FFCP PHASE1:Hg19::chr18:21693273..21693301,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=125488|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26595|TSSclassifier=S|UniProt=G3V1P2|association_with_transcript=-15bp_to_ENST00000540918_5end|coexpression_cluster_id=C5|description=CAGE_peak_7_at_TTC39C_5end|id=chr18:21693273..21693301,+|ontology_enrichment_celltype=CL:0000181!2.70e-17!12;CL:0000417!2.70e-17!12;CL:0000668!2.70e-17!12;CL:0000414!2.70e-17!12;CL:0000412!2.70e-17!12;CL:0000182!2.70e-17!12|ontology_enrichment_celltype_v019=CL:0000182;3.67e-33;12!CL:0002535;8.06e-07;2|ontology_enrichment_celltype_v019_2=CL:0000182,3.67e-33,12;CL:0000223,8.73e-09,58;CL:0002535,8.06e-07,2|ontology_enrichment_development_v019=UBERON:0004161;3.85e-36;11!UBERON:0009497;1.50e-30;13!UBERON:0006242;1.57e-12;1!UBERON:0003104;2.61e-12;31!UBERON:0001041;2.92e-09;30!CL:0000223;7.50e-07;58|ontology_enrichment_disease=DOID:305!3.45e-10!106;DOID:3493!1.72e-07!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009497!1.38e-20!25;UBERON:0000015!1.38e-20!25;UBERON:0002423!1.38e-20!25;UBERON:0006235!1.38e-20!25;UBERON:0004161!1.38e-20!25;UBERON:0008835!4.02e-20!22;UBERON:0003894!4.02e-20!22;UBERON:0002107!6.17e-20!19;UBERON:0006925!6.17e-20!19;UBERON:0008836!6.17e-20!19;UBERON:0009854!4.03e-19!23;UBERON:0007499!2.32e-17!25;UBERON:0009856!1.39e-16!26;UBERON:0005057!1.63e-16!26;UBERON:0002368!5.28e-16!35;UBERON:0000949!1.39e-13!45;UBERON:0004921!1.17e-12!129;UBERON:0004185!1.17e-12!129;UBERON:0005172!6.59e-12!55;UBERON:0005173!6.59e-12!55;UBERON:0001041!7.48e-12!98;UBERON:0001007!2.28e-11!155;UBERON:0001555!2.28e-11!155;UBERON:0007026!2.28e-11!155;UBERON:0002365!3.03e-11!31;UBERON:0002330!3.03e-11!31;UBERON:0003929!9.45e-11!54;UBERON:0002417!2.35e-10!61;UBERON:0000916!2.35e-10!61;UBERON:0004119!7.72e-10!169;UBERON:0000925!7.72e-10!169;UBERON:0006595!7.72e-10!169;UBERON:0005177!1.72e-09!107;UBERON:0000077!1.85e-09!130;UBERON:0002530!1.93e-09!59;UBERON:0005911!6.58e-09!82;UBERON:0003296!3.94e-08!4;UBERON:0010133!3.94e-08!4;UBERON:0009569!8.87e-08!113;UBERON:0001905!9.50e-08!2;UBERON:0002757!9.50e-08!2;UBERON:0010134!9.50e-08!2;UBERON:0002784!9.50e-08!2;UBERON:0005408!9.50e-08!2;UBERON:0001899!9.50e-08!2;UBERON:0000481!1.40e-07!347;UBERON:0000466!2.41e-07!126;UBERON:0007023!3.35e-07!115;UBERON:0000025!5.76e-07!194|ontology_enrichment_uberon_v019=UBERON:0002107;6.65e-37;19!UBERON:0006925;6.65e-37;19!UBERON:0002423;3.37e-35;25!UBERON:0002368;9.60e-24;33!UBERON:0002365;1.70e-21;31!UBERON:0002330;1.70e-21;31!UBERON:0000949;4.06e-17;43!UBERON:0001301;4.31e-12;1!UBERON:0005172;1.52e-09;52!UBERON:0005173;1.52e-09;52!UBERON:0002530;6.95e-09;57!UBERON:0002417;8.55e-09;58!UBERON:0000916;8.55e-09;58!UBERON:0001007;6.48e-07;81!UBERON:0006955;8.06e-07;2!UBERON:0004801;8.06e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.65e-37,19;UBERON:0006925,6.65e-37,19;UBERON:0008836,6.65e-37,19;UBERON:0009497,3.37e-35,25;UBERON:0000015,3.37e-35,25;UBERON:0002423,3.37e-35,25;UBERON:0006235,3.37e-35,25;UBERON:0004161,3.37e-35,25;UBERON:0008835,9.01e-32,22;UBERON:0003894,9.01e-32,22;UBERON:0009854