FFCP PHASE1:Hg19::chr1:45965959..45966027,+: Difference between revisions
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{{FFCP | 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520940089,6.05191958746624,7.8626363723139,8.60205180638018,8.02986068762783,9.19942020932677,28.3800000986415,16.5326380474383,10.215287164203,27.2476806372724,13.7081917565056,15.5519315008243,21.7420431216208,9.91988264849473,46.5507187893453,28.2852962917316,34.2859710507131,19.5568926493548,23.0520521521744,20.66986196501,7.31410006502863,13.8796671202206,13.609702720853,5.99549104274163,6.124909547064,30.5731111459147,24.0884179753494,16.2826536238294,25.6395455300944,13.3597998997511,34.7860979895016,22.6065903884592,9.99385941814081,13.2499419976385,18.0493676722043,24.9462893989483,12.3612462780862,9.53455238667918,37.9697959333055,26.8536899856971,16.8471135502336,24.809723450533,26.5714763819251,11.785801251664,16.3771917510097,6.2099556211159,30.797138585988,24.2134210570293,16.5349437200947,34.2445375047097,14.7683198434919,39.4745592137171,10.4204347461752,6.50723604130596,13.0317676192387,11.249738553444,12.1062139998777,9.71144966778611,18.2129753081038,6.20916591138472,17.4003321209227,9.77481653793285,26.1683471960802,33.2152506492388,21.6294728817662,9.78836336650208,12.4804017632317,16.1829057613482,16.5360576355136,8.21842848458546,20.7290487569877,5.25526856675755,14.6526915562146,20.0677286900563,23.3645264989932,22.2538588547302,6.41369091784202,16.991725461369,17.071847709395,10.3688949272114,40.0111443702858,14.5548360898595,17.6391747851456,22.8629007103102,9.164274741762,7.44495325594368,13.3775451456841,14.541206133713,13.6428824725188,14.020561372961,13.5960055809458,14.7834441872996,33.6346185088078,11.6570638334193,11.9309126365674,21.088782167105,23.9029382462913,15.2477210752596,24.1869136839944,27.1733118420012,11.6532978742996,15.0806096747731,11.2876151126765,4.6578181133242,18.6184472210285,14.9194435007358,10.9907168121022,13.9476390102522,9.17606419314211,9.86831138788463,10.2488041877988,21.08758390016,7.49926542143762,15.8802692272061,28.0042369745197,3.65168194123259,16.972983485968,16.4840520624169,17.8281865278299,33.5198046641209,10.4724165681691,11.1095636508234,13.0198256358363,7.39481005810269,9.95041092884715,13.6259738821885,43.9247599294056,14.3169306142924,15.1963356315553,16.5674791264648,17.3681360120857,9.77759403240263,11.8972556202636,16.3458119395269,28.1917609415985,18.2042072716936,14.2866767873657,10.7128994158683,11.3676481311371,7.57311514409466,35.3215367128932,8.78330784238676,9.70162506999453,11.9744211343329,13.0048654412407,10.776328482334,11.7624416843989,8.64916927019635,24.0953675088485,33.4056592597249,1.9307228228694,9.07234541276527,11.7320471201727,15.0356976344926,13.0206777061036,3.32878387092756,12.0764276154616,12.5021711998261|short_description=p1@MMACHC}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=25974 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24525 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y4U1 | |||
|association_with_transcript=103bp_to_NM_015506,uc001cny.2,uc009vxv.2_5end | |||
|description=CAGE_peak_1_at_MMACHC_5end | |||
|id=chr1:45965959..45966027,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019=DOID:8692;1.21e-07;31!DOID:1240;3.27e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.18e-12,235;DOID:14566,2.59e-12,239;DOID:2531,3.36e-10,51;DOID:0060083,3.36e-10,51;DOID:1240,1.75e-08,39;DOID:8692,7.45e-08,31;DOID:0050687,9.92e-08,143;DOID:0050686,3.53e-07,137;DOID:305,5.79e-07,106 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;9.84e-08;34!UBERON:0001869;2.42e-07;32!UBERON:0002791;5.08e-07;32!UBERON:0003528;5.58e-07;34!UBERON:0002020;5.58e-07;34 | |||
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| |||
|short_description=p1@MMACHC | |||
}} |
Revision as of 05:56, 12 September 2013
Short description: | p1@MMACHC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MMACHC_5end |
Coexpression cluster: | NA |
Association with transcript: | 103bp_to_NM_015506, uc001cny.2, uc009vxv.2_5end |
EntrezGene: | MMACHC |
HGNC: | 24525 |
UniProt: | Q9Y4U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 8.96e-12 | 171 |
ectoderm | 8.96e-12 | 171 |
presumptive ectoderm | 8.96e-12 | 171 |
neurectoderm | 9.31e-12 | 86 |
organ system subdivision | 1.77e-11 | 223 |
neural plate | 2.60e-11 | 82 |
presumptive neural plate | 2.60e-11 | 82 |
pre-chordal neural plate | 3.01e-11 | 61 |
ecto-epithelium | 4.25e-11 | 104 |
regional part of nervous system | 2.66e-10 | 53 |
regional part of brain | 2.66e-10 | 53 |
neural tube | 5.18e-10 | 56 |
neural rod | 5.18e-10 | 56 |
future spinal cord | 5.18e-10 | 56 |
neural keel | 5.18e-10 | 56 |
cell layer | 2.13e-09 | 309 |
nervous system | 3.19e-09 | 89 |
structure with developmental contribution from neural crest | 4.37e-09 | 132 |
brain | 6.35e-09 | 68 |
future brain | 6.35e-09 | 68 |
regional part of forebrain | 6.68e-09 | 41 |
forebrain | 6.68e-09 | 41 |
anterior neural tube | 6.68e-09 | 41 |
future forebrain | 6.68e-09 | 41 |
epithelium | 9.29e-09 | 306 |
central nervous system | 1.26e-08 | 81 |
telencephalon | 1.56e-08 | 34 |
cerebral hemisphere | 5.58e-08 | 32 |
brain grey matter | 9.21e-08 | 34 |
gray matter | 9.21e-08 | 34 |
regional part of telencephalon | 1.25e-07 | 32 |
trunk region element | 1.73e-07 | 101 |
primordium | 5.35e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.18e-12 | 235 |
disease of cellular proliferation | 2.59e-12 | 239 |
hematologic cancer | 3.36e-10 | 51 |
immune system cancer | 3.36e-10 | 51 |
leukemia | 1.75e-08 | 39 |
myeloid leukemia | 7.45e-08 | 31 |
cell type cancer | 9.92e-08 | 143 |
organ system cancer | 3.53e-07 | 137 |
carcinoma | 5.79e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.