FFCP PHASE1:Hg19::chr2:171036635..171036673,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=140469|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15576|TSSclassifier=W|UniProt=F5H2J1|association_with_transcript=0bp_to_ENST00000334231,ENST00000484338_5end|description=CAGE_peak_2_at_MYO3B_5end|id=chr2:171036635..171036673,+|ontology_enrichment_celltype=CL:0002159!3.09e-10!13;CL:0002076!3.43e-09!43;CL:0000244!4.71e-07!4;CL:0000731!4.71e-07!4|ontology_enrichment_celltype_v019=CL:0002159;2.02e-11;14!CL:0000244;3.94e-09;4!CL:0000731;3.94e-09;4!CL:0000945;1.49e-08;24!CL:0000575;5.83e-08;2!CL:0000317;1.04e-07;2!CL:1000448;1.04e-07;2!CL:0002308;1.04e-07;2!CL:0002536;1.04e-07;2!CL:0002140;1.04e-07;2!CL:0002537;3.85e-07;5|ontology_enrichment_celltype_v019_2=CL:0002159,1.93e-11,14;CL:0000244,4.11e-09,4;CL:0000731,4.11e-09,4;CL:0000945,1.41e-08,24;CL:0000826,1.41e-08,24;CL:0000317,5.54e-08,2;CL:1000448,5.54e-08,2;CL:0002308,5.54e-08,2;CL:0002140,5.54e-08,2;CL:0000575,6.39e-08,2;CL:0002536,8.47e-08,2;CL:0002537,4.29e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060058!5.34e-10!10|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006554!5.44e-10!44;UBERON:0001008!1.25e-09!45;UBERON:0007023!9.76e-08!115;UBERON:0000365!1.23e-07!5;UBERON:0003887!1.43e-07!21;UBERON:0000464!2.18e-07!104;UBERON:0002553!9.51e-07!70|ontology_enrichment_uberon_v019=UBERON:0000305;1.62e-12;7!UBERON:0005631;1.14e-08;10!UBERON:0000158;1.14e-08;10!UBERON:0006554;1.99e-08;30!UBERON:0001008;1.99e-08;30!UBERON:0002419;1.04e-07;2!UBERON:0007771;1.04e-07;2!UBERON:0003297;1.04e-07;2!UBERON:0001821;1.04e-07;2!UBERON:0003487;1.04e-07;2!UBERON:0001820;1.04e-07;2!UBERON:0000365;2.24e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.59e-12,7;UBERON:0004871,6.37e-11,8;UBERON:0002419,5.54e-08,2;UBERON:0007771,5.54e-08,2;UBERON:0003297,5.54e-08,2;UBERON:0001821,5.54e-08,2;UBERON:0003487,5.54e-08,2;UBERON:0001820,5.54e-08,2;UBERON:0005089,5.54e-08,2;UBERON:0005088,5.54e-08,2;UBERON:0000365,2.31e-07,5;UBERON:0006554,2.72e-07,47;UBERON:0001008,4.29e-07,48|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,1.31064823278103,1.84636884759917,0,0,0,0,0,0,0,0,0,0,0,0,4.04991050464142,3.9408282935974,4.25038219093868,0,0,0,0.919421224478927,0,0,0.387336002901508,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05818582500183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47526683910891,2.24803506515239,0.502644862058154,7.03672183204825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.17587489739202,0.850650583454319,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0.0920809889358963,0,0,0,1.80479845162965,4.77495090047372,0.784349769176855,0,0.633309773357254,0,0,0,0,0,0,1.27438136522519,3.3243040357149,0.895499018888713,0,0,0,0,0,0.412164046590889,0,0,1.72279661398852,1.95018073810956,0,0,0,0,0,0,0,0,0,1.32227932288782,0.384380134730212,6.63586104971837,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0,0,0.0941438007767792,0.86101074534246,3.36942951335251,3.10401107475673,4.36474460393223,0.507447609232169,0,0,0.238231775457789,0,0,0.540031437238115,0,0.213648142254946,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,4.29740072527842,3.8605408508243,1.22864280839693,0,0,0,0.659215496907038,0,0,0,0,0,1.72318727645497,0,0.269605053441981,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,3.0510438035132,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0.296521128680622,0.370691816839509,0.104421949505455,0,0,0,2.00700268137233,0.19566461893209,0,3.15667522279512,1.20990716048664,0,0,0,0,0,0,0,0,1.70765727617876,0,4.85967267338367,0.489961987071888,6.18120366720858,15.2012201370566,0,0,0,0,0.193978032976839,0,0,0,0,0.126621591911757,0,0.160317640503067,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0.136203406111576,0.160753148465019,0,0,0,1.5476039091159,0.182248669974074,0.335434687599266,5.75281663284147,8.49764327786969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52407511158336,0,0.157204305099666,0,0.496166021811951