,2.34e-30,23;UBERON:0007499,7.22e-28,25;UBERON:0009856,9.12e-27,26;UBERON:0002368,9.01e-25,35;UBERON:0002365,2.54e-22,31;UBERON:0002330,2.54e-22,31;UBERON:0003929,2.11e-19,54;UBERON:0005172,2.25e-19,54;UBERON:0005173,2.25e-19,54;UBERON:0000949,4.91e-19,45;UBERON:0002417,2.61e-17,60;UBERON:0000916,2.61e-17,60;UBERON:0002530,2.92e-14,59;UBERON:0005911,2.50e-12,82;UBERON:0001301,4.31e-12,1;UBERON:0005177,9.66e-10,101;UBERON:0009569,1.19e-08,112;UBERON:0003914,3.20e-08,117;UBERON:0005256,7.92e-08,122;UBERON:0001041,2.23e-07,87;UBERON:0006955,8.06e-07,2;UBERON:0004801,8.06e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,134.360336911141,70.7635596007891,63.2145200149102,0,3.44367627920718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,58.0120895576676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.9006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=125488 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26595 | |||
|TSSclassifier=S | |||
|UniProt=G3V1P2 | |||
|association_with_transcript=-15bp_to_ENST00000540918_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_7_at_TTC39C_5end | |||
|id=chr18:21693273..21693301,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.70e-17!12;CL:0000417!2.70e-17!12;CL:0000668!2.70e-17!12;CL:0000414!2.70e-17!12;CL:0000412!2.70e-17!12;CL:0000182!2.70e-17!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.67e-33;12!CL:0002535;8.06e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.67e-33,12;CL:0000223,8.73e-09,58;CL:0002535,8.06e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.85e-36;11!UBERON:0009497;1.50e-30;13!UBERON:0006242;1.57e-12;1!UBERON:0003104;2.61e-12;31!UBERON:0001041;2.92e-09;30!CL:0000223;7.50e-07;58 | |||
|ontology_enrichment_disease=DOID:305!3.45e-10!106;DOID:3493!1.72e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!1.38e-20!25;UBERON:0000015!1.38e-20!25;UBERON:0002423!1.38e-20!25;UBERON:0006235!1.38e-20!25;UBERON:0004161!1.38e-20!25;UBERON:0008835!4.02e-20!22;UBERON:0003894!4.02e-20!22;UBERON:0002107!6.17e-20!19;UBERON:0006925!6.17e-20!19;UBERON:0008836!6.17e-20!19;UBERON:0009854!4.03e-19!23;UBERON:0007499!2.32e-17!25;UBERON:0009856!1.39e-16!26;UBERON:0005057!1.63e-16!26;UBERON:0002368!5.28e-16!35;UBERON:0000949!1.39e-13!45;UBERON:0004921!1.17e-12!129;UBERON:0004185!1.17e-12!129;UBERON:0005172!6.59e-12!55;UBERON:0005173!6.59e-12!55;UBERON:0001041!7.48e-12!98;UBERON:0001007!2.28e-11!155;UBERON:0001555!2.28e-11!155;UBERON:0007026!2.28e-11!155;UBERON:0002365!3.03e-11!31;UBERON:0002330!3.03e-11!31;UBERON:0003929!9.45e-11!54;UBERON:0002417!2.35e-10!61;UBERON:0000916!2.35e-10!61;UBERON:0004119!7.72e-10!169;UBERON:0000925!7.72e-10!169;UBERON:0006595!7.72e-10!169;UBERON:0005177!1.72e-09!107;UBERON:0000077!1.85e-09!130;UBERON:0002530!1.93e-09!59;UBERON:0005911!6.58e-09!82;UBERON:0003296!3.94e-08!4;UBERON:0010133!3.94e-08!4;UBERON:0009569!8.87e-08!113;UBERON:0001905!9.50e-08!2;UBERON:0002757!9.50e-08!2;UBERON:0010134!9.50e-08!2;UBERON:0002784!9.50e-08!2;UBERON:0005408!9.50e-08!2;UBERON:0001899!9.50e-08!2;UBERON:0000481!1.40e-07!347;UBERON:0000466!2.41e-07!126;UBERON:0007023