,7.08e-28,22;UBERON:0003894,7.08e-28,22;UBERON:0009854,1.01e-26,23;UBERON:0007499,1.10e-24,25;UBERON:0009497,1.10e-24,25;UBERON:0000015,1.10e-24,25;UBERON:0002423,1.10e-24,25;UBERON:0006235,1.10e-24,25;UBERON:0004161,1.10e-24,25;UBERON:0009856,8.76e-24,26;UBERON:0002365,3.79e-20,31;UBERON:0002330,3.79e-20,31;UBERON:0002368,5.55e-18,35;UBERON:0000949,3.03e-14,45;UBERON:0003929,4.68e-12,54;UBERON:0005172,4.68e-12,54;UBERON:0005173,4.68e-12,54;UBERON:0002530,3.99e-11,59;UBERON:0002417,5.86e-11,60;UBERON:0000916,5.86e-11,60;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723280468230358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.482022059766964,0.330881918197182,0.217879444092406,0.474541238222193,0.404493924480493,0,0.769494313892781,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0.568272293612826,0.47748896947538,0,0.307160702099232,0.994147647766298,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.60129367765797,0.207376382794494,0,0,0,0,0.284609546029793,0,0,0.881931576729399,0.0870592065804026,0,0.51595809741485,0.19351266257817,0.219267951258557,0.0821154570532092,0,0.0882561266915003,0,0,0,0.126621591911757,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3393140992228,1.2362378757175,1.41547442093788,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0.4640337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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2935 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4621 | |||
|TSSclassifier=S | |||
|UniProt=P15170,B2RCT6,Q7KZX8 | |||
|association_with_transcript=2bp_to_ENST00000420576,NM_001130007,uc010bux.2_5end | |||
|description=CAGE_peak_12_at_GSPT1_5end | |||
|id=chr16:12010508..12010516,- | |||
|ontology_enrichment_celltype=CL:0000223!5.84e-10!59;CL:0000066!5.22e-08!254;CL:0002076!1.01e-07!43;CL:0002150!7.34e-07!3;CL:0000861!7.34e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.59e-50;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.59e-50,12;CL:0000223,2.67e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.16e-54;11!UBERON:0009497;3.04e-46;13!UBERON:0001041;8.87e-21;30!UBERON:0003104;1.08e-19;31!CL:0000223;9.26e-08;58 | |||
|ontology_enrichment_disease_v019=DOID:7;7.13e-17;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.93e-16,39 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.26e-16!9;UBERON:0001004!1.49e-11!72;UBERON:0000065!2.01e-10!53;UBERON:0008947!4.91e-10!38;UBERON:0003258!4.91e-10!38;UBERON:0004119!9.28e-09!169;UBERON:0000925!9.28e-09!169;UBERON:0006595!9.28e-09!169;UBERON:0001557!2.19e-08!19;UBERON:0004921!2.30e-08!129;UBERON:0004185!2.30e-08!129;UBERON:0001007!2.84e-08!155;UBERON:0001555!2.84e-08!155;UBERON:0007026!2.84e-08!155;UBERON:0001041!5.24e-08!98;UBERON:0000077!1.20e-07!130;UBERON:0000072!1.40e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.52e-32;19!UBERON:0006925;4.52e-32;19!UBERON:0002423;1.10e-24;25!UBERON:0002365;1.31e-18;31!UBERON:0002330;1.31e-18;31!UBERON:0002368;1.59e-17;33!UBERON:0000949;1.28e-13;43!UBERON:0002530;5.60e-08;57!UBERON:0002417;1.64e-07;58!UBERON:0000916;1.64e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.52e-32,19;UBERON:0006925,4.52e-32,19;UBERON:0008836,4.52e-32,19;UBERON:0008835,7.08e-28,22;UBERON:0003894,7.08e-28,22;UBERON:0009854,1.01e-26,23;UBERON:0007499,1.10e-24,25;UBERON:0009497,1.10e-24,25;UBERON:0000015,1.10e-24,25;UBERON:0002423,1.10e-24,25;UBERON:0006235,1.10e-24,25;UBERON:0004161,1.10e-24,25;UBERON:0009856,8.76e-24,26;UBERON:0002365,3.79e-20,31;UBERON:0002330,3.79e-20,31;UBERON:0002368,5.55e-18,35;UBERON:0000949,3.03e-14,45;UBERON:0003929,4.68e-12,54;UBERON:0005172,4.68e-12,54;UBERON:0005173,4.68e-12,54;UBERON:0002530,3.99e-11,59;UBERON:0002417,5.86e-11,60;UBERON:0000916,5.86e-11,60;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723280468230358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.482022059766964,0.330881918197182,0.217879444092406,0.474541238222193,0.404493924480493,0,0.769494313892781,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0.568272293612826,0.47748896947538,0,0.307160702099232,0.994147647766298,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.60129367765797,0.207376382794494,0,0,0,0,0.284609546029793,0,0,0.881931576729399,0.0870592065804026,0,0.51595809741485,0.19351266257817,0.219267951258557,0.0821154570532092,0,0.0882561266915003,0,0,0,0.126621591911757,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3393140992228,1.2362378757175,1.41547442093788,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.251567901752575,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@GSPT1 | |||
}} |
Revision as of 09:15, 11 September 2013
Short description: | p12@GSPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_GSPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000420576, NM_001130007, uc010bux.2_5end |
EntrezGene: | GSPT1 |
HGNC: | 4621 |
UniProt: | P15170B2RCT6Q7KZX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.59e-50 | 12 |
endodermal cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 4.52e-32 | 19 |
digestive gland | 4.52e-32 | 19 |
liver bud | 4.52e-32 | 19 |
hepatic diverticulum | 7.08e-28 | 22 |
liver primordium | 7.08e-28 | 22 |
digestive tract diverticulum | 1.01e-26 | 23 |
epithelial sac | 1.10e-24 | 25 |
epithelium of foregut-midgut junction | 1.10e-24 | 25 |
anatomical boundary | 1.10e-24 | 25 |
hepatobiliary system | 1.10e-24 | 25 |
foregut-midgut junction | 1.10e-24 | 25 |
septum transversum | 1.10e-24 | 25 |
sac | 8.76e-24 | 26 |
exocrine gland | 3.79e-20 | 31 |
exocrine system | 3.79e-20 | 31 |
endocrine gland | 5.55e-18 | 35 |
endocrine system | 3.03e-14 | 45 |
gut epithelium | 4.68e-12 | 54 |
abdomen element | 4.68e-12 | 54 |
abdominal segment element | 4.68e-12 | 54 |
gland | 3.99e-11 | 59 |
abdominal segment of trunk | 5.86e-11 | 60 |
abdomen | 5.86e-11 | 60 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
trunk region element | 6.45e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.93e-16 | 39 |
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