FFCP PHASE1:Mm9::chr10:116725548..116725582,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1008|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:116725548..116725582,-|id=chr10:116725548..116725582,-|ontology_enrichment_celltype=CL:0002563!5.36e-15!9;CL:0002251!5.36e-15!9;CL:0000239!1.85e-09!6;CL:0000677!1.85e-09!6;CL:0000212!1.85e-09!6;CL:0000584!1.85e-09!6;CL:0000066!4.93e-09!25;CL:0002076!1.87e-08!15;CL:0000075!4.70e-08!7;CL:0000473!5.06e-08!3;CL:0000627!5.06e-08!3;CL:0000682!5.06e-08!3;CL:0002250!3.30e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,1.18e-12,3;CL:0002563,2.96e-07,9;CL:0002251,2.96e-07,9;CL:0000066,4.60e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.02e-27!15;UBERON:0001242!2.69e-23!13;UBERON:0000060!2.69e-23!13;UBERON:0001262!2.69e-23!13;UBERON:0004786!2.69e-23!13;UBERON:0000160!4.96e-16!43;UBERON:0004923!6.69e-16!24;UBERON:0003350!5.36e-15!9;UBERON:0004808!5.36e-15!9;UBERON:0001277!5.36e-15!9;UBERON:0000485!5.07e-12!11;UBERON:0002048!5.09e-11!14;UBERON:0000117!5.09e-11!14;UBERON:0000171!5.09e-11!14;UBERON:0000170!5.09e-11!14;UBERON:0005597!5.09e-11!14;UBERON:0000118!5.09e-11!14;UBERON:0005409!2.00e-10!59;UBERON:0001007!7.20e-10!128;UBERON:0001555!7.20e-10!128;UBERON:0007026!7.20e-10!128;UBERON:0004119!1.30e-09!130;UBERON:0000925!1.30e-09!130;UBERON:0006595!1.30e-09!130;UBERON:0005153!8.56e-09!17;UBERON:0005178!8.56e-09!17;UBERON:0005181!8.56e-09!17;UBERON:0002224!8.56e-09!17;UBERON:0000915!8.56e-09!17;UBERON:0008947!8.56e-09!17;UBERON:0003258!8.56e-09!17;UBERON:0000331!2.63e-08!3;UBERON:0002116!2.63e-08!3;UBERON:0001204!2.63e-08!3;UBERON:0001168!2.63e-08!3;UBERON:0004921!2.81e-08!126;UBERON:0004185!2.81e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.99e-24,31;UBERON:0000344,2.63e-20,15;UBERON:0002108,5.12e-17,4;UBERON:0005409,4.46e-15,47;UBERON:0001242,1.49e-14,13;UBERON:0001262,1.49e-14,13;UBERON:0004786,1.49e-14,13;UBERON:0000331,3.87e-13,3;UBERON:0002116,3.87e-13,3;UBERON:0001204,3.87e-13,3;UBERON:0001168,3.87e-13,3;UBERON:0004923,3.31e-12,24;UBERON:0001962,1.41e-08,2;UBERON:0001961,1.41e-08,2;UBERON:0001744,1.41e-08,2;UBERON:0001007,1.93e-08,116;UBERON:0001555,1.93e-08,116;UBERON:0007026,1.93e-08,116;UBERON:0004119,3.04e-08,118;UBERON:0000925,3.04e-08,118;UBERON:0006595,3.04e-08,118;UBERON:0003350,2.96e-07,9;UBERON:0004808,2.96e-07,9;UBERON:0001277,2.96e-07,9|phase1_expression=0,0.697950815278722,1.36499771816861,0,0.500895729946347,4.19698179779725,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.83527424853736,1.14846392823004,6.03066794622705,5.60225204983311,11.9714754257516,6.5527833737582,3.32595765982957,0,0,0,0.288851619751275,4.82080471539628,0.612508068787107,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.9757883427427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,3.70230793328962,0,0,0,0,0,0,18.9811624617805,0,0,0,0,9.88701349519644,18.8040103390984,12.9441827615339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0.476087281772027,2.73187107000918,0.472905432318573,0.8858587585951,0.478364305972461,0.983179888294428,0.345369963731791,1.01254341007058,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:116725548..116725582,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1008 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:116725548..116725582,- | |||
|id=chr10:116725548..116725582,- | |||