!3.35e-07!115;UBERON:0000025!5.76e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.65e-37;19!UBERON:0006925;6.65e-37;19!UBERON:0002423;3.37e-35;25!UBERON:0002368;9.60e-24;33!UBERON:0002365;1.70e-21;31!UBERON:0002330;1.70e-21;31!UBERON:0000949;4.06e-17;43!UBERON:0001301;4.31e-12;1!UBERON:0005172;1.52e-09;52!UBERON:0005173;1.52e-09;52!UBERON:0002530;6.95e-09;57!UBERON:0002417;8.55e-09;58!UBERON:0000916;8.55e-09;58!UBERON:0001007;6.48e-07;81!UBERON:0006955;8.06e-07;2!UBERON:0004801;8.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.65e-37,19;UBERON:0006925,6.65e-37,19;UBERON:0008836,6.65e-37,19;UBERON:0009497,3.37e-35,25;UBERON:0000015,3.37e-35,25;UBERON:0002423,3.37e-35,25;UBERON:0006235,3.37e-35,25;UBERON:0004161,3.37e-35,25;UBERON:0008835,9.01e-32,22;UBERON:0003894,9.01e-32,22;UBERON:0009854,2.34e-30,23;UBERON:0007499,7.22e-28,25;UBERON:0009856,9.12e-27,26;UBERON:0002368,9.01e-25,35;UBERON:0002365,2.54e-22,31;UBERON:0002330,2.54e-22,31;UBERON:0003929,2.11e-19,54;UBERON:0005172,2.25e-19,54;UBERON:0005173,2.25e-19,54;UBERON:0000949,4.91e-19,45;UBERON:0002417,2.61e-17,60;UBERON:0000916,2.61e-17,60;UBERON:0002530,2.92e-14,59;UBERON:0005911,2.50e-12,82;UBERON:0001301,4.31e-12,1;UBERON:0005177,9.66e-10,101;UBERON:0009569,1.19e-08,112;UBERON:0003914,3.20e-08,117;UBERON:0005256,7.92e-08,122;UBERON:0001041,2.23e-07,87;UBERON:0006955,8.06e-07,2;UBERON:0004801,8.06e-07,2 | |||
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|short_description=p7@TTC39C | |||
}} |
Revision as of 17:02, 11 September 2013
Short description: | p7@TTC39C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TTC39C_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -15bp_to_ENST00000540918_5end |
EntrezGene: | TTC39C |
HGNC: | 26595 |
UniProt: | G3V1P2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.67e-33 | 12 |
endodermal cell | 8.73e-09 | 58 |
epithelial cell of cervix | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 6.65e-37 | 19 |
digestive gland | 6.65e-37 | 19 |
liver bud | 6.65e-37 | 19 |
epithelium of foregut-midgut junction | 3.37e-35 | 25 |
anatomical boundary | 3.37e-35 | 25 |
hepatobiliary system | 3.37e-35 | 25 |
foregut-midgut junction | 3.37e-35 | 25 |
septum transversum | 3.37e-35 | 25 |
hepatic diverticulum | 9.01e-32 | 22 |
liver primordium | 9.01e-32 | 22 |
digestive tract diverticulum | 2.34e-30 | 23 |
epithelial sac | 7.22e-28 | 25 |
sac | 9.12e-27 | 26 |
endocrine gland | 9.01e-25 | 35 |
exocrine gland | 2.54e-22 | 31 |
exocrine system | 2.54e-22 | 31 |
gut epithelium | 2.11e-19 | 54 |
abdomen element | 2.25e-19 | 54 |
abdominal segment element | 2.25e-19 | 54 |
endocrine system | 4.91e-19 | 45 |
abdominal segment of trunk | 2.61e-17 | 60 |
abdomen | 2.61e-17 | 60 |
gland | 2.92e-14 | 59 |
endo-epithelium | 2.50e-12 | 82 |
epididymis | 4.31e-12 | 1 |
trunk region element | 9.66e-10 | 101 |
subdivision of trunk | 1.19e-08 | 112 |
epithelial tube | 3.20e-08 | 117 |
trunk mesenchyme | 7.92e-08 | 122 |
foregut | 2.23e-07 | 87 |
uterine epithelium | 8.06e-07 | 2 |
cervix epithelium | 8.06e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.