FFCP PHASE1:Hg19::chr21:45661307..45661319,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23308|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17087|TSSclassifier=S|UniProt=A8MUZ1|association_with_transcript=-458bp_to_ENST00000400377_5end|coexpression_cluster_id=C179|description=CAGE_peak_4_at_ICOSLG_5end|id=chr21:45661307..45661319,-|ontology_enrichment_celltype=CL:0000738!3.46e-21!140;CL:0002087!1.88e-20!119;CL:0002031!1.16e-17!124;CL:0000945!8.84e-17!24;CL:0000826!8.84e-17!24;CL:0000037!2.02e-16!172;CL:0000566!2.02e-16!172;CL:0000988!1.10e-15!182;CL:0002032!7.79e-15!165;CL:0000837!7.79e-15!165;CL:0000236!3.67e-12!14;CL:0000860!3.05e-11!45;CL:0000542!4.53e-11!53;CL:0000051!4.53e-11!53;CL:0002057!9.17e-11!42;CL:0000838!1.40e-10!52;CL:0002009!2.45e-09!65;CL:0002194!1.09e-08!63;CL:0000576!1.09e-08!63;CL:0000040!1.09e-08!63;CL:0000559!1.09e-08!63;CL:0000557!2.30e-08!71;CL:0000766!1.79e-07!76;CL:0000839!1.84e-07!70|ontology_enrichment_celltype_v019=CL:0000945;1.78e-31;24!CL:0000236;3.66e-21;13!CL:0000542;5.90e-15;53!CL:0000624;2.39e-09;6!CL:0000784;7.31e-08;3!CL:0002087;3.54e-07;104|ontology_enrichment_celltype_v019_2=CL:0000945,9.92e-32,24;CL:0000826,9.92e-32,24;CL:0000542,8.57e-27,53;CL:0000051,8.57e-27,53;CL:0000838,1.71e-25,52;CL:0000236,3.89e-23,14;CL:0002087,1.49e-22,115;CL:0000738,5.39e-22,136;CL:0002031,9.03e-19,120;CL:0000988,7.13e-17,177;CL:0000037,1.84e-16,168;CL:0002032,7.79e-14,161;CL:0000837,7.79e-14,161;CL:0000624,2.19e-09,6;CL:0000784,1.19e-07,3|ontology_enrichment_development_v019=CL:0000051;5.90e-15;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.22e-07!112;UBERON:0002390!8.15e-07!102;UBERON:0003061!8.15e-07!102|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,2.90370941842215,3.28402357799783,3.46327437780189,0.393364276848904,0,0.309632246632152,0,0,0,2.01414721508784,1.70603078984906,0,1.10799081706375,0.601633342410425,0.868043482863407,0,0,0,0,1.13362783106643,0.242584061187816,0.232429036905685,1.23350366406548,1.23882548358041,1.1507695692886,1.5369642391746,0.945928919554341,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0.272906150057846,1.12361742222542,0.612167784741805,0.641858054152187,0.639337125799041,0.659702600373432,1.19678194572979,0,0.290209238628584,1.13477044938228,0.622822248995575,0.251248665256743,3.65038042894141,0.65156653411535,0,0.736555271975129,0.316462387440884,0,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0,3.51992488922645,3.27683166757279,1.77901850772711,1.70692089026603,6.4063357925762,2.87376219977242,6.61044872784862,3.81621501814146,13.0918982895173,15.8554041130153,22.9363936875137,1.32171328579026,1.68152568894461,0.526768169550154,1.180258620683,1.57204305099666,1.43921049299656,0,4.88883399950386,6.15482147455153,3.89653456815823,0,2.3568472597987,2.87994062958707,2.70803863765016,0.640456598628376,0.130059347559878,0,0,0,0.889719378972363,0.535081656179426,0,0,0.383220493601921,1.37450978193052,0,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0.370784442784429,0.649094787309367,0,0.531831842075461,3.81584998888547,3.43196946468077,1.11437250398869,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,1.46437234528902,0.367663080345869,0.81014194788176,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,1.59035721985782,1.16193942869518,0.932949495138334,1.51392510525377,1.09493207722749,0,0.643240938192885,0,0,0,0.236613600079688,0.842923450390509,0.241011029883482,0.220587945464788,0.217879444