FFCP PHASE1:Hg19::chr19:959145..959162,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1459|description=CAGE_peak_at_chr19:959145..959162,+|id=chr19:959145..959162,+|ontology_enrichment_celltype=CL:0000349!6.57e-08!3;CL:0002577!6.57e-08!3;CL:0002057!1.56e-07!42;CL:0000860!8.49e-07!45|ontology_enrichment_celltype_v019=CL:0000349;1.71e-22;19!CL:0002577;1.56e-17;3!CL:0002536;1.16e-11;2!CL:0002537;4.33e-11;5|ontology_enrichment_celltype_v019_2=CL:0000349,1.50e-22,19;CL:0002577,1.60e-17,3;CL:0002536,8.58e-12,2;CL:0002537,4.33e-11,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1036;8.00e-11;8!DOID:1799;5.11e-07;1!DOID:10165;5.11e-07;1!DOID:1798;5.11e-07;1|ontology_enrichment_disease_v019_2=DOID:1036,7.90e-11,8;DOID:1799,4.97e-07,1;DOID:10165,4.97e-07,1;DOID:1798,4.97e-07,1|ontology_enrichment_uberon=UBERON:0005631!3.15e-18!14;UBERON:0000158!3.15e-18!14;UBERON:0003124!1.62e-11!7;UBERON:0001987!9.40e-10!4;UBERON:0004340!9.40e-10!4;UBERON:0000478!2.00e-09!24;UBERON:0000305!1.73e-08!7;UBERON:0004871!2.39e-07!8|ontology_enrichment_uberon_v019=UBERON:0000305;5.66e-20;7!UBERON:0005631;8.00e-20;10!UBERON:0000158;8.00e-20;10!UBERON:0000478;1.75e-17;24!UBERON:0000160;1.49e-14;17!UBERON:0005409;1.69e-14;22!UBERON:0001987;2.78e-13;4!UBERON:0001052;3.21e-13;4!UBERON:0004907;1.13e-10;5!UBERON:0004921;1.07e-08;33!UBERON:0000059;2.00e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.75e-31,14;UBERON:0000158,3.75e-31,14;UBERON:0000305,4.57e-20,7;UBERON:0004871,1.56e-17,8;UBERON:0000478,1.58e-17,24;UBERON:0000160,1.60e-14,17;UBERON:0001987,2.84e-13,4;UBERON:0004340,2.84e-13,4;UBERON:0001052,3.64e-13,4;UBERON:0003124,3.85e-13,7;UBERON:0005409,1.17e-12,25;UBERON:0004907,1.25e-10,5;UBERON:0004923,1.03e-09,66;UBERON:0000059,2.12e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,1.96597234917155,2.11013582582763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85779347979291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.697287110717054,0,0.309706370895104,0.28769239232215,1.5369642391746,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0.962787081228281,0.639337125799041,0,0,0,0.290209238628584,0.56738522469114,0,1.50749199154046,4.17186334736161,1.3031330682307,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,31.6080287055802,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,8.48757200049526,6.65741758041988,5.14063498660456,0,0,0,0,0,0,0,0,0,0,0,0,7.25156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61928026063815,0,0,0,0,0,0,0,0,0,51.3300642186034,36.2296910615819,53.7531228673656,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0.23056390438806,0.0897576444097721,0.325942115766024,20.4160742228428,0,0.533034776018635,0,0,0,1.1279783030859,1.37243774022418,1.84603745673427,4.17458211993207,0,0,0,1.27217764290547,0,0,0,84.9331901457739,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,0,0.551482276150566,0.0824158583811665,0.808842526250219,0,0,0,0,0,0,0,0,2.32140586367385,0.242998226632099,0,0,0.209818352539992,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,1.73357847366573,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,8.90482761236836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975726071789027,0,0,0,0,0,0,0,0,9.52925355266883,80.3579674048356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1459 | |||
|description=CAGE_peak_at_chr19:959145..959162,+ | |||
|id=chr19:959145..959162,+ | |||
