FFCP PHASE1:Hg19::chr19:46928841..46928843,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2130|description=CAGE_peak_at_chr19:46928841..46928843,-|id=chr19:46928841..46928843,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006238;5.49e-25;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.58e-89!57;UBERON:0005068!3.58e-89!57;UBERON:0006241!3.58e-89!57;UBERON:0007135!3.58e-89!57;UBERON:0001017!5.82e-79!82;UBERON:0002020!6.26e-78!34;UBERON:0003528!6.26e-78!34;UBERON:0001893!1.45e-77!34;UBERON:0000955!1.65e-76!69;UBERON:0006238!1.65e-76!69;UBERON:0002616!3.42e-76!59;UBERON:0005743!5.44e-75!86;UBERON:0002780!1.45e-74!41;UBERON:0001890!1.45e-74!41;UBERON:0006240!1.45e-74!41;UBERON:0002791!7.13e-74!33;UBERON:0003080!1.12e-72!42;UBERON:0001869!4.28e-70!32;UBERON:0000073!2.98e-67!94;UBERON:0001016!2.98e-67!94;UBERON:0003075!9.64e-64!86;UBERON:0007284!9.64e-64!86;UBERON:0002346!1.40e-60!90;UBERON:0003056!5.47e-52!61;UBERON:0002619!7.44e-51!22;UBERON:0000956!4.83e-50!25;UBERON:0000203!4.83e-50!25;UBERON:0007023!1.57e-49!115;UBERON:0000033!4.37e-45!123;UBERON:0001950!2.96e-43!20;UBERON:0000153!1.22e-42!129;UBERON:0007811!1.22e-42!129;UBERON:0004121!3.61e-36!169;UBERON:0000924!3.76e-35!173;UBERON:0006601!3.76e-35!173;UBERON:0002420!4.36e-30!9;UBERON:0007245!4.36e-30!9;UBERON:0010009!4.36e-30!9;UBERON:0010011!4.36e-30!9;UBERON:0000454!4.36e-30!9;UBERON:0002308!9.02e-30!9;UBERON:0000125!9.02e-30!9;UBERON:0000349!1.51e-22!5;UBERON:0000025!2.25e-22!194;UBERON:0009663!1.16e-21!7;UBERON:0001871!3.05e-19!7;UBERON:0000200!5.02e-18!6;UBERON:0000369!5.48e-18!4;UBERON:0002435!5.48e-18!4;UBERON:0000204!5.48e-18!4;UBERON:0010082!5.48e-18!4;UBERON:0003076!3.40e-17!15;UBERON:0003057!3.40e-17!15;UBERON:0004111!1.91e-16!241;UBERON:0002021!4.84e-14!5;UBERON:0005383!5.37e-14!3;UBERON:0005382!5.37e-14!3;UBERON:0006331!9.47e-14!3;UBERON:0000988!1.08e-13!3;UBERON:0000477!1.17e-13!286;UBERON:0002771!1.18e-13!3;UBERON:0002298!2.41e-13!8;UBERON:0000483!6.95e-13!309;UBERON:0000064!8.45e-13!219;UBERON:0000119!1.11e-12!312;UBERON:0004733!1.60e-12!12;UBERON:0002028!1.60e-12!12;UBERON:0007277!1.60e-12!12;UBERON:0000475!2.29e-12!365;UBERON:0002680!7.15e-12!9;UBERON:0001895!7.15e-12!9;UBERON:0010092!7.15e-12!9;UBERON:0004732!1.64e-11!13;UBERON:0001876!2.11e-10!2;UBERON:0002148!4.96e-10!2;UBERON:0009662!4.96e-10!2;UBERON:0001954!6.77e-10!2;UBERON:0003022!6.77e-10!2;UBERON:0002421!6.77e-10!2;UBERON:0002600!6.77e-10!2;UBERON:0001873!7.07e-10!2;UBERON:0010122!7.07e-10!2;UBERON:0001872!1.09e-08!5;UBERON:0000062!1.51e-07!511|ontology_enrichment_uberon_v019=UBERON:0003112;2.39e-66;1!UBERON:0011158;2.39e-66;1!UBERON:0003128;2.39e-66;1!UBERON:0001703;2.39e-66;1!UBERON:0002241;2.39e-66;1!UBERON:0011159;1.60e-14;5!UBERON:0003129;8.99e-11;7!UBERON:0011137;2.47e-07;11!UBERON:0010323;2.47e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0003112,2.39e-66,1;UBERON:0011158,2.39e-66,1;UBERON:0003128,2.39e-66,1;UBERON:0001703,2.39e-66,1;UBERON:0002241,2.39e-66,1;UBERON:0004761,2.39e-66,1;UBERON:0009617,2.39e-66,1;UBERON:0005253,5.04e-34,2;UBERON:0011159,1.60e-14,5;UBERON:0003129,8.99e-11,7;UBERON:0010323,2.47e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.02044907978036,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2130 | |||
|description=CAGE_peak_at_chr19:46928841..46928843,- | |||