092406,0.71181185733329,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.737930631258681,0,0.329250856225877,0,0,0,0,0,0,0.115930404975077,0,1.87676382089396,1.85194205030644,1.71228737011138,1.58040879591855,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,1.20575750823834,2.61460037580088,1.09970290300263,0,0,0,0,0,0,0,0,0.179060963239896,0,0,1.2937654491571,1.28343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,2.74121620447837,0.686286847621712,1.03384013061444,2.15714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,1.32945394550784,0.200506470303285,0,0,0,0,1.35359883872224,0.462092022626489,0,0,0.211103257785751,0,0,0,0,0,1.00337954770971,1.01950509218015,2.49322802678617,0.671624264166535,0,0,0,0,0,0.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23308 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17087 | |||
|TSSclassifier=S | |||
|UniProt=A8MUZ1 | |||
|association_with_transcript=-458bp_to_ENST00000400377_5end | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_4_at_ICOSLG_5end | |||
|id=chr21:45661307..45661319,- | |||
|ontology_enrichment_celltype=CL:0000738!3.46e-21!140;CL:0002087!1.88e-20!119;CL:0002031!1.16e-17!124;CL:0000945!8.84e-17!24;CL:0000826!8.84e-17!24;CL:0000037!2.02e-16!172;CL:0000566!2.02e-16!172;CL:0000988!1.10e-15!182;CL:0002032!7.79e-15!165;CL:0000837!7.79e-15!165;CL:0000236!3.67e-12!14;CL:0000860!3.05e-11!45;CL:0000542!4.53e-11!53;CL:0000051!4.53e-11!53;CL:0002057!9.17e-11!42;CL:0000838!1.40e-10!52;CL:0002009!2.45e-09!65;CL:0002194!1.09e-08!63;CL:0000576!1.09e-08!63;CL:0000040!1.09e-08!63;CL:0000559!1.09e-08!63;CL:0000557!2.30e-08!71;CL:0000766!1.79e-07!76;CL:0000839!1.84e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.78e-31;24!CL:0000236;3.66e-21;13!CL:0000542;5.90e-15;53!CL:0000624;2.39e-09;6!CL:0000784;7.31e-08;3!CL:0002087;3.54e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.92e-32,24;CL:0000826,9.92e-32,24;CL:0000542,8.57e-27,53;CL:0000051,8.57e-27,53;CL:0000838,1.71e-25,52;CL:0000236,3.89e-23,14;CL:0002087,1.49e-22,115;CL:0000738,5.39e-22,136;CL:0002031,9.03e-19,120;CL:0000988,7.13e-17,177;CL:0000037,1.84e-16,168;CL:0002032,7.79e-14,161;CL:0000837,7.79e-14,161;CL:0000624,2.19e-09,6;CL:0000784,1.19e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;5.90e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.22e-07!112;UBERON:0002390!8.15e-07!102;UBERON:0003061!8.15e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@ICOSLG | |||
}} |
Revision as of 10:39, 12 September 2013
Short description: | p4@ICOSLG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ICOSLG_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -458bp_to_ENST00000400377_5end |
EntrezGene: | ICOSLG |
HGNC: | 17087 |
UniProt: | A8MUZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.92e-32 | 24 |
pro-B cell | 9.92e-32 | 24 |
lymphocyte | 8.57e-27 | 53 |
common lymphoid progenitor | 8.57e-27 | 53 |
lymphoid lineage restricted progenitor cell | 1.71e-25 | 52 |
B cell | 3.89e-23 | 14 |
nongranular leukocyte | 1.49e-22 | 115 |
leukocyte | 5.39e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 9.03e-19 | 120 |
hematopoietic cell | 7.13e-17 | 177 |
hematopoietic stem cell | 1.84e-16 | 168 |
hematopoietic oligopotent progenitor cell | 7.79e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.79e-14 | 161 |
CD4-positive, alpha-beta T cell | 2.19e-09 | 6 |
plasmacytoid dendritic cell | 1.19e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.