,0,3.65377795142688,0.638341257770182,0,0,0,0,2.35581144375351,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,2.8339315265117,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0.785181748008205,0,0.550285795565037,0,0,0,0,0.300841313397029,0,1.56302802246618,0,0,0,0.135075169236789,0,0,0,0,1.09651553371436,0,0,0.383287282918786,0.535701835878287,0.672567444437648,0,0.455324382702595,0.0887023701626388,0.691403925334676,0,0,0,0,0.111231401892069,0.235479278551542,0,0,0,0,0,0,0.158013611732727,0.697448552208751,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,11.2262365586585,0,0,0.894843454382338,0,0,0,0,0,1.45713297917742,0,0,0,0,0.109940516745429,0,0,0,0,0.490296643507811,0,0,0,0,0,0.375935671919414,0.128915775947154,2.89829352182294,0,0.352894871715692,0,0,0.458729283404541,0,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0.0918948995348449,0,1.74291005901951,0.267964130156178,0,0,0.426467963801962,1.66645102024618,0.0645889098360061,0.186224142887574,0,1.46388464039779,1.21270313374932,0,0,0.606168477131288,0.143444410785353,0,0.0814032686109745,0,0,0,0,0.122241444182866,2.84827324821017,0,0,2.8851164307291|short_description=p2@MYO3B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=140469 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15576 | |||
|TSSclassifier=W | |||
|UniProt=F5H2J1 | |||
|association_with_transcript=0bp_to_ENST00000334231,ENST00000484338_5end | |||
|description=CAGE_peak_2_at_MYO3B_5end | |||
|id=chr2:171036635..171036673,+ | |||
|ontology_enrichment_celltype=CL:0002159!3.09e-10!13;CL:0002076!3.43e-09!43;CL:0000244!4.71e-07!4;CL:0000731!4.71e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002159;2.02e-11;14!CL:0000244;3.94e-09;4!CL:0000731;3.94e-09;4!CL:0000945;1.49e-08;24!CL:0000575;5.83e-08;2!CL:0000317;1.04e-07;2!CL:1000448;1.04e-07;2!CL:0002308;1.04e-07;2!CL:0002536;1.04e-07;2!CL:0002140;1.04e-07;2!CL:0002537;3.85e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.93e-11,14;CL:0000244,4.11e-09,4;CL:0000731,4.11e-09,4;CL:0000945,1.41e-08,24;CL:0000826,1.41e-08,24;CL:0000317,5.54e-08,2;CL:1000448,5.54e-08,2;CL:0002308,5.54e-08,2;CL:0002140,5.54e-08,2;CL:0000575,6.39e-08,2;CL:0002536,8.47e-08,2;CL:0002537,4.29e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!5.34e-10!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!5.44e-10!44;UBERON:0001008!1.25e-09!45;UBERON:0007023!9.76e-08!115;UBERON:0000365!1.23e-07!5;UBERON:0003887!1.43e-07!21;UBERON:0000464!2.18e-07!104;UBERON:0002553!9.51e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.62e-12;7!UBERON:0005631;1.14e-08;10!UBERON:0000158;1.14e-08;10!UBERON:0006554;1.99e-08;30!UBERON:0001008;1.99e-08;30!UBERON:0002419;1.04e-07;2!UBERON:0007771;1.04e-07;2!UBERON:0003297;1.04e-07;2!UBERON:0001821;1.04e-07;2!UBERON:0003487;1.04e-07;2!UBERON:0001820;1.04e-07;2!UBERON:0000365;2.24e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.59e-12,7;UBERON:0004871,6.37e-11,8;UBERON:0002419,5.54e-08,2;UBERON:0007771,5.54e-08,2;UBERON:0003297,5.54e-08,2;UBERON:0001821,5.54e-08,2;UBERON:0003487,5.54e-08,2;UBERON:0001820,5.54e-08,2;UBERON:0005089,5.54e-08,2;UBERON:0005088,5.54e-08,2;UBERON:0000365,2.31e-07,5;UBERON:0006554,2.72e-07,47;UBERON:0001008,4.29e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,1.31064823278103,1.84636884759917,0,0,0,0,0,0,0,0,0,0,0,0,4.04991050464142,3.9408282935974,4.25038219093868,0,0,0,0.919421224478927,0,0,0.387336002901508,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05818582500183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44076983047484,2.18577172975525,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.272746120590835,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47526683910891,2.24803506515239,0.502644862058154,7.03672183204825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.17587489739202,0.850650583454319,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60405176242628,0.0920809889358963,0,0,0,1.80479845162965,4.77495090047372,0.784349769176855,0,0.633309