FFCP PHASE1:Hg19::chr1:223853431..223853436,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=388743|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1485|TSSclassifier=S|UniProt=B1B153,A6NHC0|association_with_transcript=0bp_to_ENST00000419193,NM_001143962,uc009xee.2_5end|coexpression_cluster_id=C94|description=CAGE_peak_4_at_CAPN8_5end|id=chr1:223853431..223853436,-|ontology_enrichment_celltype=CL:0002178!1.92e-08!3;CL:0002553!5.75e-07!1|ontology_enrichment_celltype_v019=CL:0002178;3.66e-23;3|ontology_enrichment_celltype_v019_2=CL:0002178,3.27e-23,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.48e-12!106;DOID:3493!3.37e-12!2;DOID:1324!1.37e-08!15;DOID:0050687!3.75e-08!143;DOID:0050615!4.90e-08!16|ontology_enrichment_disease_v019=DOID:3493;5.96e-34;2!DOID:3119;6.18e-20;14|ontology_enrichment_disease_v019_2=DOID:3493,5.04e-34,2;DOID:3119,5.89e-20,14|ontology_enrichment_uberon=UBERON:0005153!4.78e-15!37;UBERON:0004921!4.80e-15!129;UBERON:0004185!4.80e-15!129;UBERON:0000077!4.88e-15!130;UBERON:0000915!1.62e-14!52;UBERON:0001007!1.64e-14!155;UBERON:0001555!1.64e-14!155;UBERON:0007026!1.64e-14!155;UBERON:0002048!3.30e-14!22;UBERON:0000117!3.30e-14!22;UBERON:0000171!3.30e-14!22;UBERON:0000170!3.30e-14!22;UBERON:0005597!3.30e-14!22;UBERON:0000118!3.30e-14!22;UBERON:0005178!1.08e-13!34;UBERON:0002224!1.08e-13!34;UBERON:0005181!2.99e-13!35;UBERON:0004119!6.90e-13!169;UBERON:0000925!6.90e-13!169;UBERON:0006595!6.90e-13!169;UBERON:0002294!1.81e-12!7;UBERON:0001173!1.81e-12!7;UBERON:0004912!1.81e-12!7;UBERON:0005157!2.40e-10!51;UBERON:0008947!8.62e-10!38;UBERON:0003258!8.62e-10!38;UBERON:0009569!9.48e-10!113;UBERON:0005911!1.08e-09!82;UBERON:0001041!4.98e-09!98;UBERON:0002110!3.68e-08!3;UBERON:0006242!3.68e-08!3;UBERON:0005177!7.61e-08!107;UBERON:0003104!1.17e-07!238;UBERON:0009142!1.17e-07!238;UBERON:0002100!5.10e-07!216;UBERON:0001154!5.43e-07!1;UBERON:0001153!5.43e-07!1;UBERON:0006122!6.43e-07!1;UBERON:0001046!6.72e-07!19;UBERON:0000945!7.90e-07!8;UBERON:0010039!7.90e-07!8;UBERON:0002171!8.49e-07!1;UBERON:0006518!8.49e-07!1;UBERON:0008949!8.49e-07!1;UBERON:0000101!8.49e-07!1;UBERON:0002167!8.49e-07!1|ontology_enrichment_uberon_v019=UBERON:0002114;3.66e-23;2!UBERON:0002108;1.71e-14;4!UBERON:0000945;1.71e-14;5!UBERON:0010039;1.71e-14;5!UBERON:0005409;1.41e-12;22!UBERON:0004921;2.59e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0002114,4.09e-23,2;UBERON:0002108,1.83e-14,4;UBERON:0005409,2.91e-11,25;UBERON:0000945,1.35e-09,8;UBERON:0010039,1.35e-09,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0.179736702294654,0.358042349351218,0,0.295930216910801,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0.640358984218058,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0.156986185701028,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57040373784389,0.365753774946808,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,4.23285566725371,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@CAPN8}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=388743 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1485 | |||
|TSSclassifier=S | |||
|UniProt=B1B153,A6NHC0 | |||
|association_with_transcript=0bp_to_ENST00000419193,NM_001143962,uc009xee.2_5end | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_4_at_CAPN8_5end | |||
|id=chr1:223853431..223853436,- | |||
