FFCP PHASE1:Hg19::chr22:33255512..33255535,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7078|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=11822|TSSclassifier=S|UniProt=|association_with_transcript=49bp_to_X80791_5end|coexpression_cluster_id=C50|description=CAGE_peak_5_at_TIMP3_5end|id=chr22:33255512..33255535,+|ontology_enrichment_celltype=CL:0000055!1.10e-12!180;CL:0000057!1.13e-08!75;CL:0002334!1.98e-07!12|ontology_enrichment_celltype_v019=CL:0002334;5.02e-09;12|ontology_enrichment_celltype_v019_2=CL:0002334,4.73e-09,12;CL:0000057,5.83e-09,76;CL:0000136,5.19e-08,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!4.36e-10!365;UBERON:0004923!1.50e-09!57;UBERON:0000468!2.04e-08!659;UBERON:0007023!2.38e-07!115;UBERON:0000467!3.18e-07!625;UBERON:0000480!4.60e-07!626|ontology_enrichment_uberon_v019=UBERON:0001013;5.47e-08;14|ontology_enrichment_uberon_v019_2=UBERON:0004923,4.54e-09,66;UBERON:0001013,5.60e-08,14;UBERON:0005631,7.15e-08,14;UBERON:0000158,7.15e-08,14|phase1_expression=3.45188920614058,5.35251309727458,3.66481450649525,23.01685862122,11.1740273606822,30.5318483435129,0,3.15859936713415,1.56711376919903,0.982935746006035,0,5.02415155899396,3.4289707169699,0.123766352960047,0.994192127183747,5.3786011716142,0.602694528023977,2.19093027116212,3.41552959153355,0,0.612002073732759,0.313454721478088,0,0.958120975510189,0.87879847716362,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,1.91793842765295,3.2529523714611,1.00267582127178,3.47631645505977,2.3858578411533,16.5455855902896,0.189069634328136,0.443458794925128,0.175669571386252,2.42311289670768,0.364295288292542,0.370784442784429,0,0.696518949197069,0.26591592103773,0,0,0,0,0,0,0,0,0,0,1.03366703667732,0,1.67360306382335,0.402829317109147,0,1.95249646038536,0,0,0.357198913136319,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,11.9273268406876,5.44511200157693,1.58891016975863,8.89193524321323,2.4826786753885,2.80338800071154,0,2.4666754841716,0.622422070799533,0.269421344139376,0.163461903113459,0.302714855289863,0.576175924479999,3.28050004567315,0.936480230490962,0,0.896692083310806,0.352303495931295,0.323745888736263,0,0.408308342509787,2.08818339430006,1.03325781175765,0,3.4617370098998,0,0,0.168336113954066,0.500474079487857,0,0.438977620880838,2.75839016219118,3.00476117813194,0.453728732640084,6.27863724911017,2.34913127700424,7.2056846394251,12.9039171316293,3.19462840639161,7.72921620136887,5.95573940261087,6.75105328965065,4.18979122193154,6.05841058185875,1.28869858099219,8.24394889775941,6.03516307278244,2.82105875037393,1.18692414617341,0.193260853163297,0,0,0,0,0,0.207322110030741,0,0,3.12899064659632,10.935095949279,1.38134921352481,3.71494342425583,1.44375896333917,0.946454400318751,0.842923450390509,0.964044119533928,1.21323370005633,0.435758888184812,0.71181185733329,0.404493924480493,0.588664395376038,0.769494313892781,2.95262181849859,4.20725321410337,1.2347220339942,1.47008711385542,2.53510069643662,0,4.13552934676983,0,0,0.171567810298526,0.658501712451753,0,0.100528972411631,0.277765335475589,5.53874119027552,0,0,0.115930404975077,0.587043471179108,0.721832238805369,4.62985512576611,3.61482889245737,0.790204397959275,0,0,0.936017060556951,0.148631162288728,0,0,0.283550194484773,0.895585227028483,1.16253575405585,0.383382679165211,1.97065295158377,0.792435906119034,1.86595303986695,2.88239906833923,2.01987893482208,0.253991577168676,4.20187268114105,2.34434894420094,0,5.55268460597947,17.7202404127911,1.14330573052231,2.13049060256185,0,2.0534720029866,3.87815147273333,7.15312891703765,2.535908257668,0,0,0,0,0.532844358032199,1.14382394926518,0,0.823240336780769,2.28015329005615,2.84313558994037,0,0.301439377059586,0,1.99945982364114,0,0,2.10833939483032,0,1.14861935834114,2.85273810081437,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,3.18969375826582,0,0,0,0.12269149171914,0,1.08506009479894,4.99130067673937,14.0958901149758,4.41566762095017,2.10854546986884,3.31040709700491,11.3703752027992,3.10419213877515,1.99267679560631,1.65932251687533,4.86548241021264,3.32861967686659,4.11772108573027,0,0,0,3.94065842880137,3.32870879020994,3.93107381328584,3.47350930946288,2.14846762603287,10.9457436828899,3.97231362692673,13.816095724801,8.68611174175481,17.8101679733989,16.3462275430815,16.6908021794339,2.54594183642808,4.15403543346897,11.504827467536,1.20859449591622,1.80455823272956,0.460404944679482,2.29628896329214,1.0925470080403,0.917870904715969,0,0.0770153371044148,0,0,0,4.54933536283586,1.36074964221213,1.94324324491925,3.08454505380579,0,0.501689773854853,0,0,0,0,0.261435451024901,4.61610225209501,1.9680878741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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=49bp_to_X80791_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_5_at_TIMP3_5end | |||
|id=chr22:33255512..33255535,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-12!180;CL:0000057!1.13e-08!75;CL:0002334!1.98e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;5.02e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,4.73e-09,12;CL:0000057,5.83e-09,76;CL:0000136,5.19e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.36e-10!365;UBERON:0004923!1.50e-09!57;UBERON:0000468!2.04e-08!659;UBERON:0007023!2.38e-07!115;UBERON:0000467!3.18e-07!625;UBERON:0000480!4.60e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.47e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,4.54e-09,66;UBERON:0001013,5.60e-08,14;UBERON:0005631,7.15e-08,14;UBERON:0000158,7.15e-08,14 | |||
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| |||
|short_description=p5@TIMP3 | |||
}} |
Revision as of 11:37, 12 September 2013
Short description: | p5@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 49bp_to_X80791_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 4.73e-09 | 12 |
fibroblast | 5.83e-09 | 76 |
fat cell | 5.19e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 4.54e-09 | 66 |
adipose tissue | 5.60e-08 | 14 |
extraembryonic membrane | 7.15e-08 | 14 |
membranous layer | 7.15e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.