FFCP PHASE1:Hg19::chr1:28269913..28269921,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1333|description=CAGE_peak_at_chr1:28269913..28269921,-|id=chr1:28269913..28269921,-|ontology_enrichment_celltype=CL:0002057!2.62e-55!42;CL:0000860!2.51e-51!45;CL:0000766!4.00e-45!76;CL:0002194!8.98e-35!63;CL:0000576!8.98e-35!63;CL:0000040!8.98e-35!63;CL:0000559!8.98e-35!63;CL:0002009!1.39e-33!65;CL:0000839!6.62e-31!70;CL:0000557!2.05e-30!71;CL:0000763!4.56e-29!112;CL:0000049!4.56e-29!112;CL:0000738!3.29e-24!140;CL:0002032!9.68e-20!165;CL:0000837!9.68e-20!165;CL:0000775!9.18e-19!3;CL:0000037!1.01e-18!172;CL:0000566!1.01e-18!172;CL:0000094!1.94e-18!8;CL:0002087!2.87e-18!119;CL:0000988!2.13e-17!182;CL:0002031!2.37e-17!124;CL:0000081!2.37e-13!11|ontology_enrichment_celltype_v019=CL:0000775;1.59e-27;3!CL:0000094;4.10e-23;8!CL:0000081;5.12e-17;11!CL:0000771;2.23e-11;2|ontology_enrichment_celltype_v019_2=CL:0000775,1.59e-27,3;CL:0000094,3.80e-23,8;CL:0000081,4.85e-17,11;CL:0000771,2.02e-11,2;CL:0000766,8.99e-10,72|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.56e-38!102;UBERON:0003061!2.56e-38!102;UBERON:0002193!1.94e-34!112;UBERON:0002371!1.54e-26!80;UBERON:0001474!2.11e-24!86;UBERON:0004765!3.70e-20!101;UBERON:0001434!3.70e-20!101;UBERON:0000178!1.38e-18!15;UBERON:0000179!1.38e-18!15;UBERON:0000463!1.38e-18!15;UBERON:0002405!3.45e-17!115;UBERON:0003081!3.00e-15!216;UBERON:0002204!1.67e-10!167|ontology_enrichment_uberon_v019=UBERON:0000178;2.82e-21;15!UBERON:0000179;2.82e-21;15!UBERON:0000463;2.82e-21;15!UBERON:0002390;2.04e-10;32!UBERON:0002193;1.84e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.54e-21,15;UBERON:0000179,2.54e-21,15;UBERON:0000463,2.54e-21,15;UBERON:0002390,1.50e-09,98;UBERON:0003061,1.50e-09,98;UBERON:0002193,1.20e-08,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0.863077176966451,0.256160706529101,3.07426898855161,0,0,0,0.188242339542605,0,0.674170453335254,0.306083892370903,0,0.639337125799041,0.329851300186716,0.797854630486527,1.27867425159808,0.290209238628584,0.56738522469114,0,0.502497330513487,0.521482918420201,4.77815458351257,0,0,0.316462387440884,0,0,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,2.99161459204025,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,1.70894156152249,0.476463550915578,0.822724546172388,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:28269913..28269921,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1333 | |||
|description=CAGE_peak_at_chr1:28269913..28269921,- | |||
|id=chr1:28269913..28269921,- | |||
|ontology_enrichment_celltype=CL:0002057!2.62e-55!42;CL:0000860!2.51e-51!45;CL:0000766!4.00e-45!76;CL:0002194!8.98e-35!63;CL:0000576!8.98e-35!63;CL:0000040!8.98e-35!63;CL:0000559!8.98e-35!63;CL:0002009!1.39e-33!65;CL:0000839!6.62e-31!70;CL:0000557!2.05e-30!71;CL:0000763!4.56e-29!112;CL:0000049!4.56e-29!112;CL:0000738!3.29e-24!140;CL:0002032!9.68e-20!165;CL:0000837!9.68e-20!165;CL:0000775!9.18e-19!3;CL:0000037!1.01e-18!172;CL:0000566!1.01e-18!172;CL:0000094!1.94e-18!8;CL:0002087!2.87e-18!119;CL:0000988!2.13e-17!182;CL:0002031!2.37e-17!124;CL:0000081!2.37e-13!11 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.59e-27;3!CL:0000094;4.10e-23;8!CL:0000081;5.12e-17;11!CL:0000771;2.23e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.59e-27,3;CL:0000094,3.80e-23,8;CL:0000081,4.85e-17,11;CL:0000771,2.02e-11,2;CL:0000766,8.99e-10,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.56e-38!102;UBERON:0003061!2.56e-38!102;UBERON:0002193!1.94e-34!112;UBERON:0002371!1.54e-26!80;UBERON:0001474!2.11e-24!86;UBERON:0004765!3.70e-20!101;UBERON:0001434!3.70e-20!101;UBERON:0000178!1.38e-18!15;UBERON:0000179!1.38e-18!15;UBERON:0000463!1.38e-18!15;UBERON:0002405!3.45e-17!115;UBERON:0003081!3.00e-15!216;UBERON:0002204!1.67e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.82e-21;15!UBERON:0000179;2.82e-21;15!UBERON:0000463;2.82e-21;15!UBERON:0002390;2.04e-10;32!UBERON:0002193;1.84e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.54e-21,15;UBERON:0000179,2.54e-21,15;UBERON:0000463,2.54e-21,15;UBERON:0002390,1.50e-09,98;UBERON:0003061,1.50e-09,98;UBERON:0002193,1.20e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0.863077176966451,0.256160706529101,3.07426898855161,0,0,0,0.188242339542605,0,0.674170453335254,0.306083892370903,0,0.639337125799041,0.329851300186716,0.797854630486527,1.27867425159808,0.290209238628584,0.56738522469114,0,0.502497330513487,0.521482918420201,4.77815458351257,0,0,0.316462387440884,0,0,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,2.99161459204025,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,1.70894156152249,0.476463550915578,0.822724546172388,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:28269913..28269921,- | |||
}} |
Revision as of 05:06, 12 September 2013
Short description: | p@chr1:28269913..28269921, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:28269913..28269921, - |
Coexpression cluster: | C1333_Eosinophils_CD14_Neutrophils_Whole_Basophils_Peripheral_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.59e-27 | 3 |
granulocyte | 3.80e-23 | 8 |
blood cell | 4.85e-17 | 11 |
eosinophil | 2.02e-11 | 2 |
myeloid leukocyte | 8.99e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 2.54e-21 | 15 |
haemolymphatic fluid | 2.54e-21 | 15 |
organism substance | 2.54e-21 | 15 |
hematopoietic system | 1.50e-09 | 98 |
blood island | 1.50e-09 | 98 |
hemolymphoid system | 1.20e-08 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.