773357254,0,0,0,0,0,0,1.27438136522519,3.3243040357149,0.895499018888713,0,0,0,0,0,0.412164046590889,0,0,1.72279661398852,1.95018073810956,0,0,0,0,0,0,0,0,0,1.32227932288782,0.384380134730212,6.63586104971837,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0,0,0.0941438007767792,0.86101074534246,3.36942951335251,3.10401107475673,4.36474460393223,0.507447609232169,0,0,0.238231775457789,0,0,0.540031437238115,0,0.213648142254946,0,0,0.743212700502875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,4.29740072527842,3.8605408508243,1.22864280839693,0,0,0,0.659215496907038,0,0,0,0,0,1.72318727645497,0,0.269605053441981,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,3.0510438035132,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0.296521128680622,0.370691816839509,0.104421949505455,0,0,0,2.00700268137233,0.19566461893209,0,3.15667522279512,1.20990716048664,0,0,0,0,0,0,0,0,1.70765727617876,0,4.85967267338367,0.489961987071888,6.18120366720858,15.2012201370566,0,0,0,0,0.193978032976839,0,0,0,0,0.126621591911757,0,0.160317640503067,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0.136203406111576,0.160753148465019,0,0,0,1.5476039091159,0.182248669974074,0.335434687599266,5.75281663284147,8.49764327786969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52407511158336,0,0.157204305099666,0,0.496166021811951,0,3.65377795142688,0.638341257770182,0,0,0,0,2.35581144375351,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,2.8339315265117,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0.785181748008205,0,0.550285795565037,0,0,0,0,0.300841313397029,0,1.56302802246618,0,0,0,0.135075169236789,0,0,0,0,1.09651553371436,0,0,0.383287282918786,0.535701835878287,0.672567444437648,0,0.455324382702595,0.0887023701626388,0.691403925334676,0,0,0,0,0.111231401892069,0.235479278551542,0,0,0,0,0,0,0.158013611732727,0.697448552208751,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,11.2262365586585,0,0,0.894843454382338,0,0,0,0,0,1.45713297917742,0,0,0,0,0.109940516745429,0,0,0,0,0.490296643507811,0,0,0,0,0,0.375935671919414,0.128915775947154,2.89829352182294,0,0.352894871715692,0,0,0.458729283404541,0,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0.0918948995348449,0,1.74291005901951,0.267964130156178,0,0,0.426467963801962,1.66645102024618,0.0645889098360061,0.186224142887574,0,1.46388464039779,1.21270313374932,0,0,0.606168477131288,0.143444410785353,0,0.0814032686109745,0,0,0,0,0.122241444182866,2.84827324821017,0,0,2.8851164307291 | |||
|short_description=p2@MYO3B | |||
}} | |||
Revision as of 14:37, 12 September 2013
| Short description: | p2@MYO3B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_MYO3B_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000334231, ENST00000484338_5end |
| EntrezGene: | MYO3B |
| HGNC: | 15576 |
| UniProt: | F5H2J1 |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| general ecto-epithelial cell | 1.93e-11 | 14 |
| transitional epithelial cell | 4.11e-09 | 4 |
| urothelial cell | 4.11e-09 | 4 |
| lymphocyte of B lineage | 1.41e-08 | 24 |
| pro-B cell | 1.41e-08 | 24 |
| sebum secreting cell | 5.54e-08 | 2 |
| epithelial cell of sweat gland | 5.54e-08 | 2 |
| epithelial cell of skin gland | 5.54e-08 | 2 |
| acinar cell of sebaceous gland | 5.54e-08 | 2 |
| corneal epithelial cell | 6.39e-08 | 2 |
| amniotic epithelial cell | 8.47e-08 | 2 |
| amnion mesenchymal stem cell | 4.29e-07 | 5 |
| Ontology term | p-value | n |
|---|---|---|
| amnion | 1.59e-12 | 7 |
| somatic layer of lateral plate mesoderm | 6.37e-11 | 8 |
| skin gland | 5.54e-08 | 2 |
| epidermis gland | 5.54e-08 | 2 |
| gland of integumental system | 5.54e-08 | 2 |
| sebaceous gland | 5.54e-08 | 2 |
| skin sebaceous gland | 5.54e-08 | 2 |
| sweat gland | 5.54e-08 | 2 |
| sweat gland placode | 5.54e-08 | 2 |
| sebaceous gland placode | 5.54e-08 | 2 |
| urothelium | 2.31e-07 | 5 |
| urinary system structure | 2.72e-07 | 47 |
| renal system | 4.29e-07 | 48 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