|ontology_enrichment_celltype=CL:0002563!5.36e-15!9;CL:0002251!5.36e-15!9;CL:0000239!1.85e-09!6;CL:0000677!1.85e-09!6;CL:0000212!1.85e-09!6;CL:0000584!1.85e-09!6;CL:0000066!4.93e-09!25;CL:0002076!1.87e-08!15;CL:0000075!4.70e-08!7;CL:0000473!5.06e-08!3;CL:0000627!5.06e-08!3;CL:0000682!5.06e-08!3;CL:0002250!3.30e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.18e-12,3;CL:0002563,2.96e-07,9;CL:0002251,2.96e-07,9;CL:0000066,4.60e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.02e-27!15;UBERON:0001242!2.69e-23!13;UBERON:0000060!2.69e-23!13;UBERON:0001262!2.69e-23!13;UBERON:0004786!2.69e-23!13;UBERON:0000160!4.96e-16!43;UBERON:0004923!6.69e-16!24;UBERON:0003350!5.36e-15!9;UBERON:0004808!5.36e-15!9;UBERON:0001277!5.36e-15!9;UBERON:0000485!5.07e-12!11;UBERON:0002048!5.09e-11!14;UBERON:0000117!5.09e-11!14;UBERON:0000171!5.09e-11!14;UBERON:0000170!5.09e-11!14;UBERON:0005597!5.09e-11!14;UBERON:0000118!5.09e-11!14;UBERON:0005409!2.00e-10!59;UBERON:0001007!7.20e-10!128;UBERON:0001555!7.20e-10!128;UBERON:0007026!7.20e-10!128;UBERON:0004119!1.30e-09!130;UBERON:0000925!1.30e-09!130;UBERON:0006595!1.30e-09!130;UBERON:0005153!8.56e-09!17;UBERON:0005178!8.56e-09!17;UBERON:0005181!8.56e-09!17;UBERON:0002224!8.56e-09!17;UBERON:0000915!8.56e-09!17;UBERON:0008947!8.56e-09!17;UBERON:0003258!8.56e-09!17;UBERON:0000331!2.63e-08!3;UBERON:0002116!2.63e-08!3;UBERON:0001204!2.63e-08!3;UBERON:0001168!2.63e-08!3;UBERON:0004921!2.81e-08!126;UBERON:0004185!2.81e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.99e-24,31;UBERON:0000344,2.63e-20,15;UBERON:0002108,5.12e-17,4;UBERON:0005409,4.46e-15,47;UBERON:0001242,1.49e-14,13;UBERON:0001262,1.49e-14,13;UBERON:0004786,1.49e-14,13;UBERON:0000331,3.87e-13,3;UBERON:0002116,3.87e-13,3;UBERON:0001204,3.87e-13,3;UBERON:0001168,3.87e-13,3;UBERON:0004923,3.31e-12,24;UBERON:0001962,1.41e-08,2;UBERON:0001961,1.41e-08,2;UBERON:0001744,1.41e-08,2;UBERON:0001007,1.93e-08,116;UBERON:0001555,1.93e-08,116;UBERON:0007026,1.93e-08,116;UBERON:0004119,3.04e-08,118;UBERON:0000925,3.04e-08,118;UBERON:0006595,3.04e-08,118;UBERON:0003350,2.96e-07,9;UBERON:0004808,2.96e-07,9;UBERON:0001277,2.96e-07,9 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,0,0.500895729946347,4.19698179779725,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.83527424853736,1.14846392823004,6.03066794622705,5.60225204983311,11.9714754257516,6.5527833737582,3.32595765982957,0,0,0,0.288851619751275,4.82080471539628,0.612508068787107,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,3.53970027129086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.9757883427427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,3.70230793328962,0,0,0,0,0,0,18.9811624617805,0,0,0,0,9.88701349519644,18.8040103390984,12.9441827615339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0.476087281772027,2.73187107000918,0.472905432318573,0.8858587585951,0.478364305972461,0.983179888294428,0.345369963731791,1.01254341007058,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:116725548..116725582,- | |||
}} |
Revision as of 15:50, 12 September 2013
Short description: | p@chr10:116725548..116725582, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:116725548..116725582, - |
Coexpression cluster: | MCL_coexpression_mm9:1008 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.18e-12 | 3 |
intestinal epithelial cell | 2.96e-07 | 9 |
epithelial cell of alimentary canal | 2.96e-07 | 9 |
epithelial cell | 4.60e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.99e-24 | 31 |
mucosa | 2.63e-20 | 15 |
small intestine | 5.12e-17 | 4 |
gastrointestinal system | 4.46e-15 | 47 |
intestinal mucosa | 1.49e-14 | 13 |
wall of intestine | 1.49e-14 | 13 |
gastrointestinal system mucosa | 1.49e-14 | 13 |
ileal mucosa | 3.87e-13 | 3 |
ileum | 3.87e-13 | 3 |
mucosa of small intestine | 3.87e-13 | 3 |
wall of small intestine | 3.87e-13 | 3 |
organ component layer | 3.31e-12 | 24 |
gut-associated lymphoid tissue | 1.41e-08 | 2 |
mucosa-associated lymphoid tissue | 1.41e-08 | 2 |
lymphoid tissue | 1.41e-08 | 2 |
digestive system | 1.93e-08 | 116 |
digestive tract | 1.93e-08 | 116 |
primitive gut | 1.93e-08 | 116 |
endoderm-derived structure | 3.04e-08 | 118 |
endoderm | 3.04e-08 | 118 |
presumptive endoderm | 3.04e-08 | 118 |
epithelium of mucosa | 2.96e-07 | 9 |
gastrointestinal system epithelium | 2.96e-07 | 9 |
intestinal epithelium | 2.96e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.