|ontology_enrichment_celltype=CL:0000349!6.57e-08!3;CL:0002577!6.57e-08!3;CL:0002057!1.56e-07!42;CL:0000860!8.49e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.71e-22;19!CL:0002577;1.56e-17;3!CL:0002536;1.16e-11;2!CL:0002537;4.33e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.50e-22,19;CL:0002577,1.60e-17,3;CL:0002536,8.58e-12,2;CL:0002537,4.33e-11,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;8.00e-11;8!DOID:1799;5.11e-07;1!DOID:10165;5.11e-07;1!DOID:1798;5.11e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.90e-11,8;DOID:1799,4.97e-07,1;DOID:10165,4.97e-07,1;DOID:1798,4.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.15e-18!14;UBERON:0000158!3.15e-18!14;UBERON:0003124!1.62e-11!7;UBERON:0001987!9.40e-10!4;UBERON:0004340!9.40e-10!4;UBERON:0000478!2.00e-09!24;UBERON:0000305!1.73e-08!7;UBERON:0004871!2.39e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;5.66e-20;7!UBERON:0005631;8.00e-20;10!UBERON:0000158;8.00e-20;10!UBERON:0000478;1.75e-17;24!UBERON:0000160;1.49e-14;17!UBERON:0005409;1.69e-14;22!UBERON:0001987;2.78e-13;4!UBERON:0001052;3.21e-13;4!UBERON:0004907;1.13e-10;5!UBERON:0004921;1.07e-08;33!UBERON:0000059;2.00e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.75e-31,14;UBERON:0000158,3.75e-31,14;UBERON:0000305,4.57e-20,7;UBERON:0004871,1.56e-17,8;UBERON:0000478,1.58e-17,24;UBERON:0000160,1.60e-14,17;UBERON:0001987,2.84e-13,4;UBERON:0004340,2.84e-13,4;UBERON:0001052,3.64e-13,4;UBERON:0003124,3.85e-13,7;UBERON:0005409,1.17e-12,25;UBERON:0004907,1.25e-10,5;UBERON:0004923,1.03e-09,66;UBERON:0000059,2.12e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,1.96597234917155,2.11013582582763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85779347979291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.697287110717054,0,0.309706370895104,0.28769239232215,1.5369642391746,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0.962787081228281,0.639337125799041,0,0,0,0.290209238628584,0.56738522469114,0,1.50749199154046,4.17186334736161,1.3031330682307,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,31.6080287055802,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,8.48757200049526,6.65741758041988,5.14063498660456,0,0,0,0,0,0,0,0,0,0,0,0,7.25156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61928026063815,0,0,0,0,0,0,0,0,0,51.3300642186034,36.2296910615819,53.7531228673656,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0.23056390438806,0.0897576444097721,0.325942115766024,20.4160742228428,0,0.533034776018635,0,0,0,1.1279783030859,1.37243774022418,1.84603745673427,4.17458211993207,0,0,0,1.27217764290547,0,0,0,84.9331901457739,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,0,0.551482276150566,0.0824158583811665,0.808842526250219,0,0,0,0,0,0,0,0,2.32140586367385,0.242998226632099,0,0,0.209818352539992,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,1.73357847366573,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,8.90482761236836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975726071789027,0,0,0,0,0,0,0,0,9.52925355266883,80.3579674048356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,24.4786707764432,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,3.65168194123259,0,0,0,0.135982980381829,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.286888821570705,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr19:959145..959162,+ | |||
}} |
Revision as of 23:04, 11 September 2013
Short description: | p@chr19:959145..959162, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:959145..959162, + |
Coexpression cluster: | C1459_rectum_colon_amniotic_Intestinal_small_chorionic_pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.50e-22 | 19 |
placental epithelial cell | 1.60e-17 | 3 |
amniotic epithelial cell | 8.58e-12 | 2 |
amnion mesenchymal stem cell | 4.33e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.75e-31 | 14 |
membranous layer | 3.75e-31 | 14 |
amnion | 4.57e-20 | 7 |
somatic layer of lateral plate mesoderm | 1.56e-17 | 8 |
extraembryonic structure | 1.58e-17 | 24 |
intestine | 1.60e-14 | 17 |
placenta | 2.84e-13 | 4 |
allantois | 2.84e-13 | 4 |
rectum | 3.64e-13 | 4 |
chorion | 3.85e-13 | 7 |
gastrointestinal system | 1.17e-12 | 25 |
lower digestive tract | 1.25e-10 | 5 |
organ component layer | 1.03e-09 | 66 |
large intestine | 2.12e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.90e-11 | 8 |
islet cell tumor | 4.97e-07 | 1 |
endocrine pancreas cancer | 4.97e-07 | 1 |
pancreatic endocrine carcinoma | 4.97e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.