|ontology_enrichment_celltype=CL:0002178!1.92e-08!3;CL:0002553!5.75e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002178;3.66e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,3.27e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.48e-12!106;DOID:3493!3.37e-12!2;DOID:1324!1.37e-08!15;DOID:0050687!3.75e-08!143;DOID:0050615!4.90e-08!16 | |||
|ontology_enrichment_disease_v019=DOID:3493;5.96e-34;2!DOID:3119;6.18e-20;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.04e-34,2;DOID:3119,5.89e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0005153!4.78e-15!37;UBERON:0004921!4.80e-15!129;UBERON:0004185!4.80e-15!129;UBERON:0000077!4.88e-15!130;UBERON:0000915!1.62e-14!52;UBERON:0001007!1.64e-14!155;UBERON:0001555!1.64e-14!155;UBERON:0007026!1.64e-14!155;UBERON:0002048!3.30e-14!22;UBERON:0000117!3.30e-14!22;UBERON:0000171!3.30e-14!22;UBERON:0000170!3.30e-14!22;UBERON:0005597!3.30e-14!22;UBERON:0000118!3.30e-14!22;UBERON:0005178!1.08e-13!34;UBERON:0002224!1.08e-13!34;UBERON:0005181!2.99e-13!35;UBERON:0004119!6.90e-13!169;UBERON:0000925!6.90e-13!169;UBERON:0006595!6.90e-13!169;UBERON:0002294!1.81e-12!7;UBERON:0001173!1.81e-12!7;UBERON:0004912!1.81e-12!7;UBERON:0005157!2.40e-10!51;UBERON:0008947!8.62e-10!38;UBERON:0003258!8.62e-10!38;UBERON:0009569!9.48e-10!113;UBERON:0005911!1.08e-09!82;UBERON:0001041!4.98e-09!98;UBERON:0002110!3.68e-08!3;UBERON:0006242!3.68e-08!3;UBERON:0005177!7.61e-08!107;UBERON:0003104!1.17e-07!238;UBERON:0009142!1.17e-07!238;UBERON:0002100!5.10e-07!216;UBERON:0001154!5.43e-07!1;UBERON:0001153!5.43e-07!1;UBERON:0006122!6.43e-07!1;UBERON:0001046!6.72e-07!19;UBERON:0000945!7.90e-07!8;UBERON:0010039!7.90e-07!8;UBERON:0002171!8.49e-07!1;UBERON:0006518!8.49e-07!1;UBERON:0008949!8.49e-07!1;UBERON:0000101!8.49e-07!1;UBERON:0002167!8.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;3.66e-23;2!UBERON:0002108;1.71e-14;4!UBERON:0000945;1.71e-14;5!UBERON:0010039;1.71e-14;5!UBERON:0005409;1.41e-12;22!UBERON:0004921;2.59e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,4.09e-23,2;UBERON:0002108,1.83e-14,4;UBERON:0005409,2.91e-11,25;UBERON:0000945,1.35e-09,8;UBERON:0010039,1.35e-09,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0.179736702294654,0.358042349351218,0,0.295930216910801,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0.640358984218058,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0.156986185701028,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57040373784389,0.365753774946808,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,4.23285566725371,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@CAPN8 | |||
}} |
Revision as of 03:51, 12 September 2013
Short description: | p4@CAPN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CAPN8_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000419193, NM_001143962, uc009xee.2_5end |
EntrezGene: | CAPN8 |
HGNC: | 1485 |
UniProt: | B1B153A6NHC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 3.27e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
duodenum | 4.09e-23 | 2 |
small intestine | 1.83e-14 | 4 |
gastrointestinal system | 2.91e-11 | 25 |
stomach | 1.35e-09 | 8 |
food storage organ | 1.35e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.04e-34 | 2 |
gastrointestinal system cancer | 5.89e-20 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.