|id=chr19:46928841..46928843,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.49e-25;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.58e-89!57;UBERON:0005068!3.58e-89!57;UBERON:0006241!3.58e-89!57;UBERON:0007135!3.58e-89!57;UBERON:0001017!5.82e-79!82;UBERON:0002020!6.26e-78!34;UBERON:0003528!6.26e-78!34;UBERON:0001893!1.45e-77!34;UBERON:0000955!1.65e-76!69;UBERON:0006238!1.65e-76!69;UBERON:0002616!3.42e-76!59;UBERON:0005743!5.44e-75!86;UBERON:0002780!1.45e-74!41;UBERON:0001890!1.45e-74!41;UBERON:0006240!1.45e-74!41;UBERON:0002791!7.13e-74!33;UBERON:0003080!1.12e-72!42;UBERON:0001869!4.28e-70!32;UBERON:0000073!2.98e-67!94;UBERON:0001016!2.98e-67!94;UBERON:0003075!9.64e-64!86;UBERON:0007284!9.64e-64!86;UBERON:0002346!1.40e-60!90;UBERON:0003056!5.47e-52!61;UBERON:0002619!7.44e-51!22;UBERON:0000956!4.83e-50!25;UBERON:0000203!4.83e-50!25;UBERON:0007023!1.57e-49!115;UBERON:0000033!4.37e-45!123;UBERON:0001950!2.96e-43!20;UBERON:0000153!1.22e-42!129;UBERON:0007811!1.22e-42!129;UBERON:0004121!3.61e-36!169;UBERON:0000924!3.76e-35!173;UBERON:0006601!3.76e-35!173;UBERON:0002420!4.36e-30!9;UBERON:0007245!4.36e-30!9;UBERON:0010009!4.36e-30!9;UBERON:0010011!4.36e-30!9;UBERON:0000454!4.36e-30!9;UBERON:0002308!9.02e-30!9;UBERON:0000125!9.02e-30!9;UBERON:0000349!1.51e-22!5;UBERON:0000025!2.25e-22!194;UBERON:0009663!1.16e-21!7;UBERON:0001871!3.05e-19!7;UBERON:0000200!5.02e-18!6;UBERON:0000369!5.48e-18!4;UBERON:0002435!5.48e-18!4;UBERON:0000204!5.48e-18!4;UBERON:0010082!5.48e-18!4;UBERON:0003076!3.40e-17!15;UBERON:0003057!3.40e-17!15;UBERON:0004111!1.91e-16!241;UBERON:0002021!4.84e-14!5;UBERON:0005383!5.37e-14!3;UBERON:0005382!5.37e-14!3;UBERON:0006331!9.47e-14!3;UBERON:0000988!1.08e-13!3;UBERON:0000477!1.17e-13!286;UBERON:0002771!1.18e-13!3;UBERON:0002298!2.41e-13!8;UBERON:0000483!6.95e-13!309;UBERON:0000064!8.45e-13!219;UBERON:0000119!1.11e-12!312;UBERON:0004733!1.60e-12!12;UBERON:0002028!1.60e-12!12;UBERON:0007277!1.60e-12!12;UBERON:0000475!2.29e-12!365;UBERON:0002680!7.15e-12!9;UBERON:0001895!7.15e-12!9;UBERON:0010092!7.15e-12!9;UBERON:0004732!1.64e-11!13;UBERON:0001876!2.11e-10!2;UBERON:0002148!4.96e-10!2;UBERON:0009662!4.96e-10!2;UBERON:0001954!6.77e-10!2;UBERON:0003022!6.77e-10!2;UBERON:0002421!6.77e-10!2;UBERON:0002600!6.77e-10!2;UBERON:0001873!7.07e-10!2;UBERON:0010122!7.07e-10!2;UBERON:0001872!1.09e-08!5;UBERON:0000062!1.51e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003112;2.39e-66;1!UBERON:0011158;2.39e-66;1!UBERON:0003128;2.39e-66;1!UBERON:0001703;2.39e-66;1!UBERON:0002241;2.39e-66;1!UBERON:0011159;1.60e-14;5!UBERON:0003129;8.99e-11;7!UBERON:0011137;2.47e-07;11!UBERON:0010323;2.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003112,2.39e-66,1;UBERON:0011158,2.39e-66,1;UBERON:0003128,2.39e-66,1;UBERON:0001703,2.39e-66,1;UBERON:0002241,2.39e-66,1;UBERON:0004761,2.39e-66,1;UBERON:0009617,2.39e-66,1;UBERON:0005253,5.04e-34,2;UBERON:0011159,1.60e-14,5;UBERON:0003129,8.99e-11,7;UBERON:0010323,2.47e-07,11 | |||
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|short_description=p@chr19:46928841..46928843,- | |||
}} |
Revision as of 21:23, 11 September 2013
Short description: | p@chr19:46928841..46928843, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:46928841..46928843, - |
Coexpression cluster: | C2130_brain_putamen_temporal_diencephalon_caudate_amygdala_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
olfactory region | 2.39e-66 | 1 |
primary subdivision of skull | 2.39e-66 | 1 |
cranium | 2.39e-66 | 1 |
neurocranium | 2.39e-66 | 1 |
chondrocranium | 2.39e-66 | 1 |
cartilaginous neurocranium | 2.39e-66 | 1 |
head paraxial mesoderm | 2.39e-66 | 1 |
head mesenchyme | 5.04e-34 | 2 |
primary subdivision of cranial skeletal system | 1.60e-14 | 5 |
skull | 8.99e-11 | 7 |
cranial skeletal system | 2.47e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.